BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004610
         (2592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi...  1221   0.0  
ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloropla...  1199   0.0  
ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloropla...  1198   0.0  
ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloropla...  1198   0.0  
sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease...  1195   0.0  

>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4A, chloroplastic-like [Vitis vinifera]
          Length = 923

 Score = 1221 bits (3160), Expect = 0.0
 Identities = 642/771 (83%), Positives = 665/771 (86%)
 Frame = +3

Query: 279  KSSKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSKVE 458
            + S+  K++ +M CNV  P L            RGF+GLRG NALD LV SG DFHS+V 
Sbjct: 24   QGSERTKKSVKMMCNVQAPGLRI----------RGFSGLRGANALDNLVRSGHDFHSRVA 73

Query: 459  ISMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXX 638
             ++ +  G+ SRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFV               
Sbjct: 74   AAISVRGGKASRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG 133

Query: 639  XAAKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYI 818
             AAKVLK+MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYI
Sbjct: 134  IAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYI 193

Query: 819  GSXXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXNKMP 998
            GS             VAAR LENLGADP+NIRTQVIRMV                 NKMP
Sbjct: 194  GSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGTTGNKMP 253

Query: 999  TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL 1178
            TLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL
Sbjct: 254  TLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGL 313

Query: 1179 AQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 1358
            AQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV
Sbjct: 314  AQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEV 373

Query: 1359 HTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 1538
            HTL               LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE
Sbjct: 374  HTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPE 433

Query: 1539 PTVDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEAGSR 1718
            P+VDET+QILKGLRERYEIHHKLRYTDEAL +AA LSYQYISDRFLPDKAIDLIDEAGSR
Sbjct: 434  PSVDETIQILKGLRERYEIHHKLRYTDEALVSAARLSYQYISDRFLPDKAIDLIDEAGSR 493

Query: 1719 VRLRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLIDKGK 1898
            VRLR AQLPEEARELEKELRQITKEKNEA R QDFEKAGELRD+E+DLK QI +LIDKGK
Sbjct: 494  VRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMDLKAQISTLIDKGK 553

Query: 1899 EKTKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIGQDE 2078
            E TKAE EAGD GP+VTEVDIQHIVS+WTGIPV+KVSTDES RLLKMEE LH RVIGQDE
Sbjct: 554  EMTKAETEAGDIGPMVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDE 613

Query: 2079 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMS 2258
            AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMS
Sbjct: 614  AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 673

Query: 2259 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 2438
            EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE
Sbjct: 674  EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 733

Query: 2439 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 2591
            DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN
Sbjct: 734  DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 784


>ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
            sativus] gi|449505877|ref|XP_004162592.1| PREDICTED:
            chaperone protein ClpC, chloroplastic-like [Cucumis
            sativus]
          Length = 924

 Score = 1199 bits (3101), Expect = 0.0
 Identities = 634/773 (82%), Positives = 662/773 (85%), Gaps = 1/773 (0%)
 Frame = +3

Query: 273  SGKSSKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSK 452
            S + S N K+  +M  +V +P +  +S          F+GLRG N+LD +   G DFHSK
Sbjct: 22   SSRGSGNAKRVVKMMSSVHSPGMRMRS----------FSGLRGLNSLDNMFRPGQDFHSK 71

Query: 453  VEISMRLPRG-RGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXX 629
            V I++   RG R SR V RAMFERFTEKAIKVIMLAQEEARRLGHNFV            
Sbjct: 72   VAIAISSRRGGRPSRGVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGE 131

Query: 630  XXXXAAKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGH 809
                AAKVLK+MGINLKDARVEVEKIIGRG GFVAVEIPFTPRAKRVLELSLEEARQLGH
Sbjct: 132  GTGIAAKVLKSMGINLKDARVEVEKIIGRGGGFVAVEIPFTPRAKRVLELSLEEARQLGH 191

Query: 810  NYIGSXXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXN 989
            NYIGS             VAAR LENLGADP NIRTQVIRMV                 N
Sbjct: 192  NYIGSEHLLLGLLREGEGVAARVLENLGADPANIRTQVIRMVGESTEAVGAGVGGGSSGN 251

Query: 990  KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIA 1169
            KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIA
Sbjct: 252  KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIA 311

Query: 1170 EGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 1349
            EGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI
Sbjct: 312  EGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFI 371

Query: 1350 DEVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 1529
            DEVHTL               LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVK
Sbjct: 372  DEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVK 431

Query: 1530 VPEPTVDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEA 1709
            VPEP+VDET+QILKGLRERYEIHHKLRYTDEALEAAA LSYQYISDRFLPDKAIDLIDEA
Sbjct: 432  VPEPSVDETIQILKGLRERYEIHHKLRYTDEALEAAAQLSYQYISDRFLPDKAIDLIDEA 491

Query: 1710 GSRVRLRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLID 1889
            GSRVRLR AQLPEEA+E+EKELRQITKEKN+A R QDFEKAGELRD+E++LK +I +LID
Sbjct: 492  GSRVRLRHAQLPEEAKEVEKELRQITKEKNDAVRSQDFEKAGELRDREMELKAKISALID 551

Query: 1890 KGKEKTKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIG 2069
            KGKE +KAE+EAGD GPVVTEVDIQHIVSSWTGIPV+KVSTDES RLLKMEE LH RVIG
Sbjct: 552  KGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHRRVIG 611

Query: 2070 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRL 2249
            QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRL
Sbjct: 612  QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 671

Query: 2250 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 2429
            DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ
Sbjct: 672  DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 731

Query: 2430 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 2588
            ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR+GFDLDYDEKDSSY
Sbjct: 732  ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRMGFDLDYDEKDSSY 784


>ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1
            [Glycine max] gi|356508863|ref|XP_003523173.1| PREDICTED:
            chaperone protein ClpC, chloroplastic-like isoform 2
            [Glycine max]
          Length = 922

 Score = 1198 bits (3100), Expect = 0.0
 Identities = 630/773 (81%), Positives = 656/773 (84%)
 Frame = +3

Query: 273  SGKSSKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSK 452
            SGK  ++ K    +R N               +   GF+GLR  N LDT++  GIDFHSK
Sbjct: 26   SGKLKRSTKMMSALRTN--------------GLRMSGFSGLRTFNPLDTMLRPGIDFHSK 71

Query: 453  VEISMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 632
            V I+    R R +RCV +AMFERFTEKAIKVIMLAQEEARRLGHNFV             
Sbjct: 72   VSIATSSRRARATRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 131

Query: 633  XXXAAKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN 812
               AAKVLK+MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN
Sbjct: 132  TGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN 191

Query: 813  YIGSXXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXNK 992
            YIGS             VAAR LENLGADP NIRTQVIRMV                 NK
Sbjct: 192  YIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVTATVGSGSSGNK 251

Query: 993  MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE 1172
            MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE
Sbjct: 252  MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE 311

Query: 1173 GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 1352
            GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID
Sbjct: 312  GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 371

Query: 1353 EVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 1532
            EVHTL               LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV
Sbjct: 372  EVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 431

Query: 1533 PEPTVDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEAG 1712
            PEPTVDET+QILKGLRERYEIHHKLRYTDEAL AAA LSYQYISDRFLPDKAIDLIDEAG
Sbjct: 432  PEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAG 491

Query: 1713 SRVRLRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLIDK 1892
            SRVRL+ AQLPEEAREL+KE+RQI KEK EA R QDFEKAGELRD+E+DLK QI +L++K
Sbjct: 492  SRVRLQHAQLPEEARELDKEVRQIIKEKEEAVRNQDFEKAGELRDREMDLKAQISTLVEK 551

Query: 1893 GKEKTKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIGQ 2072
            GKE +KAE+EAGD+ PVVTE DIQHIVSSWTGIPV+KVSTDES RLLKMEE LH RVIGQ
Sbjct: 552  GKEMSKAESEAGDASPVVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 611

Query: 2073 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLD 2252
            DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLD
Sbjct: 612  DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 671

Query: 2253 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 2432
            MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI
Sbjct: 672  MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 731

Query: 2433 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 2591
            LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEKDSSYN
Sbjct: 732  LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYN 784


>ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
          Length = 922

 Score = 1198 bits (3099), Expect = 0.0
 Identities = 629/773 (81%), Positives = 655/773 (84%)
 Frame = +3

Query: 273  SGKSSKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSK 452
            SGK  ++ K    +R N               +   GF+GLR  N LDT++  GIDFHSK
Sbjct: 26   SGKLKRSTKMMSALRTN--------------GLRMSGFSGLRTFNPLDTMLRPGIDFHSK 71

Query: 453  VEISMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 632
            V I+    + R +RCV +AMFERFTEKAIKVIMLAQEEARRLGHNFV             
Sbjct: 72   VSIATSSRQARATRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 131

Query: 633  XXXAAKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN 812
               AAKVLK+MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN
Sbjct: 132  TGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHN 191

Query: 813  YIGSXXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXNK 992
            YIGS             VAAR LENLGADP NIRTQVIRMV                 NK
Sbjct: 192  YIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVTATVGSGSSGNK 251

Query: 993  MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE 1172
            MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE
Sbjct: 252  MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAE 311

Query: 1173 GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 1352
            GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID
Sbjct: 312  GLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 371

Query: 1353 EVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 1532
            EVHTL               LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV
Sbjct: 372  EVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 431

Query: 1533 PEPTVDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEAG 1712
            PEPTVDET+QILKGLRERYEIHHKLRYTDEAL AAA LSYQYISDRFLPDKAIDLIDEAG
Sbjct: 432  PEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAG 491

Query: 1713 SRVRLRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLIDK 1892
            SRVRL+ AQLPEEAREL+KE+RQI KEK EA R QDFEKAGELRD+E+DLK QI +L++K
Sbjct: 492  SRVRLQHAQLPEEARELDKEVRQIIKEKEEAVRNQDFEKAGELRDREMDLKAQISTLVEK 551

Query: 1893 GKEKTKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIGQ 2072
            GKE +KAE EAGD GP+VTE DIQHIVSSWTGIPV+KVSTDES RLLKMEE LH RVIGQ
Sbjct: 552  GKEMSKAETEAGDEGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 611

Query: 2073 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLD 2252
            DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLD
Sbjct: 612  DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 671

Query: 2253 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 2432
            MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI
Sbjct: 672  MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 731

Query: 2433 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 2591
            LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEKDSSYN
Sbjct: 732  LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYN 784


>sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4B, chloroplastic; Flags: Precursor
            gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
            [Solanum lycopersicum]
          Length = 923

 Score = 1195 bits (3091), Expect = 0.0
 Identities = 632/769 (82%), Positives = 653/769 (84%)
 Frame = +3

Query: 285  SKNKKQTFQMRCNVPTPRLGFKSLSLISIGYRGFTGLRGTNALDTLVNSGIDFHSKVEIS 464
            S   K+   M CN  +           S+  R FTGLRG NA+DTLV SG    SKV  +
Sbjct: 26   SGKTKRAVTMLCNAQSS----------SLTLRDFTGLRGCNAIDTLVRSGETLQSKVAAA 75

Query: 465  MRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXA 644
              + R RG R V +AMFERFTEKAIKVIMLAQEEARRLGHNFV                A
Sbjct: 76   TYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIA 135

Query: 645  AKVLKTMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS 824
            AKVLK+MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS
Sbjct: 136  AKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS 195

Query: 825  XXXXXXXXXXXXXVAARTLENLGADPNNIRTQVIRMVXXXXXXXXXXXXXXXXXNKMPTL 1004
                         VAAR LENLGADP+NIRTQVIRMV                  KMPTL
Sbjct: 196  EHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESNEAVGASVGGGTSGQKMPTL 255

Query: 1005 EEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 1184
            EEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ
Sbjct: 256  EEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 315

Query: 1185 RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 1364
            RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT
Sbjct: 316  RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 375

Query: 1365 LXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPT 1544
            L               LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPT
Sbjct: 376  LIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPT 435

Query: 1545 VDETVQILKGLRERYEIHHKLRYTDEALEAAAHLSYQYISDRFLPDKAIDLIDEAGSRVR 1724
            VDET+QILKGLRERYEIHHKLRYTDE L AAA LSYQYISDRFLPDKAIDLIDEAGSRVR
Sbjct: 436  VDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVR 495

Query: 1725 LRDAQLPEEARELEKELRQITKEKNEAARGQDFEKAGELRDKELDLKNQIVSLIDKGKEK 1904
            LR AQLPEEA+ELEKELRQITKEKNEA RGQDFEKAGELRD+E+DLK QI +LIDK KE 
Sbjct: 496  LRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEV 555

Query: 1905 TKAENEAGDSGPVVTEVDIQHIVSSWTGIPVDKVSTDESGRLLKMEEQLHNRVIGQDEAV 2084
            +KAE+EA D+GP+VTE DIQHIVSSWTGIPV+KVSTDES RLLKMEE LH R+IGQDEAV
Sbjct: 556  SKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAV 615

Query: 2085 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEF 2264
            KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEF
Sbjct: 616  KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 675

Query: 2265 MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 2444
            MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG
Sbjct: 676  MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 735

Query: 2445 RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYN 2591
            RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD DEKDSSYN
Sbjct: 736  RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYN 784