BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004593
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   477   e-132
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   430   e-118
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   430   e-118
ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinu...   429   e-118
ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2...   425   e-116

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  477 bits (1228), Expect = e-132
 Identities = 263/448 (58%), Positives = 311/448 (69%), Gaps = 4/448 (0%)
 Frame = +1

Query: 73   ENGGKHVDVLGEPSSLSALKAAFESLAGKHPPNADSDVLDISDPPSTKG-CSISPPFVAE 249
            E+ G  VD+LGE  SL++LKAAF++LAGK   N +S   ++   P T G CS        
Sbjct: 718  EDDGNLVDILGEDRSLASLKAAFDALAGKTAINHNSKGEEVV--PDTPGRCSDQSNPNMG 775

Query: 250  EKPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEGERLVVVATNVAETSLTIPGIKY 429
            +K  G +   AG L VLPLYAMLPAAAQLRVF+++KEGERLVVVATNVAETSLTIPGIKY
Sbjct: 776  KKRDGENDLSAGALCVLPLYAMLPAAAQLRVFEEIKEGERLVVVATNVAETSLTIPGIKY 835

Query: 430  VVDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLYSKAAFSNIFL 609
            VVDTGREKVK Y+ +NGME Y+VQWISK              PG+CYRLYS A F+NI  
Sbjct: 836  VVDTGREKVKNYDHSNGMETYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNILP 895

Query: 610  EFSTAEISKIPVDGVVLLMKSMGIDKVANXXXXXXXXXXXXXXXXRCLKSLEALDNFGRL 789
            +FS AEI K+PV+GV+LLMKSM IDKVAN                RCLK+LEAL++ GRL
Sbjct: 896  DFSMAEILKVPVEGVILLMKSMDIDKVANFPFPTPPDAIALAEAERCLKALEALNSKGRL 955

Query: 790  SLLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYXXXXXXXLSLSNPFIMQS 969
            + LGKAMA YPMSPRHSRMLLTVIQI+ K +GYA+ NLV GY       LSL NPF+MQ 
Sbjct: 956  TPLGKAMAHYPMSPRHSRMLLTVIQIMRKAKGYARANLVLGYAVAAAAALSLPNPFVMQF 1015

Query: 970  GGSGGDKNDLQQNENSGTSGTQKRLDQXXXXXXXXXXXXXXXXRAKFCNPSSDALSIAYA 1149
             G+    + L Q E + T  T + +D+                RAKF NPSSDAL++AYA
Sbjct: 1016 EGNHTRNDGLDQVEKANTPVTDEIVDKQDKLKKKKLKETAKVSRAKFSNPSSDALTVAYA 1075

Query: 1150 LQLFELAESPVEFCNENALFFKTMEEMSKLRKQLLRLVFHQK---STHQEFLWTHGPLED 1320
            LQ FEL+ SPVEFCNEN +  KT+EEMSKLRKQLL+LVF+Q    + H+EF W HG +ED
Sbjct: 1076 LQCFELSGSPVEFCNENVMHLKTLEEMSKLRKQLLQLVFNQSTIGALHEEFSWPHGTMED 1135

Query: 1321 VEQAWRVSSDKHPLSMYEEELLGQAICA 1404
             E AWRVSSDKHPLS+ EEELLGQAICA
Sbjct: 1136 TEHAWRVSSDKHPLSLNEEELLGQAICA 1163


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  430 bits (1105), Expect = e-118
 Identities = 244/448 (54%), Positives = 301/448 (67%), Gaps = 4/448 (0%)
 Frame = +1

Query: 73   ENGGKHVDVLGEPSSLSALKAAFESLAGKHPPNADSDVLDISDPPSTKGCSISPPFVAEE 252
            E  G   DV+ + +S+S+LKAAF++L  K+  + D   +D +              + E 
Sbjct: 641  ETDGNLTDVVMDDASMSSLKAAFDALDRKNALDLDKRQVDHTTDEDLSSKQCVSARLKEN 700

Query: 253  KPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEGERLVVVATNVAETSLTIPGIKYV 432
               G SV   G LHVLPLYAMLPAAAQLRVF++VKEGERLVVVATNVAETSLTIPGIKYV
Sbjct: 701  VEFGFSV---GALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYV 757

Query: 433  VDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLYSKAAFSNIFLE 612
            VDTGREKVK YNS+NG+E Y+VQWISK              PG+CYRLYS A FSN   +
Sbjct: 758  VDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPD 817

Query: 613  FSTAEISKIPVDGVVLLMKSMGIDKVANXXXXXXXXXXXXXXXXRCLKSLEALDNFGRLS 792
            FS AEI+KIPVDGVVLLMKSMGI KV N                 CLK+LEALD+ GRL+
Sbjct: 818  FSLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLT 877

Query: 793  LLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYXXXXXXXLSLSNPFIMQSG 972
             LGKAMAQYP+SPRHSRMLLTVIQI+  ++ Y + NLV  Y       LS+SNPF+M   
Sbjct: 878  ALGKAMAQYPLSPRHSRMLLTVIQIMRNLKNYDRANLVLAYSVAAAAALSMSNPFVMMFE 937

Query: 973  GSGGDKNDLQQNENS-GTSGTQKRLDQXXXXXXXXXXXXXXXXRAKFCNPSSDALSIAYA 1149
            GS    ++++QN+ S G + T++++++                R KF + SSDAL++AYA
Sbjct: 938  GS-QINDEVEQNDRSFGDTKTEEKVEK---SLKKKLKEAGKLSREKFSDHSSDALTVAYA 993

Query: 1150 LQLFELAESPVEFCNENALFFKTMEEMSKLRKQLLRLVF-HQKST--HQEFLWTHGPLED 1320
            LQ FE +E+PV FCN   L  KTM+EMSKLRKQLL+LVF H +S+    EF WT+G LED
Sbjct: 994  LQCFEHSETPVAFCNNFTLHLKTMQEMSKLRKQLLKLVFNHSRSSIAESEFSWTNGVLED 1053

Query: 1321 VEQAWRVSSDKHPLSMYEEELLGQAICA 1404
            VE  WRV S+KHPLS+ E+E++GQAICA
Sbjct: 1054 VEAMWRVPSNKHPLSLKEKEIIGQAICA 1081


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  430 bits (1105), Expect = e-118
 Identities = 244/448 (54%), Positives = 301/448 (67%), Gaps = 4/448 (0%)
 Frame = +1

Query: 73   ENGGKHVDVLGEPSSLSALKAAFESLAGKHPPNADSDVLDISDPPSTKGCSISPPFVAEE 252
            E  G   DV+ + +S+S+LKAAF++L  K+  + D   +D +              + E 
Sbjct: 641  ETDGNLTDVVMDDASMSSLKAAFDALDRKNALDLDKRQVDHTTDEDLSSKQCVSARLKEN 700

Query: 253  KPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEGERLVVVATNVAETSLTIPGIKYV 432
               G SV   G LHVLPLYAMLPAAAQLRVF++VKEGERLVVVATNVAETSLTIPGIKYV
Sbjct: 701  VEFGFSV---GALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYV 757

Query: 433  VDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLYSKAAFSNIFLE 612
            VDTGREKVK YNS+NG+E Y+VQWISK              PG+CYRLYS A FSN   +
Sbjct: 758  VDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPD 817

Query: 613  FSTAEISKIPVDGVVLLMKSMGIDKVANXXXXXXXXXXXXXXXXRCLKSLEALDNFGRLS 792
            FS AEI+KIPVDGVVLLMKSMGI KV N                 CLK+LEALD+ GRL+
Sbjct: 818  FSLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLT 877

Query: 793  LLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYXXXXXXXLSLSNPFIMQSG 972
             LGKAMAQYP+SPRHSRMLLTVIQI+  ++ Y + NLV  Y       LS+SNPF+M   
Sbjct: 878  ALGKAMAQYPLSPRHSRMLLTVIQIMRNLKNYDRANLVLAYSVAAAAALSMSNPFVMMFE 937

Query: 973  GSGGDKNDLQQNENS-GTSGTQKRLDQXXXXXXXXXXXXXXXXRAKFCNPSSDALSIAYA 1149
            GS    ++++QN+ S G + T++++++                R KF + SSDAL++AYA
Sbjct: 938  GS-QINDEVEQNDRSFGDTKTEEKVEK---SLKKKLKEAGKLSREKFSDHSSDALTVAYA 993

Query: 1150 LQLFELAESPVEFCNENALFFKTMEEMSKLRKQLLRLVF-HQKST--HQEFLWTHGPLED 1320
            LQ FE +E+PV FCN   L  KTM+EMSKLRKQLL+LVF H +S+    EF WT+G LED
Sbjct: 994  LQCFEHSETPVAFCNNFTLHLKTMQEMSKLRKQLLKLVFNHSRSSIAESEFSWTNGVLED 1053

Query: 1321 VEQAWRVSSDKHPLSMYEEELLGQAICA 1404
            VE  WRV S+KHPLS+ E+E++GQAICA
Sbjct: 1054 VEAMWRVPSNKHPLSLKEKEIIGQAICA 1081


>ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537692|gb|EEF39315.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 868

 Score =  429 bits (1104), Expect = e-118
 Identities = 248/458 (54%), Positives = 295/458 (64%), Gaps = 14/458 (3%)
 Frame = +1

Query: 73   ENGGKHVDVLGEPSSLSALKAAFESLAGKHPPNADSDVLDISDPPSTKGCSISPPFVAEE 252
            +NG   +DVLGE  SLS+L+AAFE+LAGK     +S+                 PFV EE
Sbjct: 187  KNGSNVLDVLGEEGSLSSLRAAFEALAGKPESETNSE-------------GKQTPFVPEE 233

Query: 253  -----------KPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEGERLVVVATNVAE 399
                         RG      G L VLPLYAMLPAAAQLR+FD+VKEGERLVVVATNVAE
Sbjct: 234  WVEQSNHSVGKNSRGGKGISIGALRVLPLYAMLPAAAQLRIFDEVKEGERLVVVATNVAE 293

Query: 400  TSLTIPGIKYVVDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLY 579
            TSLTIP IKYVVDTGREKVK YN +NGME Y++QWISK              PG+CYRLY
Sbjct: 294  TSLTIPAIKYVVDTGREKVKNYNPSNGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLY 353

Query: 580  SKAAFSNIFLEFSTAEISKIPVDGVVLLMKSMGIDKVANXXXXXXXXXXXXXXXXRCLKS 759
            S A F+NI  +FS AEISK+P++ +VL++KSM + KV N                 CLK 
Sbjct: 354  SSAVFNNILPDFSCAEISKVPLENIVLILKSMSV-KVENFPFPTPPEANALKEAEDCLKI 412

Query: 760  LEALDNFGRLSLLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYXXXXXXXL 939
            LEALD  GRL+ LGKAM+ +PM PRHSRMLLTVIQIL K + +A+ +L+ GY       L
Sbjct: 413  LEALDENGRLTALGKAMSYFPMGPRHSRMLLTVIQIL-KFRNFARPHLILGYAAAAAAAL 471

Query: 940  SLSNPFIMQSGGSGGDKNDLQQNENSGTSGTQKRLDQXXXXXXXXXXXXXXXXRAKFCNP 1119
            SLSNPF++Q  GS  D N L Q+  SGT   +K LD+                R KF N 
Sbjct: 472  SLSNPFLIQFEGSQDDNNVLDQDGGSGTLDNKKNLDKQEKLRKKKLKETLKVSREKFSNL 531

Query: 1120 SSDALSIAYALQLFELAESPVEFCNENALFFKTMEEMSKLRKQLLRLVFHQKSTH---QE 1290
            +SDAL+IAYALQ FEL+ SPVEFC+ENAL  KTMEEMSKLRKQ+L+LVF++   H   Q+
Sbjct: 532  TSDALTIAYALQCFELSNSPVEFCSENALHLKTMEEMSKLRKQILQLVFNKNVNHGFEQD 591

Query: 1291 FLWTHGPLEDVEQAWRVSSDKHPLSMYEEELLGQAICA 1404
            F W+HG + DVEQAWRV S K  L + EEELL QAICA
Sbjct: 592  FSWSHGNMGDVEQAWRVLSRK--LKLDEEELLCQAICA 627


>ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  425 bits (1092), Expect = e-116
 Identities = 239/440 (54%), Positives = 280/440 (63%), Gaps = 2/440 (0%)
 Frame = +1

Query: 91   VDVLGEPSSLSALKAAFESLAGKHPPNADSDVLDISDPPSTKGCSISPPFVAEEKPRGPS 270
            V VL E SSL+ALK AFE+LAG++     S+   +   P             E+K  G  
Sbjct: 533  VGVLREKSSLAALKCAFEALAGENASECKSEGKQVPSMPEEYPEQYKNSM--EKKTVGDK 590

Query: 271  VPCAGGLHVLPLYAMLPAAAQLRVFDKVKEGERLVVVATNVAETSLTIPGIKYVVDTGRE 450
                  L V+PLYAMLPA AQL VFD+VKEGERLVVVATNVAETSLTIPGIKYVVDTGRE
Sbjct: 591  GLFTSALRVMPLYAMLPAVAQLHVFDEVKEGERLVVVATNVAETSLTIPGIKYVVDTGRE 650

Query: 451  KVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLYSKAAFSNIFLEFSTAEI 630
            KVK YNS+NGME Y+VQWISK              PG+CYRLYS A ++NI  +FS AEI
Sbjct: 651  KVKNYNSSNGMEAYEVQWISKASADQRKGRAGRTGPGHCYRLYSSAVYNNILPDFSCAEI 710

Query: 631  SKIPVDGVVLLMKSMGIDKVANXXXXXXXXXXXXXXXXRCLKSLEALDNFGRLSLLGKAM 810
            SK+PVD +VL++KSM IDKV                  RCLK+LEALDN GRL+ LGKAM
Sbjct: 711  SKVPVDSIVLVLKSMHIDKVEKFPFPTPPEAAALVEAERCLKTLEALDNTGRLTSLGKAM 770

Query: 811  AQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYXXXXXXXLSLSNPFIMQSGGSGGDK 990
            A YPMSPRHSRMLLT IQI  K++     NLV GY       LS SN F+    GS  D 
Sbjct: 771  ACYPMSPRHSRMLLTAIQITRKMKDLDTANLVLGYAVATAAALSFSNAFLKHFEGSHTDS 830

Query: 991  NDLQQNENSGTSGTQKRLDQXXXXXXXXXXXXXXXXRAKFCNPSSDALSIAYALQLFELA 1170
            N  +Q+  S + G+ K LD+                RA+F N +SD L++AYAL  FEL+
Sbjct: 831  NGSEQDGRSSSLGSNKILDKQEKIKIKKLRETTKLSRARFSNSTSDTLTVAYALHCFELS 890

Query: 1171 ESPVEFCNENALFFKTMEEMSKLRKQLLRLVF--HQKSTHQEFLWTHGPLEDVEQAWRVS 1344
             SPVEFC+ENAL  KTMEEMSKLR+QLL+LVF  H     Q F WTHG +EDVEQAWRV 
Sbjct: 891  TSPVEFCHENALHLKTMEEMSKLRRQLLQLVFNHHVHELEQGFSWTHGTVEDVEQAWRVL 950

Query: 1345 SDKHPLSMYEEELLGQAICA 1404
            S K    +  E++LGQAICA
Sbjct: 951  SSKRSTLLNVEDILGQAICA 970