BLASTX nr result
ID: Coptis25_contig00004591
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004591
(2643 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu... 484 e-134
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247... 478 e-132
ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containin... 475 e-131
ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216... 475 e-131
gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays] 470 e-129
>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor,
small subunit, putative [Ricinus communis]
Length = 857
Score = 484 bits (1247), Expect = e-134
Identities = 286/657 (43%), Positives = 363/657 (55%), Gaps = 9/657 (1%)
Frame = -2
Query: 2258 GPAEIIWEGNEIIVKKNKVRVPKGSANTQTSIENADRPTSNPLPPQSEAYASYKNTSV-S 2082
GPAEIIW+GNEIIV+K K+ PK + Q S DRPTSNPLPPQSEA+A Y+ + S
Sbjct: 140 GPAEIIWQGNEIIVRKKKI--PKKKSADQQSRNEDDRPTSNPLPPQSEAFAEYQKAPMPS 197
Query: 2081 AEQVFESVSQETPNFGTEQDKAHCPFHIKTGACRFGVRCSRAHFYPDKSCTLLIKNMYTG 1902
AE++ E+V+Q+ PNFGTEQDKAHCPFH+KTGACRFG RCSR HFYPDK+ TLL+KNMY G
Sbjct: 198 AERMLENVAQQIPNFGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPDKANTLLMKNMYNG 257
Query: 1901 PGLTWEQDEGLESTDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHY 1722
PGL WEQDEGLE TDEE+ RSYEEFYEDVHTEFLK+GEI NFKVCKN SFHLRGNVYV Y
Sbjct: 258 PGLAWEQDEGLEHTDEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQY 317
Query: 1721 KSLESAIHAYRAINGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHC 1542
KSL+SA+ AY +INGRYFA KQ+ CEFV VTRW+VAICGEYMKSRL+ CSRGTACNFIHC
Sbjct: 318 KSLDSAVLAYCSINGRYFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIHC 377
Query: 1541 FQNPCGDYEWADWDNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRLNHE 1362
F+NP GDYEWADWD PPPRYW+EKM ALFG SDE DK M Q+ + PR S K
Sbjct: 378 FRNPGGDYEWADWDKPPPRYWIEKMTALFGYSDESACDKQMEQDKFKQPRMSSK------ 431
Query: 1361 XXXXXXXXXXXXXXXXXXXXXXXXXRNRYLLSTPSNREEGSAI--SRKMISSTDESKRYE 1188
+R+ S +R+ ++ S K + D+ +R
Sbjct: 432 --------------------RIPAYTDRHHSSRSRSRDIYYSLHYSGKSDNEDDDEERTH 471
Query: 1187 ENSKSEGVDRYKEISIFRDHGSGDYSFKDRDKYYSRSRAHHR------NEGRDHSDYHGN 1026
+ +S+ D K+I I H Y +D + S ++H ++G +D N
Sbjct: 472 RHWRSD--DDRKQIHI---HDEKSYR---KDYHLSNRKSHDMISDGGWSDGDSEADRERN 523
Query: 1025 VKKKHGSSDCEGKDQLHCHDSPRNYSDLGRKQKRTHSSRRVYVTGRIKAEDIHAEHKKSE 846
+ HG H +++S++ K SS + + A D ++
Sbjct: 524 KRHGHG----------HVTKRSKHHSEV-TKHSTHWSSGKSKDSNHKAASDEWSDGDSGA 572
Query: 845 ISESNSPHSHGGRCDSHDSIETIDPSDRWESGTTVPCETDNSRSYSSEYNEPCEKMHRPH 666
E N+ H H + H S E S RW SG + + N + S E+++ + H
Sbjct: 573 DRERNNCHGHVAKRSKHQS-EVTKHSTRWSSGKS---KDSNHQENSDEWSDGGRNGQKEH 628
Query: 665 LQSTGVCFREIXXXXXXXXXXSHSIKWSEERESPGEDLHSRQDREHYHEKRVSRRGHKKD 486
+ R + ++ +S E HSR R H+ +V D
Sbjct: 629 SSAEVSEHRMKGVSLDDNRNSTSKCSGADGYQSDREKHHSRMVRSSRHQSKVRSMDDLGD 688
Query: 485 NKPLNEGNSESFSSGDYRGESDIGHKEDPSLRNSGGHHMQKRLSSTDLQKDQRNRKR 315
K N + D + P + S H LS D +D R R R
Sbjct: 689 GKESNR-------------DEDRDRHDHPRKKRSRPHSRSSELS--DDYQDDRYRTR 730
>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 478 bits (1230), Expect = e-132
Identities = 277/666 (41%), Positives = 355/666 (53%), Gaps = 13/666 (1%)
Frame = -2
Query: 2258 GPAEIIWEGNEIIVKKNKVRVPKGSANTQTSIE---------NADRPTSNPLPPQSEAYA 2106
GPAEIIW+GNEIIVKK +VR+ K + + E + +RPTSNPLPPQSEA++
Sbjct: 115 GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEVLLRLFQLYDTERPTSNPLPPQSEAFS 174
Query: 2105 SYKNTSVSAEQVFESVSQETPNFGTEQDKAHCPFHIKTGACRFGVRCSRAHFYPDKSCTL 1926
+ + +S++Q+F VS++ PNFGTEQDK HCPFHIKTGACRFG RCSR HFYPDKSCTL
Sbjct: 175 DHNASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKTGACRFGQRCSRVHFYPDKSCTL 234
Query: 1925 LIKNMYTGPGLTWEQDEGLESTDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHL 1746
LIKNMY GPGL WEQDEGLE TDEE+ R YEEFYEDV TEFLKFGEI NFKVC+NGSFHL
Sbjct: 235 LIKNMYNGPGLAWEQDEGLEYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHL 294
Query: 1745 RGNVYVHYKSLESAIHAYRAINGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRG 1566
RGNVYVHYKSL+SA+ AY +ING Y+A KQ+TCEFVGVTRW+VAICGEYMKSR KTCS G
Sbjct: 295 RGNVYVHYKSLDSAVLAYHSINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHG 354
Query: 1565 TACNFIHCFQNPCGDYEWADWDNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDS 1386
TACNFIHCF+NP GDYEWADWD PPPRYWV+ MVALFG +DE G DK + QE R +
Sbjct: 355 TACNFIHCFRNPGGDYEWADWDKPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRST 414
Query: 1385 KKIRLNHEXXXXXXXXXXXXXXXXXXXXXXXXXRNRYLLSTPSNREEG---SAISRKMIS 1215
+RY +RE G +R+
Sbjct: 415 SN--------------------------AGTVDADRYHSRRSRSRESGYSHGEYARRQFD 448
Query: 1214 STDESKR-YEENSKSEGVDRYKEISIFRDHGSGDYSFKDRDKYYSRSRAHHRNEGRDHSD 1038
D K Y + S+G K I + + + F D YSRSR H N D
Sbjct: 449 ENDAHKNVYYQRHTSDG---RKRIKMHEERYEEEAHF--GDNRYSRSRIH--NVESDGDL 501
Query: 1037 YHGNVKKKHGSSDCEGKDQLHCHDSPRNYSDLGRKQKRTHSSRRVYVTGRIKAEDIHAEH 858
+ + +D K + D G ++ +T+ S + H
Sbjct: 502 LRDGTRDRERHNDHRRKSSRQREKVLESPDDYGERKNKTYDSEGDWSDREGDKSRKHGHT 561
Query: 857 KKSEISESNSPHSHGGRCDSHDSIETIDPSDRWESGTTVPCETDNSRSYSSEYNEPCEKM 678
+KS + + DS++SI D W +D + ++ +++
Sbjct: 562 RKSLKHQKEAMAVMDDLGDSNNSIHEPDSDGGW---------SDRDGDHDGHHDHTMKRL 612
Query: 677 HRPHLQSTGVCFREIXXXXXXXXXXSHSIKWSEERESPGEDLHSRQDREHYHEKRVSRRG 498
S F + S S R G+ HS + + H VS
Sbjct: 613 KNRSKMSE---FSNDHRNSKYRTDATDSDGDSSHRNRQGDRYHSHRRKSSRHWDEVSETA 669
Query: 497 HKKDNKPLNEGNSESFSSGDYRGESDIGHKEDPSLRNSGGHHMQKRLSSTDLQKDQRNRK 318
++K + ++ +GD+ E +G + RN H S D ++ ++N K
Sbjct: 670 DDDEDK--RKRTHDTDPTGDWSDE--VGERHQSKRRNCSRHW------SDDHEETEKNVK 719
Query: 317 RRKSGE 300
G+
Sbjct: 720 DEFQGQ 725
>ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like [Cucumis
sativus]
Length = 838
Score = 475 bits (1223), Expect = e-131
Identities = 254/534 (47%), Positives = 323/534 (60%), Gaps = 20/534 (3%)
Frame = -2
Query: 2258 GPAEIIWEGNEIIVKKNKVRVPKGSANTQTSIENADRPTSNPLPPQSEAYASYKNTSVSA 2079
GPAEIIW+G EII+KK ++VPK S + S E+A RPTSNPLPPQSEA+ YKNT +S
Sbjct: 139 GPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTSNPLPPQSEAFTDYKNTPIST 198
Query: 2078 EQVFESVSQETPNFGTEQDKAHCPFHIKTGACRFGVRCSRAHFYPDKSCTLLIKNMYTGP 1899
+QV E V+ + PNFGTEQDK+HCPFH+KTGACRFG RCSR HFYP+KSCTLLIKNMY GP
Sbjct: 199 KQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPEKSCTLLIKNMYNGP 258
Query: 1898 GLTWEQDEGLESTDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYK 1719
GL WEQDEGLE TDEE+ R YEEFY+DVHTEFLK+GEI NFKVCKNGSFHLRGN+YVHYK
Sbjct: 259 GLAWEQDEGLEFTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNGSFHLRGNLYVHYK 318
Query: 1718 SLESAIHAYRAINGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCF 1539
S++SA+ AY A NGR++A KQI CEF+ VTRW++AICGE+MK+R KTCS GTACNFIHCF
Sbjct: 319 SVDSAVLAYNANNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIHCF 378
Query: 1538 QNPCGDYEWADWDNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWS-FPRDSKKIRLNHE 1362
+NP GDYEWAD D PPRYW++KM +LFG DE ++ H EHW+ F + SK + ++ +
Sbjct: 379 RNPGGDYEWADSDKSPPRYWLKKMTSLFGYLDEYENETHSELEHWNKFGKSSKSMTIDVD 438
Query: 1361 XXXXXXXXXXXXXXXXXXXXXXXXXRNRYLLSTPSNREEGSAISRKMISSTDESKRYEEN 1182
N Y S RE+ + + E K+Y++
Sbjct: 439 ---SYRSRRSKSRSLDHGSRRSDNNENDYRWIRHSRREKVHEKQQSLDKEEYEKKKYDQQ 495
Query: 1181 SKS---------------EGVDRYKEISIFRDHGSGDYSFKDRDKYYSRSRAHHRNEGRD 1047
K+ E VD ++E S +D S + K S + RN RD
Sbjct: 496 KKTDLMIQILMNLWINSDESVDEFEERS--KDRDRSRRSSRRPRKQESNWKTDGRNVDRD 553
Query: 1046 HSDYHGNVKKKHGSSDCEGKDQLHCHDSPRNYSDLGRKQKRTHSSRRVYVTGR-IKAEDI 870
+ N + SS KD H H ++ S + T S VY + IK D
Sbjct: 554 DNKNVANETDEDWSSGDGDKDG-HQHKRRKSNS----RASETSRSTDVYPSNSVIKDRDT 608
Query: 869 HAEHKKSEISESNSPH---SHGGRCDSHDSIETIDPSDRWESGTTVPCETDNSR 717
H E+S + ++GG+ H T D D E + + + ++ +
Sbjct: 609 H------EVSSERNKERRLTYGGKPKKHWDEVTKDSDDHLEKKSKLKTDYESKK 656
>ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
Length = 867
Score = 475 bits (1222), Expect = e-131
Identities = 245/533 (45%), Positives = 327/533 (61%), Gaps = 11/533 (2%)
Frame = -2
Query: 2258 GPAEIIWEGNEIIVKKNKVRVPKGSANTQTSIENADRPTSNPLPPQSEAYASYKNTSVSA 2079
GPAEIIW+G EII+KK ++VPK S + S E+A RPTSNPLPPQSEA+ YKNT +S
Sbjct: 139 GPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTSNPLPPQSEAFTDYKNTPIST 198
Query: 2078 EQVFESVSQETPNFGTEQDKAHCPFHIKTGACRFGVRCSRAHFYPDKSCTLLIKNMYTGP 1899
+QV E V+ + PNFGTEQDK+HCPFH+KTGACRFG RCSR HFYP+KSCTLLIKNMY GP
Sbjct: 199 KQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPEKSCTLLIKNMYNGP 258
Query: 1898 GLTWEQDEGLESTDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYK 1719
GL WEQDEGLE TDEE+ R YEEFY+DVHTEFLK+GEI NFKVCKNGSFHLRGN+YVHYK
Sbjct: 259 GLAWEQDEGLEFTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNGSFHLRGNLYVHYK 318
Query: 1718 SLESAIHAYRAINGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCF 1539
S++SA+ AY A NGR++A KQI CEF+ VTRW++AICGE+MK+R KTCS GTACNFIHCF
Sbjct: 319 SVDSAVLAYNANNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIHCF 378
Query: 1538 QNPCGDYEWADWDNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWS-FPRDSKKIRLNHE 1362
+NP GDYEWAD D PPRYW++KM +LFG DE ++ H EHW+ F + SK + ++ +
Sbjct: 379 RNPGGDYEWADSDKSPPRYWLKKMTSLFGYLDEYENETHSELEHWNKFGKSSKSMTIDVD 438
Query: 1361 XXXXXXXXXXXXXXXXXXXXXXXXXRNRYLLSTPSNREEGSAISRKMISSTDESKRYEEN 1182
N Y S RE+ + + E K+Y++
Sbjct: 439 ---SYRSRRSKSRSLDHGSRRSDNNENDYRWIRHSRREKVHEKQQSLDKEEYEKKKYDQQ 495
Query: 1181 SKSEGVDRYKEISIFRDHGSGDYSFKDRDKYYSRSRAHHRNEGRDHSDYHGNVKKKHGSS 1002
K+ D + S+ DK+ RS+ RN R+ Y + +K+ S+
Sbjct: 496 KKNRSNDTDSDESV--------------DKFGERSK--DRNRSREKEKY--DRWRKNRSN 537
Query: 1001 DCEGKDQLHCHDSPRNYSDLGRKQKRTHSSRRVYVTGRIKAEDIHAEHKKSEISESNSP- 825
D + + + + D R ++ + R+ + ++ + K+ +E++
Sbjct: 538 DTDSDESV--DEFEERSKDRDRSRRSSRRPRKQESNWKTDGRNVDRDDNKNAANETDEDW 595
Query: 824 ---------HSHGGRCDSHDSIETIDPSDRWESGTTVPCETDNSRSYSSEYNE 693
H H R + + ET +D + S + + + ++ SSE N+
Sbjct: 596 SSGDGDKDGHQHKRRKSNSRASETSRSTDVYPSNSVI--KDRDTHEVSSERNK 646
>gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 470 bits (1209), Expect = e-129
Identities = 244/441 (55%), Positives = 303/441 (68%), Gaps = 12/441 (2%)
Frame = -2
Query: 2258 GPAEIIWEGNEIIVKKNKVRVPKGSANTQTSIENADRPTSNPLPPQSEAYASYKNT-SVS 2082
GPAEIIW+GNEIIVKK KV+VPKGS + I+ DRPTSNPLPPQS A A+++ S+S
Sbjct: 179 GPAEIIWKGNEIIVKKKKVKVPKGSKE-KLQIQEEDRPTSNPLPPQSVALAAHRREPSLS 237
Query: 2081 AEQVFESVSQETPNFGTEQDKAHCPFHIKTGACRFGVRCSRAHFYPDKSCTLLIKNMYTG 1902
A++V + V+QETPNFGTEQDKAHCPFH+KTGACRFG+RCSR HFYPDKS TLL+KNMY G
Sbjct: 238 AQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNG 297
Query: 1901 PGLTWEQDEGLESTDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHY 1722
PGL EQDEGLE TDEEI +SYEEFYEDVHTEFLKFGE+ NFKVC+NGSFHLRGNVYVHY
Sbjct: 298 PGLALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHY 357
Query: 1721 KSLESAIHAYRAINGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHC 1542
KSL+SA+ AY ++NGRYFA KQITCEFV VTRW+ AICGEYM+SR KTCS G ACNFIHC
Sbjct: 358 KSLDSALLAYSSMNGRYFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIHC 417
Query: 1541 FQNPCGDYEWADWDNPPPRYWVEKMVALFGPSDEVGSDK--HMGQEHWSFPRDSKKIRLN 1368
F+NP GDYEWADWDN PPRYW+ KMVALFGPS + ++K H S D KK++++
Sbjct: 418 FRNPGGDYEWADWDNHPPRYWIRKMVALFGPSVDEMNEKASHTPDFRSSVGSDRKKLKIS 477
Query: 1367 HEXXXXXXXXXXXXXXXXXXXXXXXXXRNRYLLSTPSNRE-------EGSAISRKMISST 1209
NRY+ N + + + S++ SS
Sbjct: 478 ---------------------------SNRYVSRGSRNEDVHTRHSPQDYSHSKQERSSH 510
Query: 1208 DESKRYEENSK-SEGVDRYKEISIFRDHGSGDYSFKDRDKYYSRSRAH-HRNEGRDHSDY 1035
+ + Y + + S D+++ + GD + + + S++H H++E R SD
Sbjct: 511 NMNYEYRRHKRDSSAADKHRRQDV------GDTNDRQFSTMGNDSKSHRHKHEERHRSD- 563
Query: 1034 HGNVKKKHGSSDCEGKDQLHC 972
HGN +K+ D + + + HC
Sbjct: 564 HGNGEKE---DDSKTRPRKHC 581