BLASTX nr result

ID: Coptis25_contig00004581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004581
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277818.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   255   1e-65
ref|XP_002311384.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|NP_001239686.1| uncharacterized protein LOC100803596 [Glycin...   234   2e-59
gb|AFK46377.1| unknown [Lotus japonicus]                              234   3e-59
ref|XP_002316040.1| predicted protein [Populus trichocarpa] gi|2...   232   1e-58

>ref|XP_002277818.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-3,
           mitochondrial [Vitis vinifera]
           gi|296083251|emb|CBI22887.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  255 bits (651), Expect = 1e-65
 Identities = 136/233 (58%), Positives = 161/233 (69%)
 Frame = -1

Query: 875 MARIKPQMLLLQSKRKKGPTRISVTTXXXXXXXXXXXXXXXVTTYRLRSLRSMDLAENGL 696
           MARIKPQ LLLQSK+KKGPTRIS+TT                 TYR  S RS +  ++G+
Sbjct: 1   MARIKPQALLLQSKKKKGPTRISITTIIFCNLVVVLVVFSLFATYRHWSNRSRNQFQSGV 60

Query: 695 PDHEGVDGFADAGKFDRHSYAILDTSKGSVIVELLKDSSPEIVDKFVDFCHKGHFHGMLF 516
            + E  DGF D+ +FD   YAIL+TSKG + VEL KD SPEIVDKF+D C KG+F GM F
Sbjct: 61  SNVEENDGFVDSKRFDLPGYAILNTSKGYITVELYKDGSPEIVDKFLDLCQKGYFKGMPF 120

Query: 515 DRVIRNYVIQAGDLQSLGKAEDWTSGVKYQSQLTISPKREAFVLGTPKAIHGEKGFELFI 336
             VI+NYVIQ G  Q +G AEDWTS  K    L +SPK EAF+LGT K     K FELFI
Sbjct: 121 HHVIKNYVIQGGHSQGIGAAEDWTSKGKPHGHLPLSPKHEAFMLGTSKTKQDRKKFELFI 180

Query: 335 TRARIPDFDDKLVVFGKVIEGEDVVQEIEDVDTDKQYRPKFPIRIIMVTLTQD 177
           T A IPD +DKL+VFG+VI+GEDVVQEIE+VDTD+ YRPK  I II VTL ++
Sbjct: 181 TTAPIPDLNDKLIVFGRVIKGEDVVQEIEEVDTDEHYRPKSRIGIINVTLKRE 233


>ref|XP_002311384.1| predicted protein [Populus trichocarpa] gi|222851204|gb|EEE88751.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  238 bits (608), Expect = 1e-60
 Identities = 131/234 (55%), Positives = 158/234 (67%), Gaps = 1/234 (0%)
 Frame = -1

Query: 875 MARIKPQMLLLQSKRKKGPTRISVTTXXXXXXXXXXXXXXXVTTYRLRSLRSMDLAENGL 696
           MARIKPQ LL QSK+KKGP RIS TT               V TYR  S RS +   +GL
Sbjct: 1   MARIKPQALLNQSKKKKGPARISATTIFLCNLVVLVIILSLVATYRHWSQRSKNQPGSGL 60

Query: 695 PDHEGV-DGFADAGKFDRHSYAILDTSKGSVIVELLKDSSPEIVDKFVDFCHKGHFHGML 519
              E   D FAD+ K+D   YAIL+TSKG + VEL KD SP IVDKF+D C KG+F G+ 
Sbjct: 61  STFEDTADSFADSKKYDLPGYAILNTSKGYITVELYKDGSPMIVDKFLDLCQKGYFKGIP 120

Query: 518 FDRVIRNYVIQAGDLQSLGKAEDWTSGVKYQSQLTISPKREAFVLGTPKAIHGEKGFELF 339
           F  VI++YVIQAG  Q LG AEDWT+  K  S+L  SPK EAF++GT K      GFELF
Sbjct: 121 FHHVIKHYVIQAGHSQGLGAAEDWTTKGKLHSRLATSPKHEAFMIGTSKT-RDSTGFELF 179

Query: 338 ITRARIPDFDDKLVVFGKVIEGEDVVQEIEDVDTDKQYRPKFPIRIIMVTLTQD 177
           IT A IPD +DK++VFG+ ++GEDVVQEIE+VDTD+ YRPK P+ II VTL ++
Sbjct: 180 ITTAPIPDLNDKILVFGRAVKGEDVVQEIEEVDTDEHYRPKSPVGIIGVTLKRE 233


>ref|NP_001239686.1| uncharacterized protein LOC100803596 [Glycine max]
           gi|255634745|gb|ACU17734.1| unknown [Glycine max]
          Length = 232

 Score =  234 bits (597), Expect = 2e-59
 Identities = 124/232 (53%), Positives = 158/232 (68%)
 Frame = -1

Query: 875 MARIKPQMLLLQSKRKKGPTRISVTTXXXXXXXXXXXXXXXVTTYRLRSLRSMDLAENGL 696
           MARIKPQ LL QSKRKKGP+RIS  T                 +YR  S RS   +E+ L
Sbjct: 1   MARIKPQALLQQSKRKKGPSRISAATVIFYFLILALLGFFLFASYRHWSSRSRLQSEDHL 60

Query: 695 PDHEGVDGFADAGKFDRHSYAILDTSKGSVIVELLKDSSPEIVDKFVDFCHKGHFHGMLF 516
              EG + F D+ K +   YA+L+TSKGS+I+EL K+S+PE+VD+F+D C KGHF GMLF
Sbjct: 61  SVSEGENTFVDSKKSELPGYAVLNTSKGSIIIELYKESAPEVVDEFIDLCQKGHFKGMLF 120

Query: 515 DRVIRNYVIQAGDLQSLGKAEDWTSGVKYQSQLTISPKREAFVLGTPKAIHGEKGFELFI 336
            +VI++YVIQAGD Q  G  EDW   ++ +     S K EAF+LGT K  H  KGF+LFI
Sbjct: 121 HKVIKHYVIQAGDNQGQGATEDW--NLRGKQHTITSMKHEAFMLGTSKGKHHNKGFDLFI 178

Query: 335 TRARIPDFDDKLVVFGKVIEGEDVVQEIEDVDTDKQYRPKFPIRIIMVTLTQ 180
           T A IPD ++K++VFG+VI+GEDVVQEIE+VDTD+ Y+PK  I I+ VTL Q
Sbjct: 179 TTAPIPDLNEKIIVFGQVIKGEDVVQEIEEVDTDEHYKPKVSIGILDVTLKQ 230


>gb|AFK46377.1| unknown [Lotus japonicus]
          Length = 229

 Score =  234 bits (596), Expect = 3e-59
 Identities = 128/232 (55%), Positives = 157/232 (67%)
 Frame = -1

Query: 875 MARIKPQMLLLQSKRKKGPTRISVTTXXXXXXXXXXXXXXXVTTYRLRSLRSMDLAENGL 696
           MARIKPQ LL QSKRKKGP RIS  T                 +YR  S RS   ++N L
Sbjct: 1   MARIKPQALLQQSKRKKGPARISPMTMMFYGLILVLVVFFLYASYRHWSNRSRFNSDNHL 60

Query: 695 PDHEGVDGFADAGKFDRHSYAILDTSKGSVIVELLKDSSPEIVDKFVDFCHKGHFHGMLF 516
              EG D F DA K D   YA+++TSKGS+++EL K+S+PE+VD+F+D C KGHF GMLF
Sbjct: 61  SVSEG-DAFLDARKSDLPGYAVVNTSKGSIVIELHKESAPEVVDEFIDLCQKGHFKGMLF 119

Query: 515 DRVIRNYVIQAGDLQSLGKAEDWTSGVKYQSQLTISPKREAFVLGTPKAIHGEKGFELFI 336
           +RVI++YVIQAGD Q  G  EDW+     + + + S K EAF+LGT K  H  KGF LFI
Sbjct: 120 NRVIKHYVIQAGDGQGTGTTEDWS----LRGKQSTSMKHEAFMLGTSKGKHTNKGFNLFI 175

Query: 335 TRARIPDFDDKLVVFGKVIEGEDVVQEIEDVDTDKQYRPKFPIRIIMVTLTQ 180
           T A IPD ++KLVVFG+VI+GEDVVQEIE+VDTD+ Y PK  I I+ VTL Q
Sbjct: 176 TTAPIPDLNEKLVVFGQVIKGEDVVQEIEEVDTDEHYNPKISIGILDVTLRQ 227


>ref|XP_002316040.1| predicted protein [Populus trichocarpa] gi|222865080|gb|EEF02211.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  232 bits (591), Expect = 1e-58
 Identities = 131/234 (55%), Positives = 156/234 (66%), Gaps = 1/234 (0%)
 Frame = -1

Query: 875 MARIKPQMLLLQSKRKKGPTRISVTTXXXXXXXXXXXXXXXVTTYRLRSLRSMDLAENGL 696
           MARIKPQ LL QSKRKKGP RIS TT               V TY+  S RS +   +GL
Sbjct: 1   MARIKPQALLNQSKRKKGPARISATTIFLCNLVVVVIVLSVVATYKHWSQRSRNQPISGL 60

Query: 695 PDHEGV-DGFADAGKFDRHSYAILDTSKGSVIVELLKDSSPEIVDKFVDFCHKGHFHGML 519
              E   + FAD+ K+D   YAIL+TSKG + VEL KD SP IVDKF+D C K +F GM 
Sbjct: 61  STFEDTANSFADSKKYDLPGYAILNTSKGYITVELYKDGSPMIVDKFLDLCQKEYFKGMP 120

Query: 518 FDRVIRNYVIQAGDLQSLGKAEDWTSGVKYQSQLTISPKREAFVLGTPKAIHGEKGFELF 339
           F  VI++YVIQAG  Q LG AEDWT+  K  S+L  SPK EAF++GT K       FELF
Sbjct: 121 FHHVIKHYVIQAGHGQGLGAAEDWTTKGKLHSRLATSPKHEAFMIGTSKT-RDNTEFELF 179

Query: 338 ITRARIPDFDDKLVVFGKVIEGEDVVQEIEDVDTDKQYRPKFPIRIIMVTLTQD 177
           IT A IPD +DKL+VFG+ I+GEDVVQEIE+VDTD+ YRPK P+ II VTL ++
Sbjct: 180 ITTAPIPDLNDKLLVFGRAIKGEDVVQEIEEVDTDEHYRPKSPVGIIGVTLKRE 233


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