BLASTX nr result

ID: Coptis25_contig00004509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004509
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261...   416   e-114
ref|XP_002517183.1| conserved hypothetical protein [Ricinus comm...   404   e-110
ref|XP_002311838.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_003541625.1| PREDICTED: uncharacterized protein LOC100806...   395   e-107
ref|XP_003528674.1| PREDICTED: uncharacterized protein LOC100785...   394   e-107

>ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261302 [Vitis vinifera]
            gi|297736996|emb|CBI26197.3| unnamed protein product
            [Vitis vinifera]
          Length = 446

 Score =  416 bits (1068), Expect = e-114
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 5/277 (1%)
 Frame = +3

Query: 288  MSYFEVLKKFKRF---EPAS--LAFFVITVFGFLCCFFYLDYRVVVSKGFQYNGKGQQRF 452
            + +F+V KKFKRF   EP+   L FF +TV   +CCFFYLDYR   +KGF ++ + + RF
Sbjct: 13   LPFFDVFKKFKRFRLLEPSVGVLGFFFVTV-SVICCFFYLDYRAA-AKGFLFSSQSE-RF 69

Query: 453  LWLGFEDGDEVQKSSRVGFLGKGGEKCDLFSGNWVWDENYPLYESKDCQFLDSGFRCSEN 632
            +W  F    E     RV FL + G+ CD+F+G WVWDE YPLY+SKDC F+D GFRCSEN
Sbjct: 70   MWFRFGGSSE---DRRVDFLAEQGDGCDVFNGGWVWDEAYPLYQSKDCSFMDDGFRCSEN 126

Query: 633  GRPDNFYTKWRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQWESLLCMLSSVIP 812
            GRPD FYTKWRWQPKDCNLPRF+A  MLE+LRN+RL FVGDSIGRNQWESLLCMLSS IP
Sbjct: 127  GRPDMFYTKWRWQPKDCNLPRFNATLMLERLRNKRLAFVGDSIGRNQWESLLCMLSSAIP 186

Query: 813  NKDSIYEVNGSPITKHKGFLIFKFKDFNCTVEYYRAPFLVLQSRXXXXXXXXXKTTLKLD 992
            NK SIYEVNGSPITKHKGFL+FKFKDFNCTVEYYRAPFLVLQSR         +TTLKLD
Sbjct: 187  NKTSIYEVNGSPITKHKGFLVFKFKDFNCTVEYYRAPFLVLQSRPPAGASKMIRTTLKLD 246

Query: 993  KMDWSSVQWRDADILVFNTGHWWNYEKTIRGGCYFQE 1103
            +MDWSS++WRDAD+LVFNTGHWWNYEKTIRGGCYFQE
Sbjct: 247  QMDWSSMKWRDADVLVFNTGHWWNYEKTIRGGCYFQE 283


>ref|XP_002517183.1| conserved hypothetical protein [Ricinus communis]
            gi|223543818|gb|EEF45346.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 453

 Score =  404 bits (1038), Expect = e-110
 Identities = 186/277 (67%), Positives = 222/277 (80%), Gaps = 5/277 (1%)
 Frame = +3

Query: 288  MSYFEVLKKFKR---FEPAS--LAFFVITVFGFLCCFFYLDYRVVVSKGFQYNGKGQQRF 452
            M  FE+ KKFKR   FEP+   L FF++TV   +CCFFY D+R  ++KG++  GK + R+
Sbjct: 13   MQVFEIFKKFKRLRLFEPSVGVLGFFLVTVC-VICCFFYFDFRDAITKGYKVPGKSE-RY 70

Query: 453  LWLGFEDGDEVQKSSRVGFLGKGGEKCDLFSGNWVWDENYPLYESKDCQFLDSGFRCSEN 632
            +WL F +   ++   RV FLG+ G+ CD+F G WVWD+NYPLY+SKDC FLD GFRC+EN
Sbjct: 71   MWLQFNESSPIR---RVEFLGQEGDGCDVFDGEWVWDDNYPLYQSKDCSFLDEGFRCTEN 127

Query: 633  GRPDNFYTKWRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQWESLLCMLSSVIP 812
            GRPD FYTKWRWQPK CNLPRFDAK MLEKLRN+RLVF GDSIGRNQWESLLCMLSS +P
Sbjct: 128  GRPDLFYTKWRWQPKFCNLPRFDAKLMLEKLRNKRLVFAGDSIGRNQWESLLCMLSSAVP 187

Query: 813  NKDSIYEVNGSPITKHKGFLIFKFKDFNCTVEYYRAPFLVLQSRXXXXXXXXXKTTLKLD 992
            NKDSIYEVNGSPITKHKGFL+FKF+D+NCT+EYYR+PFLV+Q R         + TLKLD
Sbjct: 188  NKDSIYEVNGSPITKHKGFLVFKFRDYNCTIEYYRSPFLVVQGRPPAGVPKNIRLTLKLD 247

Query: 993  KMDWSSVQWRDADILVFNTGHWWNYEKTIRGGCYFQE 1103
            +MDW+S +WRDAD+LV N GHW+NYEKTIRGG YFQE
Sbjct: 248  QMDWNSGKWRDADLLVLNMGHWYNYEKTIRGGTYFQE 284


>ref|XP_002311838.1| predicted protein [Populus trichocarpa] gi|222851658|gb|EEE89205.1|
            predicted protein [Populus trichocarpa]
          Length = 339

 Score =  399 bits (1026), Expect = e-109
 Identities = 194/279 (69%), Positives = 215/279 (77%), Gaps = 7/279 (2%)
 Frame = +3

Query: 288  MSYFEVLKKFKRF-----EPAS--LAFFVITVFGFLCCFFYLDYRVVVSKGFQYNGKGQQ 446
            M  FE+ KKFKRF     EP+   L FF +TV   +  FFYLDYR V+ K F   GK + 
Sbjct: 13   MQLFEIFKKFKRFQLRFFEPSLGVLGFFFVTVC-VIFSFFYLDYRAVIVKEFIVPGKSE- 70

Query: 447  RFLWLGFEDGDEVQKSSRVGFLGKGGEKCDLFSGNWVWDENYPLYESKDCQFLDSGFRCS 626
            RF+WL         K+ RV FL + G  CDLF G+WVWDE YPLY+SKDC FLD GFRC+
Sbjct: 71   RFMWLQLNGSG---KNKRVEFLEEEGNGCDLFDGDWVWDEKYPLYQSKDCSFLDQGFRCT 127

Query: 627  ENGRPDNFYTKWRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQWESLLCMLSSV 806
            ENGRPD FYTKWRWQPK CNLPRFDAK MLEKLRN+RLVF GDSIGRNQWESLLCMLSS 
Sbjct: 128  ENGRPDLFYTKWRWQPKHCNLPRFDAKMMLEKLRNKRLVFAGDSIGRNQWESLLCMLSSA 187

Query: 807  IPNKDSIYEVNGSPITKHKGFLIFKFKDFNCTVEYYRAPFLVLQSRXXXXXXXXXKTTLK 986
            IPN+DSIYEVNGSPITKHKGFLIFKFKD+NCTVEYYR+PFLVLQSR         + TLK
Sbjct: 188  IPNEDSIYEVNGSPITKHKGFLIFKFKDYNCTVEYYRSPFLVLQSRPPAGSPQKVRLTLK 247

Query: 987  LDKMDWSSVQWRDADILVFNTGHWWNYEKTIRGGCYFQE 1103
            LD+MDW+SV+WR AD+LV N GHWWNYEKTIRGG YFQE
Sbjct: 248  LDRMDWNSVKWRSADVLVLNMGHWWNYEKTIRGGSYFQE 286


>ref|XP_003541625.1| PREDICTED: uncharacterized protein LOC100806510 [Glycine max]
          Length = 439

 Score =  395 bits (1014), Expect = e-107
 Identities = 186/268 (69%), Positives = 213/268 (79%), Gaps = 2/268 (0%)
 Frame = +3

Query: 306  LKKFKRFEPASLAFFVITVFGF-LCCFFYLDYRVVVSKGFQYNGKGQQRFLWLGFEDGDE 482
            +K+ + FEP+     V  V  F +C FFYLDYR +  K F ++G+  +RF W   + G  
Sbjct: 10   VKRLRLFEPSVGVGVVFLVSTFVICSFFYLDYRELAEK-FGFSGQPPERFTWSQEKRGSV 68

Query: 483  VQKSSRVGFLG-KGGEKCDLFSGNWVWDENYPLYESKDCQFLDSGFRCSENGRPDNFYTK 659
             ++  RV FLG KGG +CDLF GNWVWDE+YPLY+SKDC FLD GFRCSENGRPD FYTK
Sbjct: 69   EKRVHRVEFLGEKGGGECDLFEGNWVWDESYPLYQSKDCSFLDGGFRCSENGRPDLFYTK 128

Query: 660  WRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQWESLLCMLSSVIPNKDSIYEVN 839
            WRWQPK CNLPRF+A  MLE LRN+RLVF GDSIGRNQWESLLCMLSS +PNK+SIYEVN
Sbjct: 129  WRWQPKACNLPRFNATKMLENLRNKRLVFAGDSIGRNQWESLLCMLSSGVPNKESIYEVN 188

Query: 840  GSPITKHKGFLIFKFKDFNCTVEYYRAPFLVLQSRXXXXXXXXXKTTLKLDKMDWSSVQW 1019
            GSPITKHKGFL+F+FK +NCTVEYYRAPFLVLQSR         +TTLKLD+MDW S++W
Sbjct: 189  GSPITKHKGFLVFRFKHYNCTVEYYRAPFLVLQSRPPPRTDRKIRTTLKLDEMDWYSMKW 248

Query: 1020 RDADILVFNTGHWWNYEKTIRGGCYFQE 1103
            RDADILV NTGHWWNYEKTIRGGCYFQE
Sbjct: 249  RDADILVLNTGHWWNYEKTIRGGCYFQE 276


>ref|XP_003528674.1| PREDICTED: uncharacterized protein LOC100785144 [Glycine max]
          Length = 451

 Score =  394 bits (1012), Expect = e-107
 Identities = 193/287 (67%), Positives = 219/287 (76%), Gaps = 6/287 (2%)
 Frame = +3

Query: 261  SCEEYPLSNMSYFEVLKKFKR---FEPAS--LAFFVITVFGFLCCFFYLDYRVVVSK-GF 422
            S  ++   +MS FE ++K KR   FEP+   L F V+TVF  +CCFFY D   + S+ GF
Sbjct: 7    SSSQHEAESMSVFEAIRKAKRLRLFEPSLGVLGFVVVTVF-VICCFFYSDNGYLASRVGF 65

Query: 423  QYNGKGQQRFLWLGFEDGDEVQKSSRVGFLGKGGEKCDLFSGNWVWDENYPLYESKDCQF 602
                +  QRF WL  E         RV FLG+ G  CDLF G W+WDE+YPLY+SKDC+F
Sbjct: 66   F---EQPQRFAWLRIEGSTA---PPRVEFLGEKGGGCDLFDGEWIWDESYPLYQSKDCRF 119

Query: 603  LDSGFRCSENGRPDNFYTKWRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQWES 782
            LD GFRCSENGR D FYTKWRWQPK CNLPRF+A  MLEKLRN+R+VF GDSIGRNQWES
Sbjct: 120  LDEGFRCSENGRRDLFYTKWRWQPKGCNLPRFNATLMLEKLRNKRIVFAGDSIGRNQWES 179

Query: 783  LLCMLSSVIPNKDSIYEVNGSPITKHKGFLIFKFKDFNCTVEYYRAPFLVLQSRXXXXXX 962
            LLCMLSS +PNK+SIYEVNGSPITKHKGFL+FKFKDFNCTVEYYRAPFLVLQSR      
Sbjct: 180  LLCMLSSGVPNKESIYEVNGSPITKHKGFLVFKFKDFNCTVEYYRAPFLVLQSRPPTGAP 239

Query: 963  XXXKTTLKLDKMDWSSVQWRDADILVFNTGHWWNYEKTIRGGCYFQE 1103
               +TTLK+D MDW+S +WRDADILV NTGHWWNYEKTIRGGCYFQE
Sbjct: 240  ENIRTTLKVDTMDWNSKKWRDADILVLNTGHWWNYEKTIRGGCYFQE 286


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