BLASTX nr result
ID: Coptis25_contig00004468
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004468
(507 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABB29957.1| unknown [Solanum tuberosum] 152 7e-64
ref|XP_002276785.1| PREDICTED: 60S ribosomal protein L9 [Vitis v... 151 7e-64
gb|ABQ41922.1| 60S ribosomal protein large subunit 9 [Sonneratia... 156 1e-63
ref|XP_002891031.1| 60S ribosomal protein L9 [Arabidopsis lyrata... 153 2e-63
gb|ADN33776.1| 60S ribosomal protein l9 [Cucumis melo subsp. melo] 153 3e-63
>gb|ABB29957.1| unknown [Solanum tuberosum]
Length = 194
Score = 152 bits (385), Expect(2) = 7e-64
Identities = 73/88 (82%), Positives = 81/88 (92%)
Frame = +2
Query: 2 AKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKVDSWFGSRKTSASIRTALSHVG 181
AK I VEGP+GKLVRNFKHLNLDFQLIK+ E G+++LKVD+WFGSRK +ASIRTALSHV
Sbjct: 22 AKQIEVEGPRGKLVRNFKHLNLDFQLIKDEETGQKKLKVDAWFGSRKATASIRTALSHVN 81
Query: 182 NLINGVTKGYRYKMRFVYAHFPINASIS 265
NLI GVTKGYRYKMRFVYAHFPINASI+
Sbjct: 82 NLIVGVTKGYRYKMRFVYAHFPINASIT 109
Score = 116 bits (291), Expect(2) = 7e-64
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = +3
Query: 315 GDAKGIEIRNFLGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCH 494
G K IEIRNFLGEK+VRKVDMLDGVT++RSEKVKDEL+LDGNDIELVSRSAALINQKCH
Sbjct: 110 GGNKAIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCH 169
Query: 495 VKNK 506
VKNK
Sbjct: 170 VKNK 173
>ref|XP_002276785.1| PREDICTED: 60S ribosomal protein L9 [Vitis vinifera]
Length = 193
Score = 151 bits (382), Expect(2) = 7e-64
Identities = 74/88 (84%), Positives = 83/88 (94%)
Frame = +2
Query: 2 AKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKVDSWFGSRKTSASIRTALSHVG 181
AKMI VEGP+GKL RNFKHLNLDFQLIK+ E+GKR+LK+D+WFGSRKT+A+IRTALSHV
Sbjct: 22 AKMIEVEGPRGKLSRNFKHLNLDFQLIKD-ESGKRKLKIDAWFGSRKTTAAIRTALSHVE 80
Query: 182 NLINGVTKGYRYKMRFVYAHFPINASIS 265
NLI GVTKGYRYKMRFVYAHFPINASI+
Sbjct: 81 NLITGVTKGYRYKMRFVYAHFPINASIT 108
Score = 117 bits (294), Expect(2) = 7e-64
Identities = 58/61 (95%), Positives = 61/61 (100%)
Frame = +3
Query: 324 KGIEIRNFLGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCHVKN 503
KGIEIRNFLGEK+VRKVDMLDGV+ILRSEKVKDEL+LDGNDIELVSRSAALINQKCHVKN
Sbjct: 112 KGIEIRNFLGEKKVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKN 171
Query: 504 K 506
K
Sbjct: 172 K 172
>gb|ABQ41922.1| 60S ribosomal protein large subunit 9 [Sonneratia ovata]
gi|156633792|gb|ABU90895.1| ribosomal protein L9
[Sonneratia alba] gi|156633794|gb|ABU90896.1| ribosomal
protein L9 [Sonneratia alba] gi|156633796|gb|ABU90897.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633798|gb|ABU90898.1| ribosomal protein L9
[Sonneratia alba] gi|156633800|gb|ABU90899.1| ribosomal
protein L9 [Sonneratia alba] gi|156633802|gb|ABU90900.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633804|gb|ABU90901.1| ribosomal protein L9
[Sonneratia alba] gi|156633806|gb|ABU90902.1| ribosomal
protein L9 [Sonneratia alba] gi|156633808|gb|ABU90903.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633810|gb|ABU90904.1| ribosomal protein L9
[Sonneratia alba] gi|156633812|gb|ABU90905.1| ribosomal
protein L9 [Sonneratia alba] gi|156633814|gb|ABU90906.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633816|gb|ABU90907.1| ribosomal protein L9
[Sonneratia alba] gi|156633818|gb|ABU90908.1| ribosomal
protein L9 [Sonneratia alba] gi|156633820|gb|ABU90909.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633828|gb|ABU90913.1| ribosomal protein L9
[Sonneratia alba] gi|156633830|gb|ABU90914.1| ribosomal
protein L9 [Sonneratia alba] gi|156633832|gb|ABU90915.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633834|gb|ABU90916.1| ribosomal protein L9
[Sonneratia alba] gi|156633836|gb|ABU90917.1| ribosomal
protein L9 [Sonneratia alba] gi|156633838|gb|ABU90918.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633840|gb|ABU90919.1| ribosomal protein L9
[Sonneratia alba] gi|156633842|gb|ABU90920.1| ribosomal
protein L9 [Sonneratia alba] gi|156633844|gb|ABU90921.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633846|gb|ABU90922.1| ribosomal protein L9
[Sonneratia alba] gi|156633848|gb|ABU90923.1| ribosomal
protein L9 [Sonneratia alba] gi|156633850|gb|ABU90924.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633852|gb|ABU90925.1| ribosomal protein L9
[Sonneratia alba] gi|156633854|gb|ABU90926.1| ribosomal
protein L9 [Sonneratia alba] gi|156633856|gb|ABU90927.1|
ribosomal protein L9 [Sonneratia alba]
gi|156633858|gb|ABU90928.1| ribosomal protein L9
[Sonneratia alba] gi|156633860|gb|ABU90929.1| ribosomal
protein L9 [Sonneratia alba] gi|156634738|gb|ABU91368.1|
ribosomal protein L9 [Sonneratia ovata]
gi|156634740|gb|ABU91369.1| ribosomal protein L9
[Sonneratia ovata] gi|156634742|gb|ABU91370.1| ribosomal
protein L9 [Sonneratia ovata]
gi|156634744|gb|ABU91371.1| ribosomal protein L9
[Sonneratia ovata] gi|156634746|gb|ABU91372.1| ribosomal
protein L9 [Sonneratia ovata]
gi|156634748|gb|ABU91373.1| ribosomal protein L9
[Sonneratia ovata] gi|156634750|gb|ABU91374.1| ribosomal
protein L9 [Sonneratia ovata]
gi|156634752|gb|ABU91375.1| ribosomal protein L9
[Sonneratia ovata] gi|156634754|gb|ABU91376.1| ribosomal
protein L9 [Sonneratia ovata]
gi|156634756|gb|ABU91377.1| ribosomal protein L9
[Sonneratia ovata] gi|223469168|gb|ACM90068.1| ribosomal
protein L9 [Sonneratia ovata]
gi|223469170|gb|ACM90069.1| ribosomal protein L9
[Sonneratia ovata] gi|223469172|gb|ACM90070.1| ribosomal
protein L9 [Sonneratia ovata]
gi|223469174|gb|ACM90071.1| ribosomal protein L9
[Sonneratia ovata]
Length = 185
Score = 156 bits (395), Expect(2) = 1e-63
Identities = 73/88 (82%), Positives = 83/88 (94%)
Frame = +2
Query: 2 AKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKVDSWFGSRKTSASIRTALSHVG 181
AK+I VEGP+GKL RNFKHLNLDFQLIK+ + GKR+LK+++WFGSRKTSA+IRTALSHVG
Sbjct: 19 AKVIEVEGPRGKLTRNFKHLNLDFQLIKDEDTGKRKLKIEAWFGSRKTSAAIRTALSHVG 78
Query: 182 NLINGVTKGYRYKMRFVYAHFPINASIS 265
NLI GVTKGYRYKMRFVYAHFPINASI+
Sbjct: 79 NLITGVTKGYRYKMRFVYAHFPINASIT 106
Score = 111 bits (278), Expect(2) = 1e-63
Identities = 54/62 (87%), Positives = 60/62 (96%)
Frame = +3
Query: 321 AKGIEIRNFLGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCHVK 500
+K IEIRNFLGEKRVRKVDML+GV+++RSEKVKDELI+DGNDIELVSRS ALINQKCHVK
Sbjct: 109 SKSIEIRNFLGEKRVRKVDMLEGVSVVRSEKVKDELIVDGNDIELVSRSCALINQKCHVK 168
Query: 501 NK 506
NK
Sbjct: 169 NK 170
>ref|XP_002891031.1| 60S ribosomal protein L9 [Arabidopsis lyrata subsp. lyrata]
gi|297336873|gb|EFH67290.1| 60S ribosomal protein L9
[Arabidopsis lyrata subsp. lyrata]
Length = 194
Score = 153 bits (387), Expect(2) = 2e-63
Identities = 73/87 (83%), Positives = 82/87 (94%)
Frame = +2
Query: 2 AKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKVDSWFGSRKTSASIRTALSHVG 181
AK+I VEGP+GKLVR+FKHLNLDFQLIK+ E GK+ LK+DSWFGSRKTSASIRTALSHV
Sbjct: 22 AKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKMLKIDSWFGSRKTSASIRTALSHVD 81
Query: 182 NLINGVTKGYRYKMRFVYAHFPINASI 262
NLI+GVT+G+RYKMRFVYAHFPINASI
Sbjct: 82 NLISGVTRGFRYKMRFVYAHFPINASI 108
Score = 114 bits (285), Expect(2) = 2e-63
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +3
Query: 315 GDAKGIEIRNFLGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCH 494
GD K IEIRNFLGEK+VRKV+MLDGVTI+RSEKVKDE++LDGNDIELVSRS ALINQKCH
Sbjct: 110 GDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCH 169
Query: 495 VKNK 506
VK K
Sbjct: 170 VKKK 173
>gb|ADN33776.1| 60S ribosomal protein l9 [Cucumis melo subsp. melo]
Length = 194
Score = 153 bits (386), Expect(2) = 3e-63
Identities = 72/88 (81%), Positives = 82/88 (93%)
Frame = +2
Query: 2 AKMITVEGPKGKLVRNFKHLNLDFQLIKNRENGKRQLKVDSWFGSRKTSASIRTALSHVG 181
AK+I VEGP+GKLVRNFKHLNLDFQLI + + GK++LK+D+WFGSRKTSA+IRTALSHV
Sbjct: 22 AKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKIDAWFGSRKTSAAIRTALSHVE 81
Query: 182 NLINGVTKGYRYKMRFVYAHFPINASIS 265
NLI GVTKGYRYKMRFVYAHFPINASI+
Sbjct: 82 NLITGVTKGYRYKMRFVYAHFPINASIT 109
Score = 114 bits (285), Expect(2) = 3e-63
Identities = 56/61 (91%), Positives = 60/61 (98%)
Frame = +3
Query: 324 KGIEIRNFLGEKRVRKVDMLDGVTILRSEKVKDELILDGNDIELVSRSAALINQKCHVKN 503
K IEIRNFLGEK+VRKVDMLDGV+I+RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKN
Sbjct: 113 KSIEIRNFLGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKN 172
Query: 504 K 506
K
Sbjct: 173 K 173