BLASTX nr result

ID: Coptis25_contig00004456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004456
         (2066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535730.1| PREDICTED: uncharacterized protein LOC100784...   204   7e-50
ref|XP_003555231.1| PREDICTED: uncharacterized protein LOC100776...   203   2e-49
ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247...   201   8e-49
emb|CBI27037.3| unnamed protein product [Vitis vinifera]              201   8e-49
ref|XP_004159318.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   199   3e-48

>ref|XP_003535730.1| PREDICTED: uncharacterized protein LOC100784523 [Glycine max]
          Length = 990

 Score =  204 bits (519), Expect = 7e-50
 Identities = 96/110 (87%), Positives = 105/110 (95%)
 Frame = +3

Query: 3    SNNDMLRLHMELKGPFPKKMLRKGGFTDQHFDHDLNFYATEEDPVTKKAVKRLLLNIKPK 182
            +NNDMLRLHMELKGPFPKKMLRKG FT+QHFD DLNF ATEEDPVTKK +KRL+LNIKPK
Sbjct: 881  TNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKTIKRLILNIKPK 940

Query: 183  DIGTIITGSPGEDTKMLANFKDLLERVFVLDPEKRMTVSQALSHPFITGK 332
            DIGT+ITGSPGED KMLANFKDLLE+VFVLDP+KR+TVSQAL+HPFITGK
Sbjct: 941  DIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK 990


>ref|XP_003555231.1| PREDICTED: uncharacterized protein LOC100776908 [Glycine max]
          Length = 989

 Score =  203 bits (516), Expect = 2e-49
 Identities = 95/110 (86%), Positives = 105/110 (95%)
 Frame = +3

Query: 3    SNNDMLRLHMELKGPFPKKMLRKGGFTDQHFDHDLNFYATEEDPVTKKAVKRLLLNIKPK 182
            +NNDMLRLHMELKGPFPKKMLRKG FT+QHFD DLNF ATEEDPVTK+ +KRL+LNIKPK
Sbjct: 880  TNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKRTIKRLILNIKPK 939

Query: 183  DIGTIITGSPGEDTKMLANFKDLLERVFVLDPEKRMTVSQALSHPFITGK 332
            DIGT+ITGSPGED KMLANFKDLLE+VFVLDP+KR+TVSQAL+HPFITGK
Sbjct: 940  DIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK 989


>ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247382 [Vitis vinifera]
          Length = 1119

 Score =  201 bits (510), Expect = 8e-49
 Identities = 94/110 (85%), Positives = 102/110 (92%)
 Frame = +3

Query: 3    SNNDMLRLHMELKGPFPKKMLRKGGFTDQHFDHDLNFYATEEDPVTKKAVKRLLLNIKPK 182
            SNNDMLRLHMELKGPFPKKMLRKG FTDQHFD DLNF+ATEEDPVTKK +KRL++NI+PK
Sbjct: 1010 SNNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKTIKRLIMNIRPK 1069

Query: 183  DIGTIITGSPGEDTKMLANFKDLLERVFVLDPEKRMTVSQALSHPFITGK 332
            DIGTII+ SPGED KM  NFKDLLE++FVLDPEKRMTVSQAL HPFITGK
Sbjct: 1070 DIGTIISSSPGEDPKMAVNFKDLLEKIFVLDPEKRMTVSQALCHPFITGK 1119


>emb|CBI27037.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score =  201 bits (510), Expect = 8e-49
 Identities = 94/110 (85%), Positives = 102/110 (92%)
 Frame = +3

Query: 3    SNNDMLRLHMELKGPFPKKMLRKGGFTDQHFDHDLNFYATEEDPVTKKAVKRLLLNIKPK 182
            SNNDMLRLHMELKGPFPKKMLRKG FTDQHFD DLNF+ATEEDPVTKK +KRL++NI+PK
Sbjct: 889  SNNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKTIKRLIMNIRPK 948

Query: 183  DIGTIITGSPGEDTKMLANFKDLLERVFVLDPEKRMTVSQALSHPFITGK 332
            DIGTII+ SPGED KM  NFKDLLE++FVLDPEKRMTVSQAL HPFITGK
Sbjct: 949  DIGTIISSSPGEDPKMAVNFKDLLEKIFVLDPEKRMTVSQALCHPFITGK 998


>ref|XP_004159318.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           PRP4 homolog [Cucumis sativus]
          Length = 712

 Score =  199 bits (505), Expect = 3e-48
 Identities = 93/110 (84%), Positives = 104/110 (94%)
 Frame = +3

Query: 3   SNNDMLRLHMELKGPFPKKMLRKGGFTDQHFDHDLNFYATEEDPVTKKAVKRLLLNIKPK 182
           SNNDMLRLHMELKGPFPKKMLRKG FTDQHFD DLNF+A+EEDPVTKK +KR+++NIKPK
Sbjct: 603 SNNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHASEEDPVTKKTIKRIIVNIKPK 662

Query: 183 DIGTIITGSPGEDTKMLANFKDLLERVFVLDPEKRMTVSQALSHPFITGK 332
           DIG+II GSP ED KMLANFKDLL+++FVLDPEKRMTVSQAL+HPFITGK
Sbjct: 663 DIGSIIRGSPCEDPKMLANFKDLLDKIFVLDPEKRMTVSQALNHPFITGK 712


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