BLASTX nr result

ID: Coptis25_contig00004455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004455
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549822.1| PREDICTED: high-affinity nitrate transporter...   236   1e-59
ref|XP_003525590.1| PREDICTED: high-affinity nitrate transporter...   234   4e-59
dbj|BAI63584.1| component of high affinity nitrate transporter [...   227   3e-57
ref|XP_002279861.1| PREDICTED: high-affinity nitrate transporter...   224   2e-56
emb|CAN71077.1| hypothetical protein VITISV_021663 [Vitis vinifera]   224   3e-56

>ref|XP_003549822.1| PREDICTED: high-affinity nitrate transporter 3.1-like [Glycine max]
          Length = 208

 Score =  236 bits (601), Expect = 1e-59
 Identities = 122/183 (66%), Positives = 138/183 (75%), Gaps = 4/183 (2%)
 Frame = -2

Query: 839 CFFGTCYGKGLFSSLQRTLVANASTKQGEVLKSGLDKITVTWTLNQSFPASTADAYKQVK 660
           C  G+CYGK  FSSL+RTL   AS KQ +VL++GLDKITVTW LN++ PA T  AYK +K
Sbjct: 16  CLAGSCYGKVHFSSLKRTLDVTASPKQEQVLEAGLDKITVTWALNKTLPAGTDSAYKTIK 75

Query: 659 VKLCFAPISQKDRAWRXXXXXXXXXXTCQFTIADTPYDAS--TVQ--EWLVERDVPTATY 492
           +KLC+APISQKDRAWR          TCQ  I   PYDAS  TVQ  EWLVERDVP ATY
Sbjct: 76  LKLCYAPISQKDRAWRKTEDELKRDKTCQHKIVAKPYDASNKTVQRFEWLVERDVPKATY 135

Query: 491 FVRVYAVDSSGHEMAYGQTTDAKKTTNLFEIQGISGRHVSLDIAAGCFSAFSVVSLFGFF 312
           FVR YA DS+  E+AYGQTTDAKK+TNLFEI  +SGRH SLDI + CFSAFSVVSLF FF
Sbjct: 136 FVRAYAFDSNDEEVAYGQTTDAKKSTNLFEINAVSGRHASLDICSICFSAFSVVSLFVFF 195

Query: 311 YVE 303
           Y+E
Sbjct: 196 YIE 198


>ref|XP_003525590.1| PREDICTED: high-affinity nitrate transporter 3.1-like [Glycine max]
          Length = 208

 Score =  234 bits (596), Expect = 4e-59
 Identities = 120/183 (65%), Positives = 137/183 (74%), Gaps = 4/183 (2%)
 Frame = -2

Query: 839 CFFGTCYGKGLFSSLQRTLVANASTKQGEVLKSGLDKITVTWTLNQSFPASTADAYKQVK 660
           C  G+CYGK  FS+L+RTL   AS KQG+VL++GLDKITVTW LN++ PA T  AYK +K
Sbjct: 16  CLAGSCYGKVHFSTLKRTLDVTASPKQGQVLEAGLDKITVTWALNKTLPAGTDSAYKTIK 75

Query: 659 VKLCFAPISQKDRAWRXXXXXXXXXXTCQFTIADTPYDAS--TVQ--EWLVERDVPTATY 492
           +KLC+APISQKDRAWR          TCQ  I   PYDAS  TVQ  EWLVERDVP ATY
Sbjct: 76  LKLCYAPISQKDRAWRKTEDELNRDKTCQHKIVAKPYDASNKTVQRYEWLVERDVPKATY 135

Query: 491 FVRVYAVDSSGHEMAYGQTTDAKKTTNLFEIQGISGRHVSLDIAAGCFSAFSVVSLFGFF 312
           FVR YA DS+  E+AYGQTTD KK+TNLFEI  +SGRH SLDI + CFS FSVVSLF FF
Sbjct: 136 FVRAYAFDSNDAEVAYGQTTDGKKSTNLFEINAVSGRHASLDICSICFSVFSVVSLFFFF 195

Query: 311 YVE 303
           Y+E
Sbjct: 196 YIE 198


>dbj|BAI63584.1| component of high affinity nitrate transporter [Lotus japonicus]
          Length = 202

 Score =  227 bits (579), Expect = 3e-57
 Identities = 114/183 (62%), Positives = 138/183 (75%), Gaps = 4/183 (2%)
 Frame = -2

Query: 839 CFFGTCYGKGLFSSLQRTLVANASTKQGEVLKSGLDKITVTWTLNQSFPASTADAYKQVK 660
           C  GTCYGK LFSSL++TL   AS K G+V+++GLD ITVTW LN++ PA T  +YK +K
Sbjct: 15  CLAGTCYGKVLFSSLKKTLDVTASPKHGQVVEAGLDTITVTWALNKTLPAGTDSSYKTIK 74

Query: 659 VKLCFAPISQKDRAWRXXXXXXXXXXTCQFTIADTPYDAS--TVQ--EWLVERDVPTATY 492
           VKLC+APISQ+DRAWR          TCQ  I   PYDAS  TV   EWL+ERDVP ATY
Sbjct: 75  VKLCYAPISQQDRAWRKTEDELSRDKTCQHKIVAKPYDASNKTVHTFEWLIERDVPEATY 134

Query: 491 FVRVYAVDSSGHEMAYGQTTDAKKTTNLFEIQGISGRHVSLDIAAGCFSAFSVVSLFGFF 312
           FVR YA+DS+  ++ YGQT+DAKKT+NLF+IQ I+GRH+SLDI + CFSAFSVVSL  FF
Sbjct: 135 FVRAYALDSNDVQVGYGQTSDAKKTSNLFKIQAITGRHLSLDICSACFSAFSVVSLIFFF 194

Query: 311 YVE 303
           Y+E
Sbjct: 195 YIE 197


>ref|XP_002279861.1| PREDICTED: high-affinity nitrate transporter 3.2 [Vitis vinifera]
           gi|297733682|emb|CBI14929.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score =  224 bits (572), Expect = 2e-56
 Identities = 118/180 (65%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
 Frame = -2

Query: 839 CFFGTCYGKGLFSSLQRTLVANASTKQGEVLKSGLDKITVTWTLNQSFPASTADAYKQVK 660
           C    C G   FSSLQRTL+  AS K GEVLKSG DKITVTW LNQS+PA T  AYK VK
Sbjct: 15  CLLQICSG-AYFSSLQRTLIVTASPKAGEVLKSGEDKITVTWGLNQSYPAGTDSAYKTVK 73

Query: 659 VKLCFAPISQKDRAWRXXXXXXXXXXTCQFTIADTPYDASTVQ-EWLVERDVPTATYFVR 483
           VKLC+APISQ DRAWR          TCQ  I   PY AS    EW +E+DVPTATYF+R
Sbjct: 74  VKLCYAPISQVDRAWRKTVDHLTKDKTCQHKIVSQPYKASNNSVEWTIEKDVPTATYFIR 133

Query: 482 VYAVDSSGHEMAYGQTTDAKKTTNLFEIQGISGRHVSLDIAAGCFSAFSVVSLFGFFYVE 303
            YA D+   E+AYGQTTDA KTTNLF I+ I+GRH SLDIAA CFSAFSVVSL GFF+VE
Sbjct: 134 AYAYDAEDQEVAYGQTTDAHKTTNLFGIEAITGRHASLDIAAVCFSAFSVVSLCGFFWVE 193


>emb|CAN71077.1| hypothetical protein VITISV_021663 [Vitis vinifera]
          Length = 201

 Score =  224 bits (571), Expect = 3e-56
 Identities = 117/180 (65%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
 Frame = -2

Query: 839 CFFGTCYGKGLFSSLQRTLVANASTKQGEVLKSGLDKITVTWTLNQSFPASTADAYKQVK 660
           C    C G   FSSLQRTL+  AS K GEVLKSG DKITVTW LNQS+PA T  AYK VK
Sbjct: 15  CLLQICSG-AYFSSLQRTLIVTASPKAGEVLKSGEDKITVTWGLNQSYPAGTDSAYKTVK 73

Query: 659 VKLCFAPISQKDRAWRXXXXXXXXXXTCQFTIADTPYDASTVQ-EWLVERDVPTATYFVR 483
           VKLC+APISQ DRAWR          TCQ  I   PY AS    EW +E+DVPTATYF+R
Sbjct: 74  VKLCYAPISQVDRAWRKTVDHLTKDKTCQHKIVSQPYKASNNSVEWTIEKDVPTATYFIR 133

Query: 482 VYAVDSSGHEMAYGQTTDAKKTTNLFEIQGISGRHVSLDIAAGCFSAFSVVSLFGFFYVE 303
            YA D+   E+AYGQTTDA KTTNLF I+ I+GRH SLDIAA CFSAFSV+SL GFF+VE
Sbjct: 134 AYAYDAEDQEVAYGQTTDAHKTTNLFGIEAITGRHASLDIAAVCFSAFSVISLCGFFWVE 193


Top