BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004453
         (1489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   727   0.0  
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              721   0.0  
ref|XP_002323859.1| condensin complex components subunit [Populu...   721   0.0  
ref|XP_002534418.1| Structural maintenance of chromosome, putati...   716   0.0  
ref|NP_001190492.1| structural maintenance of chromosomes protei...   710   0.0  

>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Vitis vinifera]
          Length = 1486

 Score =  727 bits (1877), Expect = 0.0
 Identities = 371/472 (78%), Positives = 413/472 (87%)
 Frame = -3

Query: 1484 SLNEQHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASG 1305
            SL  QH+Y+EKQLDSLKAAS+PRKDEL+RL  L +TI+ E+KE+ERL  GS +LK+KA  
Sbjct: 1015 SLKSQHSYLEKQLDSLKAASKPRKDELNRLEVLNKTISAEKKEIERLIEGSKQLKDKALE 1074

Query: 1304 LQSKIENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKK 1125
            LQSKIENAGGE+LK QK+KVNKIQ DIDK+NTEINR KV I T  KM+KKL KGIEE+KK
Sbjct: 1075 LQSKIENAGGERLKLQKSKVNKIQFDIDKSNTEINRHKVQIETGQKMMKKLKKGIEESKK 1134

Query: 1124 EKERFLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQ 945
            EK+R + EKE L    K+IE +AF VQDNYNKTQ+LID+HKDVLD AK +Y  LKKT+D+
Sbjct: 1135 EKDRVVDEKEKLHLSHKDIEQKAFSVQDNYNKTQELIDQHKDVLDKAKSDYEKLKKTVDE 1194

Query: 944  MRASEVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXKHMQQIQKDAVDPEKLQAT 765
            +RASEVD DYKLQDM+KL KE EMKGK Y            KHM+QIQKD VDPEKLQAT
Sbjct: 1195 LRASEVDVDYKLQDMKKLYKELEMKGKGYKRKLEELQVALVKHMEQIQKDLVDPEKLQAT 1254

Query: 764  LGDLTLRESCELKRSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQER 585
            L D TL E C LKR+LEMVAL+EAQLKE+NPNLDSISEYR+K S+Y++RV++LNMVTQER
Sbjct: 1255 LADKTLTEDCGLKRALEMVALIEAQLKEMNPNLDSISEYRRKVSVYNERVQDLNMVTQER 1314

Query: 584  DDLKKHYDELRKKRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 405
            DD+KK YDE +K+R+DEFMAGF+TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS
Sbjct: 1315 DDVKKQYDEWKKRRMDEFMAGFHTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 1374

Query: 404  VRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYV 225
            VRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYV
Sbjct: 1375 VRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYV 1434

Query: 224  KDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICENAA 69
            KDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF +CE AA
Sbjct: 1435 KDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1486


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  721 bits (1862), Expect = 0.0
 Identities = 372/478 (77%), Positives = 413/478 (86%), Gaps = 6/478 (1%)
 Frame = -3

Query: 1484 SLNEQHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASG 1305
            SL  QH+Y+EKQLDSLKAAS+PRKDEL+RL  L +TI+ E+KE+ERL  GS +LK+KA  
Sbjct: 776  SLKSQHSYLEKQLDSLKAASKPRKDELNRLEVLNKTISAEKKEIERLIEGSKQLKDKALE 835

Query: 1304 LQSKIENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKK 1125
            LQSKIENAGGE+LK QK+KVNKIQ DIDK+NTEINR KV I T  KM+KKL KGIEE+KK
Sbjct: 836  LQSKIENAGGERLKLQKSKVNKIQFDIDKSNTEINRHKVQIETGQKMMKKLKKGIEESKK 895

Query: 1124 EKERFLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQ 945
            EK+R + EKE L    K+IE +AF VQDNYNKTQ+LID+HKDVLD AK +Y  LKKT+D+
Sbjct: 896  EKDRVVDEKEKLHLSHKDIEQKAFSVQDNYNKTQELIDQHKDVLDKAKSDYEKLKKTVDE 955

Query: 944  MRASEVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXKHMQQIQKDAVDPEKLQAT 765
            +RASEVD DYKLQDM+KL KE EMKGK Y            KHM+QIQKD VDPEKLQAT
Sbjct: 956  LRASEVDVDYKLQDMKKLYKELEMKGKGYKRKLEELQVALVKHMEQIQKDLVDPEKLQAT 1015

Query: 764  LGDLTLRESCELKRSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQER 585
            L D TL E C LKR+LEMVAL+EAQLKE+NPNLDSISEYR+K S+Y++RV++LNMVTQER
Sbjct: 1016 LADKTLTEDCGLKRALEMVALIEAQLKEMNPNLDSISEYRRKVSVYNERVQDLNMVTQER 1075

Query: 584  DDLKKHYDELRKKRL------DEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFS 423
            DD+KK YDE +K+RL      DEFMAGF+TISLKLKEMYQMITLGGDAELELVDSLDPFS
Sbjct: 1076 DDVKKQYDEWKKRRLVYFTLMDEFMAGFHTISLKLKEMYQMITLGGDAELELVDSLDPFS 1135

Query: 422  EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS 243
            EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS
Sbjct: 1136 EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS 1195

Query: 242  IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICENAA 69
            IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF +CE AA
Sbjct: 1196 IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1253


>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
            gi|222866861|gb|EEF03992.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1256

 Score =  721 bits (1861), Expect = 0.0
 Identities = 367/478 (76%), Positives = 411/478 (85%), Gaps = 6/478 (1%)
 Frame = -3

Query: 1484 SLNEQHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASG 1305
            SLN +H+Y+EKQL SLKAAS+P+KDELDRL ELK  I TEEKE++RL  GS KLKEKA  
Sbjct: 779  SLNTEHSYLEKQLGSLKAASEPKKDELDRLEELKRIIVTEEKEIDRLIQGSKKLKEKALE 838

Query: 1304 LQSKIENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKK 1125
            LQSKIENAGGE+LK QKAKVN+IQSD+DKN+TEINR KV I T  KMIKKLTKGIE+++K
Sbjct: 839  LQSKIENAGGERLKSQKAKVNRIQSDMDKNSTEINRHKVQIETGHKMIKKLTKGIEDSRK 898

Query: 1124 EKERFLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQ 945
            EKER   E+E L  +FKEIE +AF VQ+NY KTQ+LID+HK+VLD AK EY  +KK +D+
Sbjct: 899  EKERLTEEREKLRGIFKEIEEKAFAVQENYKKTQELIDQHKEVLDKAKSEYEKVKKIVDE 958

Query: 944  MRASEVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXKHMQQIQKDAVDPEKLQAT 765
            +RASEVDADY+LQDM+K  KE E+KGK Y             HM+Q QK+  DPEKLQAT
Sbjct: 959  LRASEVDADYRLQDMKKSYKELELKGKGYKKKLDDLQNALLHHMEQTQKELEDPEKLQAT 1018

Query: 764  LGDLTLRESCELKRSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQER 585
            L D TL E+C+LKR+LE V LLEAQLK++NPNLDSISEYR+K S Y++RVEELN+VTQ+R
Sbjct: 1019 LADKTLAEACDLKRALERVVLLEAQLKDMNPNLDSISEYRRKVSSYNERVEELNLVTQQR 1078

Query: 584  DDLKKHYDELRKKR------LDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFS 423
            DD+K+ YDE RKKR      LDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFS
Sbjct: 1079 DDIKRQYDEWRKKRLVFSFLLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFS 1138

Query: 422  EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS 243
            EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS
Sbjct: 1139 EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS 1198

Query: 242  IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICENAA 69
            IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF +C+NAA
Sbjct: 1199 IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCQNAA 1256


>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
            gi|223525329|gb|EEF27966.1| Structural maintenance of
            chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  716 bits (1849), Expect = 0.0
 Identities = 370/486 (76%), Positives = 413/486 (84%), Gaps = 14/486 (2%)
 Frame = -3

Query: 1484 SLNEQHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASG 1305
            SLN +H+Y+EKQL SL+AASQP+KDELDRL ELK+ I++EE E++RL  GS KLKEKA  
Sbjct: 774  SLNSEHSYLEKQLGSLEAASQPKKDELDRLKELKKIISSEEMEIDRLTQGSKKLKEKALE 833

Query: 1304 LQSKIENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKK 1125
            LQ+KIENAGGE LK QKAKV KIQS+IDK +TEINR KV I T  KMIKKLTKGIE++KK
Sbjct: 834  LQNKIENAGGETLKAQKAKVKKIQSEIDKTSTEINRQKVQIETNQKMIKKLTKGIEDSKK 893

Query: 1124 EKERFLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQ 945
            EK+RF+ EKE L SVFKEIE +AF VQ+NY KTQ+LID+HK+VLD AK EY ++KK +D+
Sbjct: 894  EKDRFVEEKEKLKSVFKEIEEKAFAVQENYKKTQQLIDQHKEVLDKAKSEYENVKKIVDE 953

Query: 944  MRASEVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXKHMQQIQKDAVDPEKLQAT 765
            +RASEVDADYKLQDM+K  KE E+KGK Y             HM+QIQKD VDPEKLQAT
Sbjct: 954  LRASEVDADYKLQDMKKCYKELELKGKGYKKKLDDLQNALTHHMEQIQKDLVDPEKLQAT 1013

Query: 764  LGDLTLRESCELKRSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQER 585
            L D TL ++C+L+R++E VALLEAQLKE+NPNL+SISEYR K SLY+ RVEELN VTQ+R
Sbjct: 1014 LADETLAKACDLRRAMETVALLEAQLKEMNPNLESISEYRGKVSLYNGRVEELNTVTQQR 1073

Query: 584  DDLKKHYDELRKKR--------------LDEFMAGFNTISLKLKEMYQMITLGGDAELEL 447
            DD+KK +DE RKKR              LDEFMAGFNTISLKLKEMYQMITLGGDAELEL
Sbjct: 1074 DDIKKQHDEWRKKRQDYCHLYTLVMLLMLDEFMAGFNTISLKLKEMYQMITLGGDAELEL 1133

Query: 446  VDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDA 267
            VDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDA
Sbjct: 1134 VDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDA 1193

Query: 266  ALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFA 87
            ALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF 
Sbjct: 1194 ALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFV 1253

Query: 86   ICENAA 69
            +C NAA
Sbjct: 1254 VCGNAA 1259


>ref|NP_001190492.1| structural maintenance of chromosomes protein 4 [Arabidopsis
            thaliana] gi|332008312|gb|AED95695.1| structural
            maintenance of chromosomes protein 4 [Arabidopsis
            thaliana]
          Length = 1244

 Score =  710 bits (1832), Expect = 0.0
 Identities = 360/469 (76%), Positives = 403/469 (85%)
 Frame = -3

Query: 1484 SLNEQHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASG 1305
            SLN +HNY+EKQL SL+AASQP+ DE+DRL ELK+ I+ EEKE+E L  GS +LK+KA  
Sbjct: 772  SLNSEHNYLEKQLASLEAASQPKTDEIDRLKELKKIISKEEKEIENLEKGSKQLKDKALE 831

Query: 1304 LQSKIENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKK 1125
            LQ+ IENAGGEKLK QKAKV KIQ+DIDKNNTEINRC V I T  K+IKKLTKGIEEA +
Sbjct: 832  LQTNIENAGGEKLKGQKAKVEKIQTDIDKNNTEINRCNVQIETNQKLIKKLTKGIEEATR 891

Query: 1124 EKERFLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQ 945
            EKER   EKENL   FK+I  +AF +Q+ Y KTQ+LIDEHKDVL GAK +Y +LKK++D+
Sbjct: 892  EKERLEGEKENLHVTFKDITQKAFEIQETYKKTQQLIDEHKDVLTGAKSDYENLKKSVDE 951

Query: 944  MRASEVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXKHMQQIQKDAVDPEKLQAT 765
            ++AS VDA++K+QDM+K   E EM+ K Y            KHM+QIQKD VDP+KLQAT
Sbjct: 952  LKASRVDAEFKVQDMKKKYNELEMREKGYKKKLNDLQIAFTKHMEQIQKDLVDPDKLQAT 1011

Query: 764  LGDLTLRESCELKRSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQER 585
            L D  L E+C+LKR+LEMVALLEAQLKELNPNLDSI+EYR K  LY+ RV+ELN VTQER
Sbjct: 1012 LMDNNLNEACDLKRALEMVALLEAQLKELNPNLDSIAEYRSKVELYNGRVDELNSVTQER 1071

Query: 584  DDLKKHYDELRKKRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 405
            DD +K YDELRK+RLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS
Sbjct: 1072 DDTRKQYDELRKRRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 1131

Query: 404  VRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYV 225
            VRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYV
Sbjct: 1132 VRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYV 1191

Query: 224  KDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICE 78
            KDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFA+C+
Sbjct: 1192 KDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQ 1240