BLASTX nr result

ID: Coptis25_contig00004446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004446
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516765.1| wall-associated kinase, putative [Ricinus co...    66   3e-09
ref|XP_002524904.1| wall-associated kinase, putative [Ricinus co...    65   6e-09
ref|XP_003551840.1| PREDICTED: probable receptor-like protein ki...    63   2e-08
ref|XP_002890692.1| kinase family protein [Arabidopsis lyrata su...    63   3e-08
emb|CBI15487.3| unnamed protein product [Vitis vinifera]               63   3e-08

>ref|XP_002516765.1| wall-associated kinase, putative [Ricinus communis]
           gi|223544138|gb|EEF45663.1| wall-associated kinase,
           putative [Ricinus communis]
          Length = 685

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
 Frame = -3

Query: 255 LQQEKEMRPCMVEVLEILRGIGSEEYKKKTTEEMDISADARLLKNSL-PLSPDS--VTDK 85
           LQQEK+MRP M EVLE L+ I SE+Y  + TE +DI  D  +L N + P SPD    TDK
Sbjct: 612 LQQEKDMRPTMAEVLEALKKIESEDYGSEKTEALDIKEDDVVLLNHVAPFSPDESVTTDK 671

Query: 84  WVSKSTTPNTS 52
           WVS S+   T+
Sbjct: 672 WVSSSSITTTT 682


>ref|XP_002524904.1| wall-associated kinase, putative [Ricinus communis]
           gi|223535867|gb|EEF37528.1| wall-associated kinase,
           putative [Ricinus communis]
          Length = 694

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
 Frame = -3

Query: 255 LQQEKEMRPCMVEVLEILRGIGSEEYK-KKTTEEMDISADA-RLLKNS-LPLSPDSVTDK 85
           LQ  KE+RP M EVLE L+ I +++Y  +K  EEMD  +D   LLK+  +P SPD+V  K
Sbjct: 623 LQSAKELRPSMGEVLEALKEIQTKDYTLQKAEEEMDGRSDGVGLLKSDPVPPSPDTVMIK 682

Query: 84  WVSKSTTPNTSG 49
           W+S STTPNTSG
Sbjct: 683 WISTSTTPNTSG 694


>ref|XP_003551840.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
            [Glycine max]
          Length = 1476

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
 Frame = -3

Query: 255  LQQEKEMRPCMVEVLEILRGIGSEE--YKKKTTEEMDISAD-ARLLKNSLPLSPDSVTDK 85
            LQQE+E+RP M EV+EILRGI S++    ++ TE +++  D ARLLK   P+SPDSV DK
Sbjct: 1406 LQQEREIRPSMNEVVEILRGIKSDDGLGAREETEVLEVRIDEARLLKKVSPVSPDSVVDK 1465

Query: 84   WVSKSTTPNTS 52
              S S+  N+S
Sbjct: 1466 CFSGSSVSNSS 1476


>ref|XP_002890692.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336534|gb|EFH66951.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 629

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 11/79 (13%)
 Frame = -3

Query: 255 LQQEKEMRPCMVEVLEILRGIGSEEYKKKTTEEMDIS----------ADARLLKN-SLPL 109
           LQQ+  MRP M +V++ L+GI +EE K  T +  + +           +A LLKN   P 
Sbjct: 547 LQQDSTMRPTMEQVVQELKGIQNEEQKCHTNDHREETITLHPSPPDWGEAALLKNMKFPR 606

Query: 108 SPDSVTDKWVSKSTTPNTS 52
           SP SVTD+W SKSTTPNTS
Sbjct: 607 SPISVTDQWTSKSTTPNTS 625


>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
 Frame = -3

Query: 255  LQQEKEMRPCMVEVLEILRGIGSEEYKKKTTEEMDISADA-RLLKNSL-PLSPDSVTDKW 82
            LQ EKEMRP M EVLE+L GI SE      TEE++I AD+  LLK+   P SPDSVT  W
Sbjct: 903  LQNEKEMRPAMDEVLEVLMGIESEGCNIVKTEEVEIPADSVGLLKSKQPPASPDSVTTNW 962

Query: 81   VSKSTTPNTS 52
             S  +T N S
Sbjct: 963  TSWPSTTNGS 972


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