BLASTX nr result
ID: Coptis25_contig00004422
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00004422 (1043 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27727.3| unnamed protein product [Vitis vinifera] 91 5e-16 ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244... 91 5e-16 ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g2624... 86 2e-14 gb|AFK38721.1| unknown [Lotus japonicus] 85 3e-14 ref|XP_002309449.1| predicted protein [Populus trichocarpa] gi|2... 84 4e-14 >emb|CBI27727.3| unnamed protein product [Vitis vinifera] Length = 107 Score = 90.9 bits (224), Expect = 5e-16 Identities = 54/107 (50%), Positives = 58/107 (54%) Frame = -1 Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534 MSMSQKLT + L+LYYVYTQLP RP Sbjct: 1 MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 60 Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393 GVMGSRFKKSGK+FPAG+VS S VMTGGYLHGILRSLH Sbjct: 61 LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 107 >ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244242 [Vitis vinifera] Length = 246 Score = 90.9 bits (224), Expect = 5e-16 Identities = 54/107 (50%), Positives = 58/107 (54%) Frame = -1 Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534 MSMSQKLT + L+LYYVYTQLP RP Sbjct: 140 MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 199 Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393 GVMGSRFKKSGK+FPAG+VS S VMTGGYLHGILRSLH Sbjct: 200 LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 246 >ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g26240-like [Brachypodium distachyon] Length = 209 Score = 85.9 bits (211), Expect = 2e-14 Identities = 49/107 (45%), Positives = 56/107 (52%) Frame = -1 Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534 +SMSQKLT + L+LY+V+TQLP+RP Sbjct: 102 LSMSQKLTLAYAALVGAGGVMGYMKSGSQKSLAAGGISALVLYFVHTQLPVRPVFASSIG 161 Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393 VMGSRFKKSGKIFPAG+VS SFVM GGY HGILRS H Sbjct: 162 LGISAALLTVMGSRFKKSGKIFPAGVVSLLSFVMVGGYFHGILRSSH 208 >gb|AFK38721.1| unknown [Lotus japonicus] Length = 226 Score = 85.1 bits (209), Expect = 3e-14 Identities = 47/107 (43%), Positives = 57/107 (53%) Frame = -1 Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534 +SMSQKLT + L+LYYV+T+LP+RP Sbjct: 120 LSMSQKLTLGYAALVGVGGLMGYLKSGSQKSLLAGGLSALLLYYVHTELPLRPVFASSLG 179 Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393 VMGSRFKKSGK+FPAG+VS S +MTGGYLHGI+RS H Sbjct: 180 LGISAALLAVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH 226 >ref|XP_002309449.1| predicted protein [Populus trichocarpa] gi|222855425|gb|EEE92972.1| predicted protein [Populus trichocarpa] Length = 109 Score = 84.3 bits (207), Expect = 4e-14 Identities = 49/107 (45%), Positives = 55/107 (51%) Frame = -1 Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534 +SMSQKLT + +LYYVYTQLP P Sbjct: 3 LSMSQKLTLGYAALVGIGGAMGYMKSGSQKSLLAGGISASVLYYVYTQLPANPVYASSIG 62 Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393 GVMGSRF KS KIFPAG+VS SF+MTGGYLHGILRS+H Sbjct: 63 LGISAALMGVMGSRFLKSRKIFPAGVVSLVSFIMTGGYLHGILRSMH 109