BLASTX nr result

ID: Coptis25_contig00004422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004422
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27727.3| unnamed protein product [Vitis vinifera]               91   5e-16
ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244...    91   5e-16
ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g2624...    86   2e-14
gb|AFK38721.1| unknown [Lotus japonicus]                               85   3e-14
ref|XP_002309449.1| predicted protein [Populus trichocarpa] gi|2...    84   4e-14

>emb|CBI27727.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 54/107 (50%), Positives = 58/107 (54%)
 Frame = -1

Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534
           MSMSQKLT               +               L+LYYVYTQLP RP       
Sbjct: 1   MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 60

Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393
                   GVMGSRFKKSGK+FPAG+VS  S VMTGGYLHGILRSLH
Sbjct: 61  LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 107


>ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244242 [Vitis vinifera]
          Length = 246

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 54/107 (50%), Positives = 58/107 (54%)
 Frame = -1

Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534
           MSMSQKLT               +               L+LYYVYTQLP RP       
Sbjct: 140 MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 199

Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393
                   GVMGSRFKKSGK+FPAG+VS  S VMTGGYLHGILRSLH
Sbjct: 200 LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 246


>ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g26240-like [Brachypodium
           distachyon]
          Length = 209

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 49/107 (45%), Positives = 56/107 (52%)
 Frame = -1

Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534
           +SMSQKLT               +               L+LY+V+TQLP+RP       
Sbjct: 102 LSMSQKLTLAYAALVGAGGVMGYMKSGSQKSLAAGGISALVLYFVHTQLPVRPVFASSIG 161

Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393
                    VMGSRFKKSGKIFPAG+VS  SFVM GGY HGILRS H
Sbjct: 162 LGISAALLTVMGSRFKKSGKIFPAGVVSLLSFVMVGGYFHGILRSSH 208


>gb|AFK38721.1| unknown [Lotus japonicus]
          Length = 226

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 47/107 (43%), Positives = 57/107 (53%)
 Frame = -1

Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534
           +SMSQKLT               +               L+LYYV+T+LP+RP       
Sbjct: 120 LSMSQKLTLGYAALVGVGGLMGYLKSGSQKSLLAGGLSALLLYYVHTELPLRPVFASSLG 179

Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393
                    VMGSRFKKSGK+FPAG+VS  S +MTGGYLHGI+RS H
Sbjct: 180 LGISAALLAVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH 226


>ref|XP_002309449.1| predicted protein [Populus trichocarpa] gi|222855425|gb|EEE92972.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 49/107 (45%), Positives = 55/107 (51%)
 Frame = -1

Query: 713 MSMSQKLTXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXLILYYVYTQLPIRPXXXXXXX 534
           +SMSQKLT               +                +LYYVYTQLP  P       
Sbjct: 3   LSMSQKLTLGYAALVGIGGAMGYMKSGSQKSLLAGGISASVLYYVYTQLPANPVYASSIG 62

Query: 533 XXXXXXXXGVMGSRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 393
                   GVMGSRF KS KIFPAG+VS  SF+MTGGYLHGILRS+H
Sbjct: 63  LGISAALMGVMGSRFLKSRKIFPAGVVSLVSFIMTGGYLHGILRSMH 109


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