BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004407
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...   184   2e-78
emb|CBI26833.3| unnamed protein product [Vitis vinifera]              184   2e-78
ref|XP_002526002.1| protein with unknown function [Ricinus commu...   186   3e-77
ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag...   162   2e-72
ref|XP_004142300.1| PREDICTED: nuclear pore complex protein Nup1...   169   2e-71

>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis vinifera]
          Length = 1496

 Score =  184 bits (467), Expect(2) = 2e-78
 Identities = 102/162 (62%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
 Frame = -2

Query: 812  SRDKYICQIVQLGVQSPDRLFHKHLDRTMIDXXXXXXXXXXXGPDLVPFLQNAGRQPIQE 633
            SRDKYI QIVQLGVQS DR+FH++L RTMID           GPDLVPFLQNAGR+ +QE
Sbjct: 1028 SRDKYIRQIVQLGVQSSDRVFHEYLYRTMIDLGLENELLEYGGPDLVPFLQNAGRESLQE 1087

Query: 632  VRAVSAVTLAPS---LAGHSITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXRSTDS 462
            VRAVS++T   S   L G  I ++++KYF+LLARYYVLKRQH             RSTD+
Sbjct: 1088 VRAVSSITSTRSPVGLFGAPIPSNQTKYFDLLARYYVLKRQHVLAAHVLLRLAERRSTDA 1147

Query: 461  GDVPTLEQRWQYLSNAVLQAKNASSGDGLLGSARGAFDSGVV 336
            GDVPTLEQR QYLSNAVLQAKNAS+ DGL+GS RGA D+G++
Sbjct: 1148 GDVPTLEQRRQYLSNAVLQAKNASNSDGLVGSVRGASDNGLL 1189



 Score =  135 bits (339), Expect(2) = 2e-78
 Identities = 71/116 (61%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
 Frame = -3

Query: 358  GHSTVGLLEMLEGKLAVLQFQIKIKEELEAMASRLEGXXXXXXXXXXXP--QRPPTVDAN 185
            G S  GLL++LEGKLAVL+FQIKIK ELEA+ASRLE               +     D N
Sbjct: 1182 GASDNGLLDLLEGKLAVLRFQIKIKGELEAIASRLESSNVTSESVLNESCSESNLNADTN 1241

Query: 184  LTNAAQEKAKELSLNLKSLTILYNDYALPFELWEVCLEILYFASYSGDADSSIVRD 17
              N  QEKA+E+SL+LKS+T LYN+YA+PFELWE+CLE+LYFA+YSGDADSSIVR+
Sbjct: 1242 FANTVQEKAREISLDLKSITQLYNEYAVPFELWEICLEMLYFANYSGDADSSIVRE 1297


>emb|CBI26833.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  184 bits (467), Expect(2) = 2e-78
 Identities = 102/162 (62%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
 Frame = -2

Query: 812 SRDKYICQIVQLGVQSPDRLFHKHLDRTMIDXXXXXXXXXXXGPDLVPFLQNAGRQPIQE 633
           SRDKYI QIVQLGVQS DR+FH++L RTMID           GPDLVPFLQNAGR+ +QE
Sbjct: 270 SRDKYIRQIVQLGVQSSDRVFHEYLYRTMIDLGLENELLEYGGPDLVPFLQNAGRESLQE 329

Query: 632 VRAVSAVTLAPS---LAGHSITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXRSTDS 462
           VRAVS++T   S   L G  I ++++KYF+LLARYYVLKRQH             RSTD+
Sbjct: 330 VRAVSSITSTRSPVGLFGAPIPSNQTKYFDLLARYYVLKRQHVLAAHVLLRLAERRSTDA 389

Query: 461 GDVPTLEQRWQYLSNAVLQAKNASSGDGLLGSARGAFDSGVV 336
           GDVPTLEQR QYLSNAVLQAKNAS+ DGL+GS RGA D+G++
Sbjct: 390 GDVPTLEQRRQYLSNAVLQAKNASNSDGLVGSVRGASDNGLL 431



 Score =  135 bits (339), Expect(2) = 2e-78
 Identities = 71/116 (61%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
 Frame = -3

Query: 358 GHSTVGLLEMLEGKLAVLQFQIKIKEELEAMASRLEGXXXXXXXXXXXP--QRPPTVDAN 185
           G S  GLL++LEGKLAVL+FQIKIK ELEA+ASRLE               +     D N
Sbjct: 424 GASDNGLLDLLEGKLAVLRFQIKIKGELEAIASRLESSNVTSESVLNESCSESNLNADTN 483

Query: 184 LTNAAQEKAKELSLNLKSLTILYNDYALPFELWEVCLEILYFASYSGDADSSIVRD 17
             N  QEKA+E+SL+LKS+T LYN+YA+PFELWE+CLE+LYFA+YSGDADSSIVR+
Sbjct: 484 FANTVQEKAREISLDLKSITQLYNEYAVPFELWEICLEMLYFANYSGDADSSIVRE 539


>ref|XP_002526002.1| protein with unknown function [Ricinus communis]
            gi|223534734|gb|EEF36426.1| protein with unknown function
            [Ricinus communis]
          Length = 1490

 Score =  186 bits (471), Expect(2) = 3e-77
 Identities = 103/162 (63%), Positives = 118/162 (72%), Gaps = 3/162 (1%)
 Frame = -2

Query: 812  SRDKYICQIVQLGVQSPDRLFHKHLDRTMIDXXXXXXXXXXXGPDLVPFLQNAGRQPIQE 633
            SR KYI QIVQLGVQSPDRLFH++L RTMID           GPDLVPFLQNAGR+ +QE
Sbjct: 1024 SRRKYISQIVQLGVQSPDRLFHEYLYRTMIDLGLENELLEYGGPDLVPFLQNAGRETLQE 1083

Query: 632  VRAVSAVTLAPSLAGHS---ITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXRSTDS 462
            VRAV+AVT A S  GHS   +T +++KYF+LLARYYV KRQH             RSTD+
Sbjct: 1084 VRAVTAVTSATSSIGHSGAPVTANQAKYFDLLARYYVSKRQHMLAAHILLRLAERRSTDA 1143

Query: 461  GDVPTLEQRWQYLSNAVLQAKNASSGDGLLGSARGAFDSGVV 336
             DVPTLEQR QYLSNAVLQAKNAS   GL+GS +GA DSG++
Sbjct: 1144 RDVPTLEQRRQYLSNAVLQAKNASDSGGLVGSMKGALDSGLL 1185



 Score =  129 bits (325), Expect(2) = 3e-77
 Identities = 65/109 (59%), Positives = 82/109 (75%)
 Frame = -3

Query: 343  GLLEMLEGKLAVLQFQIKIKEELEAMASRLEGXXXXXXXXXXXPQRPPTVDANLTNAAQE 164
            GLL++LEGKL VL+FQIKIK+ELEA+ASRLE                   + +    A+E
Sbjct: 1183 GLLDLLEGKLVVLRFQIKIKDELEAIASRLESSSSMSEPVQNGSVPDNNANPDYAKVARE 1242

Query: 163  KAKELSLNLKSLTILYNDYALPFELWEVCLEILYFASYSGDADSSIVRD 17
            KAKELSL+LKS+T LYN+YA+PFELWE+CLE+LYFA+Y+GD DSSIVR+
Sbjct: 1243 KAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDTDSSIVRE 1291


>ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula]
            gi|355524966|gb|AET05420.1| Nuclear pore complex protein
            Nup155 [Medicago truncatula]
          Length = 1484

 Score =  162 bits (411), Expect(2) = 2e-72
 Identities = 89/159 (55%), Positives = 110/159 (69%)
 Frame = -2

Query: 812  SRDKYICQIVQLGVQSPDRLFHKHLDRTMIDXXXXXXXXXXXGPDLVPFLQNAGRQPIQE 633
            SR KYI QIVQLGVQSPDR+FH++L + MID           GPDL+PFL++AGR PI E
Sbjct: 1022 SRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLKSAGRTPIHE 1081

Query: 632  VRAVSAVTLAPSLAGHSITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXRSTDSGDV 453
            VRAV+A T     +G  +++++ KYFELLARYYVLKRQH              STD   V
Sbjct: 1082 VRAVTATTSPMGQSGAPMSSNQVKYFELLARYYVLKRQHMLAAHALLRLAGRPSTDG--V 1139

Query: 452  PTLEQRWQYLSNAVLQAKNASSGDGLLGSARGAFDSGVV 336
            PTLEQR QYLSNAVLQAKNA++ DGL+ S R + D+G++
Sbjct: 1140 PTLEQRCQYLSNAVLQAKNATNSDGLVSSTRSSSDTGLL 1178



 Score =  136 bits (343), Expect(2) = 2e-72
 Identities = 73/114 (64%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
 Frame = -3

Query: 352  STVGLLEMLEGKLAVLQFQIKIKEELEAMASRLE--GXXXXXXXXXXXPQRPPTVDANLT 179
            S  GLL+MLEGKLAVL+FQIKIKEELE MAS  E                  PTVDAN  
Sbjct: 1173 SDTGLLDMLEGKLAVLRFQIKIKEELEHMASSSEVLHSTSNSVENGLVSDASPTVDANFA 1232

Query: 178  NAAQEKAKELSLNLKSLTILYNDYALPFELWEVCLEILYFASYSGDADSSIVRD 17
            NA +EKAKELS +LKS+T LYN+YA+PF+LWE CLE+LYFA+YSGD+DSSIVR+
Sbjct: 1233 NATREKAKELSSDLKSITQLYNEYAVPFKLWETCLEMLYFANYSGDSDSSIVRE 1286


>ref|XP_004142300.1| PREDICTED: nuclear pore complex protein Nup155-like [Cucumis sativus]
          Length = 1492

 Score =  169 bits (428), Expect(2) = 2e-71
 Identities = 95/162 (58%), Positives = 111/162 (68%), Gaps = 3/162 (1%)
 Frame = -2

Query: 812  SRDKYICQIVQLGVQSPDRLFHKHLDRTMIDXXXXXXXXXXXGPDLVPFLQNAGRQPIQE 633
            +R KYI QIVQLGVQSPD++FH +L R+MID           GPDLVPFLQNAGR PIQE
Sbjct: 1024 TRSKYISQIVQLGVQSPDKIFHNYLYRSMIDLGLDNELLEYGGPDLVPFLQNAGRHPIQE 1083

Query: 632  VRAVSAVTLAPSLAGHS---ITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXRSTDS 462
            VRAVSA+T   S  G S     T+E+KYF+LLARYYV+KRQH             RS+D 
Sbjct: 1084 VRAVSALTAGASPIGQSGAVGATNEAKYFDLLARYYVMKRQHLLAAHVLLRLAGRRSSDP 1143

Query: 461  GDVPTLEQRWQYLSNAVLQAKNASSGDGLLGSARGAFDSGVV 336
            GDV TLE+R QYLSNAVLQAKNA+S  GL GS     D+G++
Sbjct: 1144 GDVLTLEERCQYLSNAVLQAKNANSSKGLAGSTPDTLDNGLL 1185



 Score =  126 bits (317), Expect(2) = 2e-71
 Identities = 64/111 (57%), Positives = 84/111 (75%), Gaps = 2/111 (1%)
 Frame = -3

Query: 343  GLLEMLEGKLAVLQFQIKIKEELEAMASRLEGXXXXXXXXXXXPQRPPTVDAN--LTNAA 170
            GLLE LEGKLAVL+FQ+KIKEELEA+ASR+E                  + AN  ++N A
Sbjct: 1183 GLLEQLEGKLAVLRFQMKIKEELEALASRIESVASTSDSVQNEMMTDNDLAANSIISNTA 1242

Query: 169  QEKAKELSLNLKSLTILYNDYALPFELWEVCLEILYFASYSGDADSSIVRD 17
            ++KAKELSL LK++T LYN+YA+PFELWE+CLE+LYFA+YS D ++SI+R+
Sbjct: 1243 RQKAKELSLELKTITQLYNEYAVPFELWEICLEMLYFANYSSDGNTSIIRE 1293