BLASTX nr result

ID: Coptis25_contig00004389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004389
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549533.1| PREDICTED: cellulose synthase A catalytic su...   249   4e-64
gb|ADD71499.1| cellulose synthase catalytic subunit [Gossypium h...   249   4e-64
ref|XP_002276890.2| PREDICTED: cellulose synthase A catalytic su...   249   4e-64
ref|XP_002276866.1| PREDICTED: cellulose synthase A catalytic su...   249   4e-64
emb|CAN73700.1| hypothetical protein VITISV_013112 [Vitis vinifera]   249   4e-64

>ref|XP_003549533.1| PREDICTED: cellulose synthase A catalytic subunit 7
            [UDP-forming]-like isoform 2 [Glycine max]
          Length = 1041

 Score =  249 bits (637), Expect = 4e-64
 Identities = 121/180 (67%), Positives = 141/180 (78%), Gaps = 8/180 (4%)
 Frame = -3

Query: 857  FLDDPQIGRKVCYIQFPQRFDGINRSDRYANRNSIFFNINMKGLDGIQGPVYVGTGYVFR 678
            FL DPQ G+KVCY+QFPQRFDGI+R DRYANRN++FF+INMKGLDGIQGP YVGTG VFR
Sbjct: 550  FLMDPQTGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPAYVGTGCVFR 609

Query: 677  RQALYGYNPPKGPKRPKMVSCDCCPCFGLLNKY----SNQNGVGSNLEGSSV----VKED 522
            RQALYGYNPPKGPKRPKMVSCDCCPCFG   K     ++ NG  ++L GS +    + +D
Sbjct: 610  RQALYGYNPPKGPKRPKMVSCDCCPCFGKRKKVKYEGNDANGEAASLRGSHIPNHSLDDD 669

Query: 521  KELLMS*MTFAKRFRQSATFVTSPLMEQGGVPTPYLLKSGSSAQRSIHIISCGYEDKTEW 342
            KE+LMS M F K+F QS+ FVTS LME+GGVP      S S  + +IH+ISCGYEDKTEW
Sbjct: 670  KEVLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPS--ASSASQLKEAIHVISCGYEDKTEW 727


>gb|ADD71499.1| cellulose synthase catalytic subunit [Gossypium hirsutum]
          Length = 1042

 Score =  249 bits (637), Expect = 4e-64
 Identities = 122/174 (70%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
 Frame = -3

Query: 857  FLDDPQIGRKVCYIQFPQRFDGINRSDRYANRNSIFFNINMKGLDGIQGPVYVGTGYVFR 678
            FL DPQIGRKVCY+QFPQRFDGI+R DRYANRN++FF+INMKGLDGIQGPVYVGTG VFR
Sbjct: 557  FLMDPQIGRKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFR 616

Query: 677  RQALYGYNPPKGPKRPKMVSCDCCPCFGLLNKYSNQNGVGSNLEGSSV--VKEDKELLMS 504
            RQALYGY PPKGPKRPKMVSC CCPCFG   K    +  G N  G S+   ++DKELLMS
Sbjct: 617  RQALYGYEPPKGPKRPKMVSCGCCPCFGRRRKDKKHSKDGGNANGLSLEAAEDDKELLMS 676

Query: 503  *MTFAKRFRQSATFVTSPLMEQGGVPTPYLLKSGSSAQRSIHIISCGYEDKTEW 342
             M F K+F QSA FVTS LMEQGGVP        +  + +IH+ISCGYEDKTEW
Sbjct: 677  HMNFEKKFGQSAIFVTSTLMEQGGVPPS--SSPAALLKEAIHVISCGYEDKTEW 728


>ref|XP_002276890.2| PREDICTED: cellulose synthase A catalytic subunit 7
            [UDP-forming]-like isoform 2 [Vitis vinifera]
            gi|297743668|emb|CBI36551.3| unnamed protein product
            [Vitis vinifera]
          Length = 1037

 Score =  249 bits (637), Expect = 4e-64
 Identities = 121/172 (70%), Positives = 137/172 (79%)
 Frame = -3

Query: 857  FLDDPQIGRKVCYIQFPQRFDGINRSDRYANRNSIFFNINMKGLDGIQGPVYVGTGYVFR 678
            FL DPQ GRKVCY+QFPQRFDGI+R+DRYANRN++FF+INMKGLDGIQGPVYVGTG VFR
Sbjct: 557  FLMDPQTGRKVCYVQFPQRFDGIDRNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFR 616

Query: 677  RQALYGYNPPKGPKRPKMVSCDCCPCFGLLNKYSNQNGVGSNLEGSSVVKEDKELLMS*M 498
            RQALYGY+PPKGPKRPKMVSCDCCPCFG   K       G N EG   ++EDKE+LMS M
Sbjct: 617  RQALYGYDPPKGPKRPKMVSCDCCPCFGRRKKLQKYAKHGENGEG---LEEDKEMLMSQM 673

Query: 497  TFAKRFRQSATFVTSPLMEQGGVPTPYLLKSGSSAQRSIHIISCGYEDKTEW 342
             F K+F QSA FVTS LMEQGGVP        +  + +IH+ISCGYEDKT+W
Sbjct: 674  NFEKKFGQSAIFVTSTLMEQGGVPPS--SSPAALLKEAIHVISCGYEDKTDW 723


>ref|XP_002276866.1| PREDICTED: cellulose synthase A catalytic subunit 7
            [UDP-forming]-like isoform 1 [Vitis vinifera]
          Length = 1025

 Score =  249 bits (637), Expect = 4e-64
 Identities = 121/172 (70%), Positives = 137/172 (79%)
 Frame = -3

Query: 857  FLDDPQIGRKVCYIQFPQRFDGINRSDRYANRNSIFFNINMKGLDGIQGPVYVGTGYVFR 678
            FL DPQ GRKVCY+QFPQRFDGI+R+DRYANRN++FF+INMKGLDGIQGPVYVGTG VFR
Sbjct: 545  FLMDPQTGRKVCYVQFPQRFDGIDRNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFR 604

Query: 677  RQALYGYNPPKGPKRPKMVSCDCCPCFGLLNKYSNQNGVGSNLEGSSVVKEDKELLMS*M 498
            RQALYGY+PPKGPKRPKMVSCDCCPCFG   K       G N EG   ++EDKE+LMS M
Sbjct: 605  RQALYGYDPPKGPKRPKMVSCDCCPCFGRRKKLQKYAKHGENGEG---LEEDKEMLMSQM 661

Query: 497  TFAKRFRQSATFVTSPLMEQGGVPTPYLLKSGSSAQRSIHIISCGYEDKTEW 342
             F K+F QSA FVTS LMEQGGVP        +  + +IH+ISCGYEDKT+W
Sbjct: 662  NFEKKFGQSAIFVTSTLMEQGGVPPS--SSPAALLKEAIHVISCGYEDKTDW 711


>emb|CAN73700.1| hypothetical protein VITISV_013112 [Vitis vinifera]
          Length = 1024

 Score =  249 bits (637), Expect = 4e-64
 Identities = 121/172 (70%), Positives = 137/172 (79%)
 Frame = -3

Query: 857  FLDDPQIGRKVCYIQFPQRFDGINRSDRYANRNSIFFNINMKGLDGIQGPVYVGTGYVFR 678
            FL DPQ GRKVCY+QFPQRFDGI+R+DRYANRN++FF+INMKGLDGIQGPVYVGTG VFR
Sbjct: 544  FLMDPQTGRKVCYVQFPQRFDGIDRNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFR 603

Query: 677  RQALYGYNPPKGPKRPKMVSCDCCPCFGLLNKYSNQNGVGSNLEGSSVVKEDKELLMS*M 498
            RQALYGY+PPKGPKRPKMVSCDCCPCFG   K       G N EG   ++EDKE+LMS M
Sbjct: 604  RQALYGYDPPKGPKRPKMVSCDCCPCFGRRKKLQKYAKHGENGEG---LEEDKEMLMSQM 660

Query: 497  TFAKRFRQSATFVTSPLMEQGGVPTPYLLKSGSSAQRSIHIISCGYEDKTEW 342
             F K+F QSA FVTS LMEQGGVP        +  + +IH+ISCGYEDKT+W
Sbjct: 661  NFEKKFGQSAIFVTSTLMEQGGVPPS--SSPAALLKEAIHVISCGYEDKTDW 710


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