BLASTX nr result

ID: Coptis25_contig00004388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004388
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234281.1| vacuolar H+-ATPase A1 subunit isoform [Solan...    88   8e-16
gb|AAA79992.1| V-ATPase 66 kDa subunit, partial [Acer pseudoplat...    86   4e-15
ref|XP_002451639.1| hypothetical protein SORBIDRAFT_04g005040 [S...    85   7e-15
sp|P49087.1|VATA_MAIZE RecName: Full=V-type proton ATPase cataly...    84   9e-15
gb|AFW66327.1| putative ATPase, V1 complex, subunit A protein [Z...    84   9e-15

>ref|NP_001234281.1| vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum]
           gi|27883932|gb|AAO23980.1| vacuolar H+-ATPase A1 subunit
           isoform [Solanum lycopersicum]
          Length = 623

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/48 (91%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
 Frame = -3

Query: 141 GSFS-NDTVLELEFQGVKKKVTMLQTWPVRSPRPVASKLAADTPLLTG 1
           G +S NDTVLELEFQGVKK+VTMLQTWPVRSPRPVASKLAADTPLLTG
Sbjct: 185 GQYSLNDTVLELEFQGVKKQVTMLQTWPVRSPRPVASKLAADTPLLTG 232


>gb|AAA79992.1| V-ATPase 66 kDa subunit, partial [Acer pseudoplatanus]
          Length = 336

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/48 (87%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
 Frame = -3

Query: 141 GSFS-NDTVLELEFQGVKKKVTMLQTWPVRSPRPVASKLAADTPLLTG 1
           G +S  DTVLELEFQGVKKK+TMLQTWPVR+PRPVASKLAADTPLLTG
Sbjct: 81  GQYSLKDTVLELEFQGVKKKITMLQTWPVRTPRPVASKLAADTPLLTG 128


>ref|XP_002451639.1| hypothetical protein SORBIDRAFT_04g005040 [Sorghum bicolor]
           gi|241931470|gb|EES04615.1| hypothetical protein
           SORBIDRAFT_04g005040 [Sorghum bicolor]
          Length = 621

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
 Frame = -3

Query: 141 GSFS-NDTVLELEFQGVKKKVTMLQTWPVRSPRPVASKLAADTPLLTG 1
           G +S  DTVLELEFQG+KKK TMLQTWPVRSPRPVASKLAADTPLLTG
Sbjct: 183 GQYSLQDTVLELEFQGIKKKFTMLQTWPVRSPRPVASKLAADTPLLTG 230


>sp|P49087.1|VATA_MAIZE RecName: Full=V-type proton ATPase catalytic subunit A;
           Short=V-ATPase subunit A; AltName: Full=V-ATPase 69 kDa
           subunit; AltName: Full=Vacuolar proton pump subunit
           alpha gi|1049253|gb|AAA80346.1| vacuolar ATPase 69 kDa
           subunit, partial [Zea mays]
          Length = 561

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 126 DTVLELEFQGVKKKVTMLQTWPVRSPRPVASKLAADTPLLTG 1
           DTVLELEFQG+KKK TMLQTWPVRSPRPVASKLAADTPLLTG
Sbjct: 129 DTVLELEFQGIKKKFTMLQTWPVRSPRPVASKLAADTPLLTG 170


>gb|AFW66327.1| putative ATPase, V1 complex, subunit A protein [Zea mays]
          Length = 851

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 126 DTVLELEFQGVKKKVTMLQTWPVRSPRPVASKLAADTPLLTG 1
           DTVLELEFQG+KKK TMLQTWPVRSPRPVASKLAADTPLLTG
Sbjct: 233 DTVLELEFQGIKKKFTMLQTWPVRSPRPVASKLAADTPLLTG 274


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