BLASTX nr result
ID: Coptis25_contig00004374
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004374
(1474 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera] 662 0.0
ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase... 660 0.0
ref|XP_002512595.1| glutamyl-tRNA synthetase, cytoplasmic, putat... 642 0.0
ref|XP_003536004.1| PREDICTED: probable glutamyl-tRNA synthetase... 639 0.0
ref|XP_003555767.1| PREDICTED: probable glutamyl-tRNA synthetase... 639 0.0
>emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera]
Length = 736
Score = 662 bits (1707), Expect = 0.0
Identities = 336/461 (72%), Positives = 380/461 (82%), Gaps = 8/461 (1%)
Frame = +2
Query: 116 MSLIFAADSPPLSVIATAKIIGHSLIIDSSLPSGALPILQFSSGS---KLHNTDV--LLR 280
+ L F AD PPL VIATAK+ G + DSSL SG+LP SS KL T + LLR
Sbjct: 3 VKLSFPADHPPLYVIATAKVAGIPISEDSSLASGSLPTFLISSNDNEFKLRGTSINALLR 62
Query: 281 YLARVAKLPNFYGKDALEAGQIDEWLEYAHTSFSVGSEFENACTRVDAYLSIRTFFVGYY 460
YL RVA +PNFYG+DA E+ QIDEWLEYA T FS GSEFENAC VD L RTF VGY
Sbjct: 63 YLGRVASIPNFYGQDAFESCQIDEWLEYAPT-FSTGSEFENACCYVDGILLQRTFLVGYS 121
Query: 461 LSVADIAIWSCLAGTGQRWESLRKSKKYPNLVRWFNSLDGEYSVLLNEVTATYVGKRGLG 640
LS+ADIAIWS LAG+GQRWESLRKSKKY NLVRWFNS+ EY+ +LNEVT TYVGKRGLG
Sbjct: 122 LSIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSIYAEYNTVLNEVTGTYVGKRGLG 181
Query: 641 KPTVTKSMEKGQNG-NFSVEN--GESNEKGRASSRPTYEVDLPNAKVGEVCLRFAPEPSG 811
KP K EK Q G N ++N G++NEKG+ASS+ T EVDLP+A+VG V LRFAPEPSG
Sbjct: 182 KPMPAKMKEKEQQGINNHMKNVSGDANEKGKASSKATAEVDLPDAEVGNVRLRFAPEPSG 241
Query: 812 YLHIGHAKAALLNKYFAQRYKGRLILRFDDTNPTKESKKFVDNLQKDIKTLGIQEDAVTH 991
YLHIGH+KAAL+N+YFAQRY+G+LI+RFDDTNP KES +FV+NL KDI+TLGI+ DAVT+
Sbjct: 242 YLHIGHSKAALMNQYFAQRYRGQLIVRFDDTNPAKESNEFVENLLKDIETLGIKYDAVTY 301
Query: 992 TSDYFQKLMEMAENLIQQGKAYVDDTPKEQMQKERMDGIESKCRNNSSEDNMKLWKEMIA 1171
TSDYF +LMEMAENLI GKAYVDDTP+EQMQKERMDGIESKCRNNS ++NM+LWKEMIA
Sbjct: 302 TSDYFPQLMEMAENLICNGKAYVDDTPREQMQKERMDGIESKCRNNSPQENMELWKEMIA 361
Query: 1172 GSERGIQCCVRGKLDMQDQNKTLRDPVYYRYNADPHHRTGSMYKVYPTYDFACPFVDAIE 1351
GSERG+ CC+RGKLDMQD NK+LRDPVYYR N PHHR GS YK+YPTYDFACPFVDA E
Sbjct: 362 GSERGLMCCLRGKLDMQDPNKSLRDPVYYRCNPLPHHRIGSKYKLYPTYDFACPFVDAKE 421
Query: 1352 GITHALRSSEYHDRNAQYQRILEDMGLRKVQLYEFSRLNMV 1474
GITHALRSSEYHDRNAQY RI EDMG++KV +YEFSRLNMV
Sbjct: 422 GITHALRSSEYHDRNAQYHRIQEDMGVKKVHIYEFSRLNMV 462
>ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
isoform 1 [Vitis vinifera]
Length = 736
Score = 660 bits (1703), Expect = 0.0
Identities = 336/461 (72%), Positives = 379/461 (82%), Gaps = 8/461 (1%)
Frame = +2
Query: 116 MSLIFAADSPPLSVIATAKIIGHSLIIDSSLPSGALPILQFSSGS---KLHNTDV--LLR 280
+ L F AD PPL VIATAK+ G + DSSL SG+LP SS KL T + LLR
Sbjct: 3 VKLSFPADHPPLYVIATAKVAGIPISEDSSLASGSLPTFLISSNDNEFKLRGTSINALLR 62
Query: 281 YLARVAKLPNFYGKDALEAGQIDEWLEYAHTSFSVGSEFENACTRVDAYLSIRTFFVGYY 460
YL RVA +PNFYG+DA E+ QIDEWLEYA T FS GSEFENAC VD L RTF VGY
Sbjct: 63 YLGRVASIPNFYGQDAFESCQIDEWLEYAPT-FSTGSEFENACCYVDGILLQRTFLVGYS 121
Query: 461 LSVADIAIWSCLAGTGQRWESLRKSKKYPNLVRWFNSLDGEYSVLLNEVTATYVGKRGLG 640
LS+ADIAIWS LAG+GQRWESLRKSKKY NLVRWFNS+ EY+ +LNEVT TYVGKRGLG
Sbjct: 122 LSIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSIYAEYNTVLNEVTGTYVGKRGLG 181
Query: 641 KPTVTKSMEKGQNG-NFSVEN--GESNEKGRASSRPTYEVDLPNAKVGEVCLRFAPEPSG 811
KP K EK Q G N ++N G++NEKG+ASS+ T EVDLP+A+VG V LRFAPEPSG
Sbjct: 182 KPMPAKMKEKEQQGINNHMKNVSGDANEKGKASSKATAEVDLPDAEVGNVRLRFAPEPSG 241
Query: 812 YLHIGHAKAALLNKYFAQRYKGRLILRFDDTNPTKESKKFVDNLQKDIKTLGIQEDAVTH 991
YLHIGH+KAAL+N+YFAQRY+G+LI+RFDDTNP KES +FV+NL KDI+TLGI+ DAVT+
Sbjct: 242 YLHIGHSKAALMNQYFAQRYQGQLIVRFDDTNPAKESNEFVENLLKDIETLGIKYDAVTY 301
Query: 992 TSDYFQKLMEMAENLIQQGKAYVDDTPKEQMQKERMDGIESKCRNNSSEDNMKLWKEMIA 1171
TSDYF +LMEMAENLI GKAYVDDTP+EQMQKERMDGIESKCRNNS + NM+LWKEMIA
Sbjct: 302 TSDYFPQLMEMAENLICNGKAYVDDTPREQMQKERMDGIESKCRNNSPQKNMELWKEMIA 361
Query: 1172 GSERGIQCCVRGKLDMQDQNKTLRDPVYYRYNADPHHRTGSMYKVYPTYDFACPFVDAIE 1351
GSERG+ CC+RGKLDMQD NK+LRDPVYYR N PHHR GS YK+YPTYDFACPFVDA E
Sbjct: 362 GSERGLMCCLRGKLDMQDPNKSLRDPVYYRCNPLPHHRIGSKYKLYPTYDFACPFVDAKE 421
Query: 1352 GITHALRSSEYHDRNAQYQRILEDMGLRKVQLYEFSRLNMV 1474
GITHALRSSEYHDRNAQY RI EDMG++KV +YEFSRLNMV
Sbjct: 422 GITHALRSSEYHDRNAQYHRIQEDMGVKKVHIYEFSRLNMV 462
>ref|XP_002512595.1| glutamyl-tRNA synthetase, cytoplasmic, putative [Ricinus communis]
gi|223548556|gb|EEF50047.1| glutamyl-tRNA synthetase,
cytoplasmic, putative [Ricinus communis]
Length = 728
Score = 642 bits (1656), Expect = 0.0
Identities = 315/450 (70%), Positives = 370/450 (82%), Gaps = 1/450 (0%)
Frame = +2
Query: 128 FAADSPPLSVIATAKIIGHSLIIDSSLP-SGALPILQFSSGSKLHNTDVLLRYLARVAKL 304
FAADSPPLSVI+ AK+ L + L S +LP + FS G+KL T VLLRY+ R+A L
Sbjct: 8 FAADSPPLSVISAAKVAAVCLPTPTILTDSSSLPTIVFSDGTKLRGTFVLLRYIGRIASL 67
Query: 305 PNFYGKDALEAGQIDEWLEYAHTSFSVGSEFENACTRVDAYLSIRTFFVGYYLSVADIAI 484
PNFYG DA ++ QIDEWL+Y+ + S GSEFE+ACT +D+YL RTF V Y LS+AD+AI
Sbjct: 68 PNFYGHDACQSSQIDEWLDYS-SILSSGSEFESACTYIDSYLEKRTFLVAYCLSIADMAI 126
Query: 485 WSCLAGTGQRWESLRKSKKYPNLVRWFNSLDGEYSVLLNEVTATYVGKRGLGKPTVTKSM 664
WS LAG+GQRWESLRKSKKY NLVRWFNS+ EYS L EVT+TYVGKRG GKP KS
Sbjct: 127 WSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYSDALIEVTSTYVGKRGAGKPVTAKSK 186
Query: 665 EKGQNGNFSVENGESNEKGRASSRPTYEVDLPNAKVGEVCLRFAPEPSGYLHIGHAKAAL 844
E+ NG+ +EKG+A S+ T EVDLP+A++G+VCLRFAPEPSGYLHIGHAKAAL
Sbjct: 187 EQ------QFVNGDISEKGKAGSK-TAEVDLPDAEIGKVCLRFAPEPSGYLHIGHAKAAL 239
Query: 845 LNKYFAQRYKGRLILRFDDTNPTKESKKFVDNLQKDIKTLGIQEDAVTHTSDYFQKLMEM 1024
LN+YFAQRY+G LILRFDDTNP KES +FV+NL KD++TLG++ VTHTSDYF +LM+
Sbjct: 240 LNQYFAQRYQGELILRFDDTNPAKESSEFVENLLKDVETLGVKYKKVTHTSDYFDELMKK 299
Query: 1025 AENLIQQGKAYVDDTPKEQMQKERMDGIESKCRNNSSEDNMKLWKEMIAGSERGIQCCVR 1204
AE LI+QGKAY+DDTP+EQMQKERMDGIESKCRNN+ E+N+KLWKEMI GSERG+QCC+R
Sbjct: 300 AEELIRQGKAYIDDTPREQMQKERMDGIESKCRNNNVEENLKLWKEMIVGSERGLQCCLR 359
Query: 1205 GKLDMQDQNKTLRDPVYYRYNADPHHRTGSMYKVYPTYDFACPFVDAIEGITHALRSSEY 1384
GKLDMQD NK+LRDPVYYR N PHHR GS Y +YPTYDFACP+VDA+EGITHALRSSEY
Sbjct: 360 GKLDMQDPNKSLRDPVYYRCNPVPHHRIGSKYNIYPTYDFACPYVDALEGITHALRSSEY 419
Query: 1385 HDRNAQYQRILEDMGLRKVQLYEFSRLNMV 1474
HDRNAQY RI ED+G+RKV +YEFSRLNMV
Sbjct: 420 HDRNAQYHRIQEDLGVRKVHIYEFSRLNMV 449
>ref|XP_003536004.1| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
[Glycine max]
Length = 733
Score = 639 bits (1648), Expect = 0.0
Identities = 313/450 (69%), Positives = 367/450 (81%), Gaps = 1/450 (0%)
Frame = +2
Query: 128 FAADSPPLSVIATAKIIGHSLIIDSSLPSGALPILQFSSGSKLHNTDVLLRYLARVAKLP 307
FA SPPL VIA AK+ G S ID+SL + P FS G KLH LLRY+ RVA LP
Sbjct: 8 FAPSSPPLPVIAAAKLAGISPSIDTSLSPDSPPAFIFSDGLKLHGAYALLRYIGRVASLP 67
Query: 308 NFYGKDALEAGQIDEWLEYAHTSFSVGSEFENACTRVDAYLSIRTFFVGYYLSVADIAIW 487
NFYG++ALE+ QIDEWL+YA S G FENAC +D YL TF VGY LS+AD+AIW
Sbjct: 68 NFYGQNALESSQIDEWLDYAPI-LSSGPAFENACKYIDEYLEKCTFLVGYSLSIADLAIW 126
Query: 488 SCLAGTGQRWESLRKSKKYPNLVRWFNSLDGEYSVLLNEVTATYVGKRGLGKPTVTKSME 667
+ LAG+G+RWESLRKSKKYPNL RWFNS+ E+ +LNEVT+ Y GK+GLG+PT TKS +
Sbjct: 127 AGLAGSGKRWESLRKSKKYPNLARWFNSIVAEHGTVLNEVTSVYAGKKGLGEPTATKSKD 186
Query: 668 KGQNGN-FSVENGESNEKGRASSRPTYEVDLPNAKVGEVCLRFAPEPSGYLHIGHAKAAL 844
+ N + NG+ +E + S+P+ E+DLP+A+VG+V LRFAPEPSGYLHIGH+KAAL
Sbjct: 187 QSVNTDKVKKVNGDVSENNKGGSKPSAEIDLPDAEVGKVRLRFAPEPSGYLHIGHSKAAL 246
Query: 845 LNKYFAQRYKGRLILRFDDTNPTKESKKFVDNLQKDIKTLGIQEDAVTHTSDYFQKLMEM 1024
LNKYFA+RYKG++I+RFDDTNP KES +FVDNL KDI TLGI+ + +T+TSDYF +LMEM
Sbjct: 247 LNKYFAERYKGQVIVRFDDTNPAKESNEFVDNLIKDIDTLGIKYEQITYTSDYFPELMEM 306
Query: 1025 AENLIQQGKAYVDDTPKEQMQKERMDGIESKCRNNSSEDNMKLWKEMIAGSERGIQCCVR 1204
AE LI+QGKAYVDDTP+EQMQKERMDGI+SKCRNNS E+N+KLWKEMIAG+ERG+QCCVR
Sbjct: 307 AEKLIRQGKAYVDDTPREQMQKERMDGIDSKCRNNSVEENLKLWKEMIAGTERGLQCCVR 366
Query: 1205 GKLDMQDQNKTLRDPVYYRYNADPHHRTGSMYKVYPTYDFACPFVDAIEGITHALRSSEY 1384
GKLDMQD NK+LRDPVYYR N PHHR GS YKVYPTYDFACP+VD+IEGITHALRSSEY
Sbjct: 367 GKLDMQDPNKSLRDPVYYRCNPMPHHRIGSKYKVYPTYDFACPYVDSIEGITHALRSSEY 426
Query: 1385 HDRNAQYQRILEDMGLRKVQLYEFSRLNMV 1474
HDRNAQY I EDMGLRKV +YEFSRLNMV
Sbjct: 427 HDRNAQYYWIQEDMGLRKVLIYEFSRLNMV 456
>ref|XP_003555767.1| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
[Glycine max]
Length = 732
Score = 639 bits (1647), Expect = 0.0
Identities = 312/450 (69%), Positives = 366/450 (81%), Gaps = 1/450 (0%)
Frame = +2
Query: 128 FAADSPPLSVIATAKIIGHSLIIDSSLPSGALPILQFSSGSKLHNTDVLLRYLARVAKLP 307
FA SPPLSVIA AK+ G S ID++L + P FS G KLH LLRY+ RVA LP
Sbjct: 8 FAPSSPPLSVIAAAKLAGISPTIDTALSPDSPPSFIFSDGLKLHGPYALLRYIGRVASLP 67
Query: 308 NFYGKDALEAGQIDEWLEYAHTSFSVGSEFENACTRVDAYLSIRTFFVGYYLSVADIAIW 487
NFYG++ E+ QIDEWL+YA S+G FENAC +D YL RTF VGY LS+AD+AIW
Sbjct: 68 NFYGQNPFESSQIDEWLDYAPI-LSLGPAFENACKYIDEYLEKRTFLVGYSLSIADLAIW 126
Query: 488 SCLAGTGQRWESLRKSKKYPNLVRWFNSLDGEYSVLLNEVTATYVGKRGLGKPTVTKSME 667
+ LAG+G+RWESLRKSKKYPNL RWFNS+ E+ LNEVT+ Y GK+GLG+PT TKS E
Sbjct: 127 AGLAGSGKRWESLRKSKKYPNLARWFNSIVEEHGTALNEVTSVYAGKKGLGEPTATKSKE 186
Query: 668 KGQNGN-FSVENGESNEKGRASSRPTYEVDLPNAKVGEVCLRFAPEPSGYLHIGHAKAAL 844
+ N + NG+ +E + S+P+ E+DLP+A+VG+V LRFAPEPSGYLHIGH+KAAL
Sbjct: 187 QSVNTDKVKKVNGDVSENNKGGSKPSAEIDLPDAEVGKVRLRFAPEPSGYLHIGHSKAAL 246
Query: 845 LNKYFAQRYKGRLILRFDDTNPTKESKKFVDNLQKDIKTLGIQEDAVTHTSDYFQKLMEM 1024
LNKYFA+RY+G++I+RFDDTNP KES +FVDNL KDI TLGI+ + +T+TSDYF +LMEM
Sbjct: 247 LNKYFAERYQGQVIVRFDDTNPAKESNEFVDNLIKDIDTLGIKYEQITYTSDYFPELMEM 306
Query: 1025 AENLIQQGKAYVDDTPKEQMQKERMDGIESKCRNNSSEDNMKLWKEMIAGSERGIQCCVR 1204
AE LI++GK YVDDTP+EQMQKERMDGIESKCRNN E+N+KLWKEMIAG+ERG+QCCVR
Sbjct: 307 AEKLIREGKTYVDDTPREQMQKERMDGIESKCRNNIVEENLKLWKEMIAGTERGLQCCVR 366
Query: 1205 GKLDMQDQNKTLRDPVYYRYNADPHHRTGSMYKVYPTYDFACPFVDAIEGITHALRSSEY 1384
GKLDMQD NK+LRDPVYYR N PHHR GS YKVYPTYDFACP+VDAIEGITHALRSSEY
Sbjct: 367 GKLDMQDPNKSLRDPVYYRCNPMPHHRIGSKYKVYPTYDFACPYVDAIEGITHALRSSEY 426
Query: 1385 HDRNAQYQRILEDMGLRKVQLYEFSRLNMV 1474
HDRNAQY RI EDMGLRKV +YEFSRLNMV
Sbjct: 427 HDRNAQYYRIQEDMGLRKVLIYEFSRLNMV 456