BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004371
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...    61   1e-07
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...    59   2e-07
ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloproteas...    57   4e-07
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia...    55   5e-06

>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 925

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = +2

Query: 146 LTRWTGAKXXXXXXXXXXXXXRRGHGSILQSDVDDVVDRLTVGPKRVGIE 295
           L  WTGAK             R+GH SI+QSD+DD VDRLTVGPKRVGI+
Sbjct: 624 LPGWTGAKLAQLVQEAALVAVRQGHASIIQSDIDDAVDRLTVGPKRVGID 673


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/50 (60%), Positives = 33/50 (66%)
 Frame = +2

Query: 146 LTRWTGAKXXXXXXXXXXXXXRRGHGSILQSDVDDVVDRLTVGPKRVGIE 295
           L  WTGAK             R+GH +ILQSD+DD VDRLTVGPKRVGIE
Sbjct: 628 LPGWTGAKLAQLVQEAALVAVRQGHAAILQSDMDDAVDRLTVGPKRVGIE 677


>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
           gi|296090151|emb|CBI39970.3| unnamed protein product
           [Vitis vinifera]
          Length = 907

 Score = 58.9 bits (141), Expect(2) = 2e-07
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = +2

Query: 146 LTRWTGAKXXXXXXXXXXXXXRRGHGSILQSDVDDVVDRLTVGPKRVGIE 295
           L  WTGA+             R+GH +ILQSDVD+ VDRLTVGPKRVGIE
Sbjct: 604 LPGWTGARLAQLLQEAALVAVRKGHEAILQSDVDEAVDRLTVGPKRVGIE 653



 Score = 21.2 bits (43), Expect(2) = 2e-07
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 123 NMSSYVQNLPG 155
           ++S+Y QNLPG
Sbjct: 596 DLSTYAQNLPG 606


>ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2,
           chloroplastic-like [Glycine max]
          Length = 925

 Score = 56.6 bits (135), Expect(2) = 4e-07
 Identities = 28/50 (56%), Positives = 32/50 (64%)
 Frame = +2

Query: 146 LTRWTGAKXXXXXXXXXXXXXRRGHGSILQSDVDDVVDRLTVGPKRVGIE 295
           L  W+GA+             R+ H SILQSD+DD VDRLTVGPKRVGIE
Sbjct: 623 LPGWSGARLAQLVQEAALVAVRKQHNSILQSDMDDAVDRLTVGPKRVGIE 672



 Score = 22.3 bits (46), Expect(2) = 4e-07
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 123 NMSSYVQNLPG 155
           ++SSY QNLPG
Sbjct: 615 DLSSYAQNLPG 625


>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
           gi|2262118|gb|AAB63626.1| cell division protein isolog
           [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
           division protein-like [Arabidopsis thaliana]
           gi|7269243|emb|CAB81312.1| cell division protein-like
           [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
           extracellular protease [Arabidopsis thaliana]
          Length = 946

 Score = 54.7 bits (130), Expect(2) = 5e-06
 Identities = 26/52 (50%), Positives = 32/52 (61%)
 Frame = +2

Query: 140 AELTRWTGAKXXXXXXXXXXXXXRRGHGSILQSDVDDVVDRLTVGPKRVGIE 295
           + L  W+GAK             R+ H SILQSD+DD VDRLTVGP R+G+E
Sbjct: 637 SNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLE 688



 Score = 20.4 bits (41), Expect(2) = 5e-06
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 123 NMSSYVQNLPG 155
           ++SSY  NLPG
Sbjct: 631 DLSSYASNLPG 641