BLASTX nr result

ID: Coptis25_contig00004363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004363
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282536.1| PREDICTED: BTB/POZ and MATH domain-containin...   192   3e-47
ref|XP_002311185.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_002524218.1| Speckle-type POZ protein, putative [Ricinus ...   189   2e-46
ref|XP_002316266.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_003552772.1| PREDICTED: BTB/POZ and MATH domain-containin...   182   2e-44

>ref|XP_002282536.1| PREDICTED: BTB/POZ and MATH domain-containing protein 3-like [Vitis
           vinifera]
          Length = 406

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/110 (81%), Positives = 98/110 (89%)
 Frame = +3

Query: 51  MNETTGKQESSCSKSINETINGSHEYKIKGYSLAKGMGTGKHISSDVFTVGGYDWAIYFY 230
           +N     +  SCSKSINET+NGSH + IKGYSLAKGMG GK+ISSD FTVGGYDWAIYFY
Sbjct: 2   VNSKADIERDSCSKSINETVNGSHHFLIKGYSLAKGMGAGKYISSDTFTVGGYDWAIYFY 61

Query: 231 PDGKNPEDSSMYVSVFIALASDGTDVRALFELTLMDQSGKGKHKVHSHFD 380
           PDGKN ED+SMYVSVFIALAS+GTDVRALFELTL+DQSGKGKHKVHSHFD
Sbjct: 62  PDGKNAEDNSMYVSVFIALASEGTDVRALFELTLLDQSGKGKHKVHSHFD 111


>ref|XP_002311185.1| predicted protein [Populus trichocarpa] gi|222851005|gb|EEE88552.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  190 bits (483), Expect = 9e-47
 Identities = 89/102 (87%), Positives = 96/102 (94%)
 Frame = +3

Query: 75  ESSCSKSINETINGSHEYKIKGYSLAKGMGTGKHISSDVFTVGGYDWAIYFYPDGKNPED 254
           + SCSKSINET+NGSH++ IKGYSLAKGMG G+ I SDVF VGGYDWAIYFYPDGKNPED
Sbjct: 10  KESCSKSINETVNGSHQFTIKGYSLAKGMGAGRCIPSDVFNVGGYDWAIYFYPDGKNPED 69

Query: 255 SSMYVSVFIALASDGTDVRALFELTLMDQSGKGKHKVHSHFD 380
           SSMYVSVFIALAS+GTDVRALFELTL+DQSGKGKHKVHSHFD
Sbjct: 70  SSMYVSVFIALASEGTDVRALFELTLVDQSGKGKHKVHSHFD 111


>ref|XP_002524218.1| Speckle-type POZ protein, putative [Ricinus communis]
           gi|223536495|gb|EEF38142.1| Speckle-type POZ protein,
           putative [Ricinus communis]
          Length = 408

 Score =  189 bits (481), Expect = 2e-46
 Identities = 87/102 (85%), Positives = 96/102 (94%)
 Frame = +3

Query: 75  ESSCSKSINETINGSHEYKIKGYSLAKGMGTGKHISSDVFTVGGYDWAIYFYPDGKNPED 254
           + SCS SINET+NGSH++ IKGYSLAKGMG GK I+SD+FTVGGYDWAIYFYPDGKNPED
Sbjct: 10  KESCSMSINETVNGSHQFSIKGYSLAKGMGAGKCIASDIFTVGGYDWAIYFYPDGKNPED 69

Query: 255 SSMYVSVFIALASDGTDVRALFELTLMDQSGKGKHKVHSHFD 380
           SSMYVSVF+ALAS+GTDVRALFELTL+DQSG GKHKVHSHFD
Sbjct: 70  SSMYVSVFVALASEGTDVRALFELTLVDQSGNGKHKVHSHFD 111


>ref|XP_002316266.1| predicted protein [Populus trichocarpa] gi|222865306|gb|EEF02437.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/102 (86%), Positives = 95/102 (93%)
 Frame = +3

Query: 75  ESSCSKSINETINGSHEYKIKGYSLAKGMGTGKHISSDVFTVGGYDWAIYFYPDGKNPED 254
           + SCSKSINET+NGSH++ IKGYSLAKGMG GK I SDVF VGGYDW +YFYPDGKNPED
Sbjct: 10  KESCSKSINETVNGSHQFTIKGYSLAKGMGAGKCIPSDVFNVGGYDWGVYFYPDGKNPED 69

Query: 255 SSMYVSVFIALASDGTDVRALFELTLMDQSGKGKHKVHSHFD 380
           SSMYVSVFIALAS+GTDVRALFELTL+DQSGKGKHKVHSHFD
Sbjct: 70  SSMYVSVFIALASEGTDVRALFELTLVDQSGKGKHKVHSHFD 111


>ref|XP_003552772.1| PREDICTED: BTB/POZ and MATH domain-containing protein 3-like
           [Glycine max]
          Length = 414

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/101 (84%), Positives = 94/101 (93%)
 Frame = +3

Query: 78  SSCSKSINETINGSHEYKIKGYSLAKGMGTGKHISSDVFTVGGYDWAIYFYPDGKNPEDS 257
           SSCS+SI+ET+NGSH++ IKGYSLAKGMG GK+I SD FTVGGYDWAIYFYPDGKNPED+
Sbjct: 19  SSCSRSISETVNGSHQFTIKGYSLAKGMGAGKYIMSDTFTVGGYDWAIYFYPDGKNPEDN 78

Query: 258 SMYVSVFIALASDGTDVRALFELTLMDQSGKGKHKVHSHFD 380
           SMYVSVFIALASDGTDVRALF+LTL+DQS KG  KVHSHFD
Sbjct: 79  SMYVSVFIALASDGTDVRALFKLTLVDQSEKGNDKVHSHFD 119


Top