BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004338
         (2292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-li...   513   e-143
emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]   484   e-134
ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER is...   471   e-130
ref|XP_003529728.1| PREDICTED: zinc finger protein NUTCRACKER-li...   413   e-113
ref|XP_002527396.1| nucleic acid binding protein, putative [Rici...   405   e-110

>ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 509

 Score =  513 bits (1322), Expect = e-143
 Identities = 298/535 (55%), Positives = 339/535 (63%), Gaps = 12/535 (2%)
 Frame = +3

Query: 498  VMDENMSSNLTCTSDEPLASSGSRADAGTMCRQQPLASPHQTQTSVVKRKRNLPGNPDPT 677
            ++DENMS NLT  S E  ASS ++A A                    K+KR+LPGNPDP 
Sbjct: 6    MVDENMS-NLTSASGEASASSANQAPAAA------------------KKKRSLPGNPDPN 46

Query: 678  AEVIALSPKTLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVC 857
            AEV+ALSPKTL ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+KE+RK+VYVC
Sbjct: 47   AEVVALSPKTLQATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYVC 106

Query: 858  PEPSCVHHDPSRALGDLTGIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREY 1037
            PEP+CVHHDPSRALGDLTGIKKHF RKHGE           YAVQSDWKAHSK CGTREY
Sbjct: 107  PEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREY 166

Query: 1038 KCDCGTLFSRRDSFITHRAFCDALAEESARAVTVNPLISTQSGNSAPHMNLQAQFSIHDF 1217
            +CDCGTLFSRRDSFITHRAFCDALAEESARA+T NPL+S+Q G+S+ H+NLQ Q   H  
Sbjct: 167  RCDCGTLFSRRDSFITHRAFCDALAEESARAITGNPLLSSQPGSSSSHLNLQPQLHSHGL 226

Query: 1218 QGV-QIKR--XXXXXXXXXXXXXXWLASAPTLGGGPGPPHIDLSQTIFQ-RFEHEFSQNQ 1385
            Q V  +KR                WLA  P L  GPGPP IDLS ++F    +H      
Sbjct: 227  QAVLSLKREQEQHHSFNLKPDIPPWLACPPVLEAGPGPPSIDLSSSLFSASLDHPLIY-- 284

Query: 1386 QTSSTHENSNLXXXXXXXXXXXXXXXHMSATALLQKAAQ-XXXXXXXXXXXXLIRPQNSH 1562
                 HEN N                HMSATALLQ+AAQ             ++RP  +H
Sbjct: 285  -----HENPN--PNSTLPSFHHTASPHMSATALLQQAAQMGVTMSKPSPSPPMLRPHQAH 337

Query: 1563 MS-ANTGNPTAATA---CGFGLGLSSHEELESGLMHTLTAFGNKTSTIPSGLMGHL-TGA 1727
            MS AN G  + A A    G  LGLSS +E+ SG +H L +FG+K + + SG M H+ TGA
Sbjct: 338  MSAANAGFSSTAVATSTAGSDLGLSSRDEMASGFIHGLASFGSK-AAVTSGFMEHVATGA 396

Query: 1728 STSPRASLL--QEMSCLTSDSGFDGSSFEEAFGGMLDTKSERNPTQNPKTTERTTKLPCR 1901
                 A  L    MS L+S SGF G SFEEAF GML+ K E N  +  KT   T     R
Sbjct: 397  GAGAAAPSLFHDMMSSLSSASGFGGPSFEEAFNGMLNPKRENNLQEITKTA-MTKSHFSR 455

Query: 1902 NXXXXXXXXXXLTRDFLGLRAFPRRDFLNIAGLDQRIGSAVPYEQQNQNQKPWQG 2066
            +          LTRDFLGLRAF  RDFLNI GLDQ + SA PYEQQNQNQ PWQG
Sbjct: 456  SDHEGGGGNDGLTRDFLGLRAFSHRDFLNIPGLDQ-MNSASPYEQQNQNQTPWQG 509


>emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]
          Length = 532

 Score =  484 bits (1245), Expect = e-134
 Identities = 281/549 (51%), Positives = 332/549 (60%), Gaps = 33/549 (6%)
 Frame = +3

Query: 519  SNLTCTSDEPLASSGSRADAGTMC-RQQPLASPHQTQTSV-----VKRKRNLPGNPDPTA 680
            SNLT  S E   SSG+RA+   M  +QQ  A P+Q Q  V     VK+KRNLPGNPDP A
Sbjct: 2    SNLTSASGEASVSSGNRAETAPMYPQQQYFAPPNQAQAQVQAQPSVKKKRNLPGNPDPDA 61

Query: 681  EVIALSPKTLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCP 860
            EVIALSPKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCP
Sbjct: 62   EVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCP 121

Query: 861  EPSCVHHDPSRALGDLTGIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYK 1040
            E SCVHHDPSRALGDLTGIKKHF RKHGE           YAVQSDWKAHSKTCGTREY+
Sbjct: 122  EASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYR 181

Query: 1041 CDCGTLFSRRDSFITHRAFCDALAEESARAVTVNP-LISTQS----GNSAPH----MNLQ 1193
            CDCGTLFSRRDSFITHRAFCDALAEESARA+T NP L+S+Q+     +S PH    M+LQ
Sbjct: 182  CDCGTLFSRRDSFITHRAFCDALAEESARAITGNPVLLSSQAAAGPSSSTPHSHSQMSLQ 241

Query: 1194 AQ---FSIHDFQGVQIKRXXXXXXXXXXXXXXWLASAPTLGGGPGPPHIDLSQTIFQRFE 1364
             Q    S HDF   Q+K+              WL+S+ +L                 R +
Sbjct: 242  QQQQFNSNHDFHAFQMKKEQQSFSIRSEVVPPWLSSSSSL--------------FPTRLD 287

Query: 1365 HEFSQNQQTSSTHE----NSNLXXXXXXXXXXXXXXXHMSATALLQKAAQ------XXXX 1514
            H+F+Q  Q  + H+    N N                HMSATALLQKAAQ          
Sbjct: 288  HDFTQTTQDLALHDIQNPNPNPSLGPTLPPYHPTLSPHMSATALLQKAAQMGATMSKTTG 347

Query: 1515 XXXXXXXXLIRPQNSHMSANTGNPTAATACGFGLGLSSHEELESGLMHTLTAFGNKTSTI 1694
                    +IRP  +H+SA   + +     GFGL LSS EE+  G +  L  FGNK + +
Sbjct: 348  GSGASPPAMIRPHQAHVSA---DHSCNNTTGFGLNLSSREEMGGGFVQGLAPFGNKAAAV 404

Query: 1695 PSGLMGHLT-----GASTSPRASLLQEMSCLTSDSGFDGSSFEEAFGGMLDTKSERNPTQ 1859
            PS            G + SP   L   M+ L+S +GFD SSFE+AFGGML+++   N   
Sbjct: 405  PSAAAAAAAATGPGGGAPSPSLLLQDMMTSLSSATGFDSSSFEDAFGGMLNSRKNGNNLH 464

Query: 1860 NPKTTERTTKLPCRNXXXXXXXXXXLTRDFLGLRAFPRRDFLNIAGLDQRIGSAVPYEQQ 2039
                ++ TT     +          LTRDFLGLRA    D L+IAGL   + ++ P++ Q
Sbjct: 465  QTLPSKSTTTTATTHHSSGGAGNDGLTRDFLGLRALSHSDILSIAGLGTCMNTS-PHDHQ 523

Query: 2040 NQNQKPWQG 2066
            NQ QKPWQG
Sbjct: 524  NQTQKPWQG 532


>ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER isoform 2 [Vitis vinifera]
          Length = 509

 Score =  471 bits (1212), Expect = e-130
 Identities = 274/543 (50%), Positives = 323/543 (59%), Gaps = 27/543 (4%)
 Frame = +3

Query: 519  SNLTCTSDEPLASSGSRADAGTMCRQQPLASPHQTQTSVVKRKRNLPGNPDPTAEVIALS 698
            SNLT  S E   SSG+RA+                 T  VK+KRNLPGNPDP AEVIALS
Sbjct: 2    SNLTSASGEASVSSGNRAE-----------------TPSVKKKRNLPGNPDPDAEVIALS 44

Query: 699  PKTLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEPSCVH 878
            PKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCPE SCVH
Sbjct: 45   PKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEASCVH 104

Query: 879  HDPSRALGDLTGIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTL 1058
            HDPSRALGDLTGIKKHF RKHGE           YAVQSDWKAHSKTCGTREY+CDCGTL
Sbjct: 105  HDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTL 164

Query: 1059 FSRRDSFITHRAFCDALAEESARAVTVNP-LISTQS----GNSAPH----MNLQAQ---F 1202
            FSRRDSFITHRAFCDALAEESARA+T NP L+S+Q+     +S PH    M+LQ Q    
Sbjct: 165  FSRRDSFITHRAFCDALAEESARAITGNPVLLSSQAAAGPSSSTPHSHSQMSLQQQQQFN 224

Query: 1203 SIHDFQGVQIKRXXXXXXXXXXXXXXWLASAPTLGGGPGPPHIDLSQTIFQRFEHEFSQN 1382
            S HDF   Q+K+              WL+S+ +L                 R +H+F+Q 
Sbjct: 225  SNHDFHAFQMKKEQQSFSIRSEVVPPWLSSSSSL--------------FPTRLDHDFTQT 270

Query: 1383 QQTSSTHE----NSNLXXXXXXXXXXXXXXXHMSATALLQKAAQ------XXXXXXXXXX 1532
             Q  + H+    N N                HMSATALLQKAAQ                
Sbjct: 271  TQDLALHDIQNPNPNPSLGPTLPPYHPTLSPHMSATALLQKAAQMGATMSKTTGGSGASP 330

Query: 1533 XXLIRPQNSHMSANTGNPTAATACGFGLGLSSHEELESGLMHTLTAFGNKTSTIPSGLMG 1712
              +IRP  +H+SA   + +     GFGL LSS EE+  G +  L  FGNK + +PS    
Sbjct: 331  PAMIRPHQAHVSA---DHSCNNTTGFGLNLSSREEMGGGFVQGLAPFGNKAAAVPSAAAA 387

Query: 1713 HLT-----GASTSPRASLLQEMSCLTSDSGFDGSSFEEAFGGMLDTKSERNPTQNPKTTE 1877
                    G + SP   L   M+ L+S +GFD SSFE+AFGGML+++   N       ++
Sbjct: 388  AAAATGPGGGAPSPSLLLQDMMTSLSSATGFDSSSFEDAFGGMLNSRKNGNNLHQTLPSK 447

Query: 1878 RTTKLPCRNXXXXXXXXXXLTRDFLGLRAFPRRDFLNIAGLDQRIGSAVPYEQQNQNQKP 2057
             TT     +          LTRDFLGLRA    D L+IAGL   + ++ P++ QNQ QKP
Sbjct: 448  STTTTATTHHSSGGAGNDGLTRDFLGLRALSHSDILSIAGLGTCMNTS-PHDHQNQTQKP 506

Query: 2058 WQG 2066
            WQG
Sbjct: 507  WQG 509


>ref|XP_003529728.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]
          Length = 498

 Score =  413 bits (1062), Expect = e-113
 Identities = 257/538 (47%), Positives = 306/538 (56%), Gaps = 11/538 (2%)
 Frame = +3

Query: 486  QPHSVMDENMSSNLTCTSDEPLASSGSRADAGTMCRQQPLASPHQTQTSVVKRKRNLPGN 665
            Q   +++ENMS NLT  S E  ASSG+R + GT        +P  TQ    K+KRNLPGN
Sbjct: 13   QQQQIVEENMS-NLTSASGEASASSGNRTEIGTS-----YMAPPPTQIQPPKKKRNLPGN 66

Query: 666  PDPTAEVIALSPKTLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKR 845
            PDP AEVIALSPK+L+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+
Sbjct: 67   PDPDAEVIALSPKSLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKK 126

Query: 846  VYVCPEPSCVHHDPSRALGDLTGIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCG 1025
            VYVCPEPSCVHHDPSRALGDLTGIKKHF RKHGE           YAVQSDWKAHSKTCG
Sbjct: 127  VYVCPEPSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCG 186

Query: 1026 TREYKCDCGTLFSRRDSFITHRAFCDALAEESARAVTVNPLI-STQSGNSAPHMN-LQAQ 1199
            TREY+CDCGTLFSRRDSFITHRAFCDALAEESARA+  NPL+   Q  +S+ HM+ LQ Q
Sbjct: 187  TREYRCDCGTLFSRRDSFITHRAFCDALAEESARAI-ANPLLPPQQQQSSSSHMSTLQTQ 245

Query: 1200 FSIHDFQGVQIKRXXXXXXXXXXXXXXWLASAPTLGGGPGPPHIDLSQTIFQRFEHEFSQ 1379
            F+  +     +K+              WL    T+       H+  S +I     H+   
Sbjct: 246  FNPQNLHAFPLKK----------EMPPWLGPPATV---VVDHHLSSSSSIMFSPPHQ--- 289

Query: 1380 NQQTSSTHENSNLXXXXXXXXXXXXXXXHMSATALLQKAAQXXXXXXXXXXXXLIRPQNS 1559
                    EN N                HMSATALLQKAAQ                ++ 
Sbjct: 290  --------ENPNPSLGPTLAAYQTVPNPHMSATALLQKAAQ----------MGATMSRSG 331

Query: 1560 HMSANTGNPTAATACGFGLGLSSHEELESGLMHTLTAFGNKTSTIPSGLMGH-------- 1715
               A TG    A    FGL LSS E+  +    T T   N  +    GL+          
Sbjct: 332  STPAMTGPHHHAHVSHFGLNLSSREDTTTTTPSTTTTNANTATVFSHGLLSSSPLGNKAA 391

Query: 1716 LTGASTSPRASLLQE-MSCLTSDSGFDGSSFEEAFGGMLDTKSERNPTQNPKTTERTTKL 1892
               A +S   SLL + ++  +S S F+G+ FE+AF        + +      T  +T+  
Sbjct: 392  AAAAVSSSAPSLLHDVINSFSSPSAFEGTPFEDAFIQSSKKLDDDHNLYLHDTFSKTSGA 451

Query: 1893 PCRNXXXXXXXXXXLTRDFLGLRAFPRRDFLNIAGLDQRIGSAVPYEQQNQNQKPWQG 2066
               N          LTRDFLGLR     D L IAG    IG+ + ++QQNQ+QKPWQG
Sbjct: 452  AGNN------INEGLTRDFLGLRPLSHADILTIAG----IGNCI-HDQQNQSQKPWQG 498


>ref|XP_002527396.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533206|gb|EEF34962.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 552

 Score =  405 bits (1040), Expect = e-110
 Identities = 267/580 (46%), Positives = 323/580 (55%), Gaps = 46/580 (7%)
 Frame = +3

Query: 465  MLNNLLIQPHSVMDENMSSNLTCTSDEPLASSGSRADAGTMCRQQPLASPHQTQTSVVKR 644
            M+  L+       +ENMS NLT  S E   SSG+R +     +Q     P        K+
Sbjct: 1    MMKGLIFHQQQQQEENMS-NLTSASGEASVSSGNRNETNYPPQQYFAHPPPPQSQPPAKK 59

Query: 645  KRNLPGNPDPTAEVIALSPKTLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRT 824
            KRNLPGNPDP AEVIALSPKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT
Sbjct: 60   KRNLPGNPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRT 119

Query: 825  SKE-IRKRVYVCPEPSCVHHDPSRALGDLTGIKKHFFRKHGEXXXXXXXXXXXYAVQSDW 1001
            +KE IRK+VYVCPE SCVHHDPSRALGDLTGIKKHF RKHGE           YAVQSDW
Sbjct: 120  NKEVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDW 179

Query: 1002 KAHSKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARAVT--VNPLI--STQSGN 1169
            KAHSKTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEESARA+T   NPL+  S QS  
Sbjct: 180  KAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITDAPNPLLIPSNQSAA 239

Query: 1170 SAPHMN------------LQAQFSIHDFQGVQIKRXXXXXXXXXXXXXXWLASAPTL--- 1304
            +A                + +  ++H F   + ++              WLA  P +   
Sbjct: 240  AASSATQNPISLHQVPQLMNSHQNLHAFSLKKEQQTFSTTTALRPELPPWLACPPGVLGS 299

Query: 1305 --GGGPGPPHIDLSQTIFQRFEHEFSQN-----QQTSSTHENSNLXXXXXXXXXXXXXXX 1463
              G GPGPPH    QT  +   H  S +     Q   S++ N +L               
Sbjct: 300  GSGHGPGPPH--HQQTPIE--HHHLSSSILNFQQDLGSSNPNPSLGPTLPHYQAAPPPSP 355

Query: 1464 HMSATALLQKAAQ--XXXXXXXXXXXXLIRP-------QNSHMSANTGNPTAATACGFGL 1616
            HMSATALLQKAAQ              ++RP       + +H++A++ N  A T  GF L
Sbjct: 356  HMSATALLQKAAQMGATMSSKTTTAGLMMRPHQHQHQHEQAHVTADSTNNNANTT-GFVL 414

Query: 1617 GLSSHEELESGLMHTLTAFGNKTSTIPSGLMGHLTGASTSPRASLLQEM--SCLTSDSGF 1790
             LSS ++        L A G   S + S       G        LLQEM  S  ++ SGF
Sbjct: 415  NLSSRDQ-------ELAASGGGGSFVHSLQAAGANGV-------LLQEMMNSLSSAASGF 460

Query: 1791 DG------SSFEEAF-GGMLDTKSERNPTQNPKTTERTTKLPCRNXXXXXXXXXXLTRDF 1949
            +G      +SFE+AF  G+L+   +     +   ++ TT                LTRDF
Sbjct: 461  EGTATATATSFEDAFVSGVLNNSKKDGNFLDGSLSKATTN--------GNNGGEDLTRDF 512

Query: 1950 LGLRAFPRRDFLNI-AGLDQRIGSAVPYEQQNQNQKPWQG 2066
            LGLRAF   D LN+ AGL   + ++   +QQNQ+QK W+G
Sbjct: 513  LGLRAFSHSDILNMAAGLGNCVNTSHEQQQQNQSQKTWRG 552