BLASTX nr result

ID: Coptis25_contig00004337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004337
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266905.1| PREDICTED: uncharacterized protein LOC100247...    77   7e-12
ref|XP_004143951.1| PREDICTED: uncharacterized protein LOC101208...    76   1e-11
ref|XP_002873121.1| glutaredoxin family protein [Arabidopsis lyr...    76   1e-11
gb|ABY79171.1| At5g03870-like protein [Arabidopsis lyrata]             76   1e-11
emb|CAN65189.1| hypothetical protein VITISV_032100 [Vitis vinifera]    76   1e-11

>ref|XP_002266905.1| PREDICTED: uncharacterized protein LOC100247840 [Vitis vinifera]
          Length = 371

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 6/88 (6%)
 Frame = -2

Query: 247 LEKFPKKCPPGGNNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDI-INPAYEE 86
           L ++P+KCPPGG +S+VLYT+          D NR+RS  ++ ++ +  RD+ ++  + +
Sbjct: 213 LSEYPEKCPPGGADSLVLYTTSLGGVRRTYEDCNRLRSVLESHRVVFDERDVSLHGEFLK 272

Query: 85  ELRNLLGELAELPALFVKGRYIGGTNEV 2
           ELR LLGE + +P LFVKGRY+GG  EV
Sbjct: 273 ELRELLGEESSVPRLFVKGRYVGGVEEV 300


>ref|XP_004143951.1| PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus]
           gi|449517489|ref|XP_004165778.1| PREDICTED:
           uncharacterized LOC101208965 [Cucumis sativus]
          Length = 361

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
 Frame = -2

Query: 445 PYEENDQESKTIPANMEFNSSSTFKPVDPR---RSGF--NIDSQKEKRLQVRDDQTGNTS 281
           P  +   ESKT         ++TF+P   +   R+G      S KE    VRD +     
Sbjct: 138 PSSKPTAESKTAG----LRKTATFRPGPEKPEQRTGDPDRFKSVKENIFLVRDREERERE 193

Query: 280 IEKVAYTYEMLLEKFPKKCPPGGNNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSL 116
            +K    ++ L E FP+KCPPGG  +VVLYT+          D NRV+S  +  Q+    
Sbjct: 194 GQKPV-RFDPLSE-FPEKCPPGGAETVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDE 251

Query: 115 RDI-INPAYEEELRNLLGELAELPALFVKGRYIGGTNEV 2
           RD+ ++  + +EL+ LLG+ A +P +FVKGRYIGG +EV
Sbjct: 252 RDVALHGEFLKELKELLGDEATVPKMFVKGRYIGGADEV 290


>ref|XP_002873121.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318958|gb|EFH49380.1| glutaredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 387

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
 Frame = -2

Query: 256 EMLLEKFPKKCPPGGNNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDI-INPA 95
           E +LEKFP+KCPPGG NSVV+Y +          D N VRS   + ++ +S RD+ ++  
Sbjct: 224 ERILEKFPEKCPPGGENSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSV 283

Query: 94  YEEELRNLLG-ELAELPALFVKGRYIGGTNEV 2
           ++EE+R ++G +  ++PA+FVKGR +G   EV
Sbjct: 284 FKEEIRGIMGTKHVKIPAVFVKGRMLGSVEEV 315


>gb|ABY79171.1| At5g03870-like protein [Arabidopsis lyrata]
          Length = 375

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
 Frame = -2

Query: 256 EMLLEKFPKKCPPGGNNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDI-INPA 95
           E +LEKFP+KCPPGG NSVV+Y +          D N VRS   + ++ +S RD+ ++  
Sbjct: 214 ERILEKFPEKCPPGGENSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSV 273

Query: 94  YEEELRNLLG-ELAELPALFVKGRYIGGTNEV 2
           ++EE+R ++G +  ++PA+FVKGR +G   EV
Sbjct: 274 FKEEIRGIMGTKHVKIPAVFVKGRMLGSVEEV 305


>emb|CAN65189.1| hypothetical protein VITISV_032100 [Vitis vinifera]
          Length = 372

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 6/88 (6%)
 Frame = -2

Query: 247 LEKFPKKCPPGGNNSVVLYTSL-----DVMGDTNRVRSTFQNLQINYSLRDI-INPAYEE 86
           L ++P+KCPPGG +S+VLYT+          D NR+RS  ++ ++ +  RD+ ++  + +
Sbjct: 214 LSEYPEKCPPGGADSLVLYTTSLGGVRRTYEDCNRLRSVLESHRVVFDERDVSLHGEFLK 273

Query: 85  ELRNLLGELAELPALFVKGRYIGGTNEV 2
           ELR LLGE   +P LFVKGRY+GG  EV
Sbjct: 274 ELRELLGEEXSVPRLFVKGRYVGGVEEV 301


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