BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004333
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]   189   1e-45
ref|XP_002514782.1| chromatin assembly factor 1, subunit A, puta...   179   1e-42
ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arab...   175   2e-41
gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]            174   6e-41
ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Ara...   174   6e-41

>emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]
          Length = 872

 Score =  189 bits (481), Expect = 1e-45
 Identities = 97/169 (57%), Positives = 129/169 (76%), Gaps = 17/169 (10%)
 Frame = -1

Query: 1274 PYSKLVDKIYDKVRSRD---GVTLASVRSAVLLVGQRSIYGIANADADVLEDSSEECLWC 1104
            P SKLV +IY+KV+ RD   GVTLA+V+S+ +LVGQR  YG+ NADADVLED +  CLWC
Sbjct: 93   PLSKLVSEIYEKVKVRDNGGGVTLATVKSSAVLVGQRLAYGVPNADADVLEDETASCLWC 152

Query: 1103 WETRDMKLIPTAQRGPLYVRRTCRKKIQDRISAVSA--------------ALQVLDSHVD 966
            WETRD+KL+P + RG L +RRTCRKK+ +RISAVSA              AL+  +S  +
Sbjct: 153  WETRDIKLMPKSVRGLLKIRRTCRKKVHERISAVSAASYQHLHLISAMINALEKPESDQN 212

Query: 965  HKYDVMKASEKLGKVLNEAEIRLLVENLLQKSGSEMADKETKLKEKVLI 819
            +KYD++KASEKL KVLNEA+IRLL+E+++QK G++MA+K+ K +EK+LI
Sbjct: 213  YKYDLIKASEKLAKVLNEADIRLLIESMVQKDGADMAEKDVKREEKILI 261



 Score =  144 bits (363), Expect = 5e-32
 Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 2/197 (1%)
 Frame = -1

Query: 587 LKEQLSLKKQATLMQRFFKCK--TTSHQGDPSSTKAVTSDSPGKGDVVTANAVTLSMDSI 414
           LK+QL+++KQA++M+RF K     ++   D SSTKA TSDS          +VTLSMD +
Sbjct: 339 LKKQLAIQKQASIMERFVKRNKNNSTSLNDQSSTKATTSDSSTNKSEKMPESVTLSMDFV 398

Query: 413 FSLKEDMDANELQRIQKDAWXXXXXXXXXXXSMHWGIRQKPKAALVKELKLQGSSSGTGV 234
            S K+ +D+ E+++    +W             HWGIR+KPK  LVKE+KL G       
Sbjct: 399 LSSKDGIDSEEIRKSHLASWRYSDRSNRK---QHWGIRRKPKTELVKEIKLTG------- 448

Query: 233 LSNTTIANKNLVRGDGSNSEKVLDGWADNTPDDRLYDSSANCCPTYTQICNRTKKLLQFD 54
                  N+ L R +  + EK++DGW + T +DRL+D++A  CP+  Q     K+LLQFD
Sbjct: 449 -------NRGLARDNELSIEKIVDGWEETTAEDRLFDTNAYSCPSDAQEVQSNKQLLQFD 501

Query: 53  KSHRPAYYGTMSVKSDV 3
           KSHRPA+YG    KS +
Sbjct: 502 KSHRPAFYGIWPKKSQI 518


>ref|XP_002514782.1| chromatin assembly factor 1, subunit A, putative [Ricinus communis]
            gi|223545833|gb|EEF47336.1| chromatin assembly factor 1,
            subunit A, putative [Ricinus communis]
          Length = 823

 Score =  179 bits (454), Expect = 1e-42
 Identities = 93/156 (59%), Positives = 121/156 (77%), Gaps = 6/156 (3%)
 Frame = -1

Query: 1268 SKLVDKIYDKVRSRDG---VTLASVRSAVLLVGQRSIYGIANADADVLEDSSEECLWCWE 1098
            SKLV+ IY+K+ + +     T+A V+SAVL VGQR +YG+ N DADVLED + + LWCWE
Sbjct: 92   SKLVEVIYEKLSNFNSNMIATVALVKSAVLFVGQRVMYGVPNVDADVLEDQTPDSLWCWE 151

Query: 1097 TRDMKLIPTAQRGPLYVRRTCRKKIQDRISAVS---AALQVLDSHVDHKYDVMKASEKLG 927
            TRD+KL+P + RG + +RR CRKKI +RISAVS   AALQ  +S   HK+D+MKASEKL 
Sbjct: 152  TRDLKLLPKSVRGEIKIRRICRKKIHERISAVSAMLAALQKSESDQSHKFDLMKASEKLS 211

Query: 926  KVLNEAEIRLLVENLLQKSGSEMADKETKLKEKVLI 819
            KVL EA+IRLLV+ LLQK+G+E+ADKE K ++K+LI
Sbjct: 212  KVLQEADIRLLVDTLLQKNGAELADKEAKREQKLLI 247



 Score =  112 bits (281), Expect = 2e-22
 Identities = 75/202 (37%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
 Frame = -1

Query: 587 LKEQLSLKKQATLMQRFFKCKTTSHQ--GDPSSTKAVTSDSPGKGDVVTANAVTLSMDSI 414
           LK + ++KKQA++M+RF K   ++     D +STKA TSDS  K  +    AVTL+MD  
Sbjct: 325 LKRKNAIKKQASIMERFLKRSKSNSPCPNDETSTKATTSDSVSKQRLKIPEAVTLAMDFT 384

Query: 413 FSLKEDMDANELQRIQKDAWXXXXXXXXXXXSMHWGIRQKPKAALVKELKLQGSSSGTGV 234
            S  +D+  + + +    +W             HW IRQKPK  L KELKL G       
Sbjct: 385 LSSNDDIGIDNIWKFHLSSWCHMGRSIRSNRKQHWSIRQKPKTELFKELKLTG------- 437

Query: 233 LSNTTIANKNLVRGDGSNSEKVLDGWADNTPDDR-----LYDSSANCCPTYTQICNRTKK 69
                  N++L   D S+ EK++ GW + + DDR     L  S A           + K+
Sbjct: 438 -------NRDLAHDDESSVEKLVSGW-EQSSDDRSCVMNLESSDARKI--------QRKQ 481

Query: 68  LLQFDKSHRPAYYGTMSVKSDV 3
           LLQFDKSHRPA+YG    KS V
Sbjct: 482 LLQFDKSHRPAFYGIWPKKSHV 503


>ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arabidopsis lyrata subsp.
            lyrata] gi|297334251|gb|EFH64669.1| hypothetical protein
            ARALYDRAFT_894101 [Arabidopsis lyrata subsp. lyrata]
          Length = 814

 Score =  175 bits (444), Expect = 2e-41
 Identities = 86/156 (55%), Positives = 123/156 (78%), Gaps = 4/156 (2%)
 Frame = -1

Query: 1274 PYSKLVDKIYDKVRSR-DGVTLASVRSAVLLVGQRSIYGIANADADVLEDSSEECLWCWE 1098
            P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR  YG+ NADADVLED +E CLWCWE
Sbjct: 94   PLSKLVDEIYLKLKEKIESVTIVAVKSAVVSVGQRVSYGVLNADADVLEDDTESCLWCWE 153

Query: 1097 TRDMKLIPTAQRGPLYVRRTCRKKIQDRISAVS---AALQVLDSHVDHKYDVMKASEKLG 927
            TRD+K++P + RG L +RRTCRKKI +RI+AVS   AA+Q  ++    + D+ KASEKLG
Sbjct: 154  TRDLKMLPNSIRGVLKIRRTCRKKIHERITAVSAMLAAVQREETEKSWRSDLSKASEKLG 213

Query: 926  KVLNEAEIRLLVENLLQKSGSEMADKETKLKEKVLI 819
            K+LNE +IR  ++N++QK+ +EMA+K++K +EK+L+
Sbjct: 214  KILNEVDIRSFMDNMMQKNSTEMAEKDSKREEKLLL 249



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
 Frame = -1

Query: 587 LKEQLSLKKQATLMQRFFKCKTTSHQGDPS-STKAVTSDSPG--KGDVVTANAVTLSMDS 417
           LK+QL ++KQA++M+RF K    S    P   +  VT+  P   K D  +   +  ++D+
Sbjct: 326 LKKQLQVQKQASIMERFLKKSKDSSVTQPKLPSSEVTAQEPSCTKHDNESGTVIQ-AIDN 384

Query: 416 IFSLKEDMDANELQRIQKDAWXXXXXXXXXXXSMHWGIRQKPKAALVKELKLQGSSSGTG 237
            FS   +   ++++R    +W             HWG+R++PK+ L  +LKL        
Sbjct: 385 AFSTTCEATVDDIRREHFASWRQLGHSLLSSKK-HWGMRRQPKSELFPKLKLA------- 436

Query: 236 VLSNTTIANKNLVRGDGSNSEKVLDGWADNTPDDRLYDSSANCCPTYTQICNRTKKLLQF 57
               T+    N+ +    + EK  DG        R  +SS++      +   R K+LLQF
Sbjct: 437 ----TSDGEPNMEKHGDGHEEKNFDG----VTCIRQCESSSSD----RKKSRRAKQLLQF 484

Query: 56  DKSHRPAYYGTMSVKSDV 3
           DKS RP +YG    +S V
Sbjct: 485 DKSCRPGFYGIWPSQSQV 502


>gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]
          Length = 406

 Score =  174 bits (440), Expect = 6e-41
 Identities = 86/156 (55%), Positives = 120/156 (76%), Gaps = 4/156 (2%)
 Frame = -1

Query: 1274 PYSKLVDKIYDKVRSR-DGVTLASVRSAVLLVGQRSIYGIANADADVLEDSSEECLWCWE 1098
            P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR  YG+ N DADVLED SE CLWCWE
Sbjct: 94   PLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWE 153

Query: 1097 TRDMKLIPTAQRGPLYVRRTCRKKIQDRISAVSAALQVLDSHVDHKY---DVMKASEKLG 927
            TRD+K++P++ RG L +RRTCRKKI +RI+AVSA L  L      K    D+ KA+EKLG
Sbjct: 154  TRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLG 213

Query: 926  KVLNEAEIRLLVENLLQKSGSEMADKETKLKEKVLI 819
            K+L+E +IR  ++N++QK+ SEMA+K++K +EK+L+
Sbjct: 214  KILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLL 249


>ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana]
            gi|332196259|gb|AEE34380.1| chromatin assembly factor-1
            (FASCIATA1) [Arabidopsis thaliana]
          Length = 807

 Score =  174 bits (440), Expect = 6e-41
 Identities = 86/156 (55%), Positives = 120/156 (76%), Gaps = 4/156 (2%)
 Frame = -1

Query: 1274 PYSKLVDKIYDKVRSR-DGVTLASVRSAVLLVGQRSIYGIANADADVLEDSSEECLWCWE 1098
            P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR  YG+ N DADVLED SE CLWCWE
Sbjct: 94   PLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWE 153

Query: 1097 TRDMKLIPTAQRGPLYVRRTCRKKIQDRISAVSAALQVLDSHVDHKY---DVMKASEKLG 927
            TRD+K++P++ RG L +RRTCRKKI +RI+AVSA L  L      K    D+ KA+EKLG
Sbjct: 154  TRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLG 213

Query: 926  KVLNEAEIRLLVENLLQKSGSEMADKETKLKEKVLI 819
            K+L+E +IR  ++N++QK+ SEMA+K++K +EK+L+
Sbjct: 214  KILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLL 249



 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
 Frame = -1

Query: 587 LKEQLSLKKQATLMQRFFKCKTTSHQGDPS--STKAVTSDSPGKGDVVTANAVTLSMDSI 414
           LK+QL ++KQA++M+RF K    S    P   S++    +            V  ++D+ 
Sbjct: 318 LKKQLQVQKQASIMERFLKKSKDSSLTQPKLPSSEVTAQELSCTKHENEIGKVVQAIDNA 377

Query: 413 FSLKEDMDANELQRIQKDAWXXXXXXXXXXXSMHWGIRQKPKAALVKELKLQGSSSGTGV 234
           FS   +   ++++R    +W             HWG+R++PK+ L  +LKL   S+ +GV
Sbjct: 378 FSTTCEATVDDIRREHFASWRQLGHLLSSSKK-HWGMRRQPKSELFPKLKL---STNSGV 433

Query: 233 LSNTTIANKNLVRGDGS-NSEKVLDGWADNTPDDRLYDSSANCCPTYT--QICNRTKKLL 63
            S            DG  N EK  DG  +N  D R       C P+ +  +   R K+LL
Sbjct: 434 TS------------DGEPNMEKQGDGCEENNFDGR------QCKPSSSNRKKSRRVKQLL 475

Query: 62  QFDKSHRPAYYGTMSVKSDV 3
           QFDKS RP +YG    +S V
Sbjct: 476 QFDKSCRPGFYGIWPSQSQV 495