BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004329
         (2248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282901.1| PREDICTED: sec-independent protein transloca...   409   e-111
emb|CAN69811.1| hypothetical protein VITISV_043107 [Vitis vinifera]   408   e-111
ref|XP_003536657.1| PREDICTED: sec-independent protein transloca...   393   e-107
gb|ACU19983.1| unknown [Glycine max]                                  387   e-105
ref|XP_002532235.1| Sec-independent protein translocase protein ...   384   e-104

>ref|XP_002282901.1| PREDICTED: sec-independent protein translocase protein TatC [Vitis
            vinifera] gi|297737744|emb|CBI26945.3| unnamed protein
            product [Vitis vinifera]
          Length = 352

 Score =  409 bits (1052), Expect = e-111
 Identities = 227/360 (63%), Positives = 251/360 (69%), Gaps = 2/360 (0%)
 Frame = +2

Query: 83   MGCTSTSTALISHSPHISNSCFTSKQRTTSFVHFKSSIRRRRTNNKYQFFPNQLISYKRL 262
            MG TS   +L+     I+N CF ++            I RRR      F P+Q +  +  
Sbjct: 1    MGSTSGFFSLL----RINNCCFFNQLHPIRHHKPPLQIHRRRAPG---FGPSQRLRLRNF 53

Query: 263  GRIVCSAVEDLNGQKQQL--GGVGSVLEEKPDPGDNLEDGAIENADQAEGSNSVYDFLYP 436
              +VCSAVED    KQQ   GGVGS++EE+P   D+ ED  ++N DQ +  N +YDFLYP
Sbjct: 54   STLVCSAVEDDARDKQQQLGGGVGSIVEERPVAEDSGED-TLQNVDQDKKENGLYDFLYP 112

Query: 437  SKELLPDDKEMSLFDHLEELRQRLFVSVLAVGAAMLGCFAFSKELIMILEAPVKSQGVRF 616
            SKELLPDDKEMS+FDHLEELRQR+FVSVLAVGAAMLG FAFSKEL+MILEAPVK QGVRF
Sbjct: 113  SKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAMLGSFAFSKELVMILEAPVKEQGVRF 172

Query: 617  LQLAPGEFFFTTVKVSGYCGLLLGSPIILYEIIAFVLPGLTSSERRFLGPIVLGSSVLFY 796
            LQLAPGEFFFTT+KVSGYCGLLLGSPIILYEIIAFVLPGLT +ER FLGPIVLGSSVLFY
Sbjct: 173  LQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERMFLGPIVLGSSVLFY 232

Query: 797  AGIFFSYSVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFXXXXXXXXXX 976
            AGI FSYS+LTPAALNFFV YAEG VESLWSIDQYFEFV VLMFSTGLSF          
Sbjct: 233  AGIIFSYSILTPAALNFFVNYAEGAVESLWSIDQYFEFVFVLMFSTGLSFQVPVIQLLLG 292

Query: 977  XXXXXXXXXMLSIWRYXXXXXXXXXXXLTPSTDPLTQMXXXXXXXXXXXXXAWMAKLTGR 1156
                     MLSIWRY           LTPSTDPLTQ+             AWM KL GR
Sbjct: 293  QVGVVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVKLMGR 352


>emb|CAN69811.1| hypothetical protein VITISV_043107 [Vitis vinifera]
          Length = 352

 Score =  408 bits (1049), Expect = e-111
 Identities = 227/360 (63%), Positives = 250/360 (69%), Gaps = 2/360 (0%)
 Frame = +2

Query: 83   MGCTSTSTALISHSPHISNSCFTSKQRTTSFVHFKSSIRRRRTNNKYQFFPNQLISYKRL 262
            MG TS   +L+     I+N CF ++            I RRR      F P+Q +  +  
Sbjct: 1    MGSTSGXFSLL----RINNCCFFNQLHPIRHHKPPLQIHRRRAPG---FGPSQRLRLRNF 53

Query: 263  GRIVCSAVEDLNGQKQQL--GGVGSVLEEKPDPGDNLEDGAIENADQAEGSNSVYDFLYP 436
              +VCSAVED    KQQ   GGVGS +EE+P   D+ ED  ++N DQ +  N +YDFLYP
Sbjct: 54   STLVCSAVEDDARDKQQQLGGGVGSXVEERPVAEDSGED-TLQNVDQDKKENGLYDFLYP 112

Query: 437  SKELLPDDKEMSLFDHLEELRQRLFVSVLAVGAAMLGCFAFSKELIMILEAPVKSQGVRF 616
            SKELLPDDKEMS+FDHLEELRQR+FVSVLAVGAAMLG FAFSKEL+MILEAPVK QGVRF
Sbjct: 113  SKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAMLGSFAFSKELVMILEAPVKEQGVRF 172

Query: 617  LQLAPGEFFFTTVKVSGYCGLLLGSPIILYEIIAFVLPGLTSSERRFLGPIVLGSSVLFY 796
            LQLAPGEFFFTT+KVSGYCGLLLGSPIILYEIIAFVLPGLT +ER FLGPIVLGSSVLFY
Sbjct: 173  LQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERMFLGPIVLGSSVLFY 232

Query: 797  AGIFFSYSVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFXXXXXXXXXX 976
            AGI FSYS+LTPAALNFFV YAEG VESLWSIDQYFEFV VLMFSTGLSF          
Sbjct: 233  AGIIFSYSILTPAALNFFVNYAEGAVESLWSIDQYFEFVFVLMFSTGLSFQVPVIQLLLG 292

Query: 977  XXXXXXXXXMLSIWRYXXXXXXXXXXXLTPSTDPLTQMXXXXXXXXXXXXXAWMAKLTGR 1156
                     MLSIWRY           LTPSTDPLTQ+             AWM KL GR
Sbjct: 293  QVGVVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVKLMGR 352


>ref|XP_003536657.1| PREDICTED: sec-independent protein translocase protein TatC-like
            [Glycine max]
          Length = 346

 Score =  393 bits (1010), Expect = e-107
 Identities = 218/336 (64%), Positives = 236/336 (70%), Gaps = 8/336 (2%)
 Frame = +2

Query: 173  FVHFKSSIRRRRTNNKYQFFPNQLISYKRLGRIVCSAVEDLNGQKQQ-----LGGVGSVL 337
            F   ++SIR    N     FP      KR    VC AV+D   QKQQ       G+GS L
Sbjct: 16   FGSLRTSIRVGNPNPSGLSFPR-----KRNNSFVCLAVDDELRQKQQDLSTSATGLGSAL 70

Query: 338  EEKPDPGDNLEDGAIE---NADQAEGSNSVYDFLYPSKELLPDDKEMSLFDHLEELRQRL 508
            EE+P+  D  E  A E   N  Q     ++YDFLYP KELLPDDKEMS+FDHLEELRQR+
Sbjct: 71   EERPENADLFESTAEETQGNFGQDGDRGAIYDFLYPDKELLPDDKEMSIFDHLEELRQRI 130

Query: 509  FVSVLAVGAAMLGCFAFSKELIMILEAPVKSQGVRFLQLAPGEFFFTTVKVSGYCGLLLG 688
            FVSVLAVGA++LGCFAFSKELIMILEAPVK+QGVRFLQLAPGEFFFTT+KVSGYCGLLLG
Sbjct: 131  FVSVLAVGASILGCFAFSKELIMILEAPVKTQGVRFLQLAPGEFFFTTLKVSGYCGLLLG 190

Query: 689  SPIILYEIIAFVLPGLTSSERRFLGPIVLGSSVLFYAGIFFSYSVLTPAALNFFVTYAEG 868
            SP+ILYE+IAFVLPGLT SERRFLGPIVLGSSVLFYAGI FSY VLTPAALNFFVTYAEG
Sbjct: 191  SPVILYEVIAFVLPGLTKSERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEG 250

Query: 869  VVESLWSIDQYFEFVLVLMFSTGLSFXXXXXXXXXXXXXXXXXXXMLSIWRYXXXXXXXX 1048
             VESLWSIDQYFEFVLVLMFSTGLSF                   MLSIWRY        
Sbjct: 251  AVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVA 310

Query: 1049 XXXLTPSTDPLTQMXXXXXXXXXXXXXAWMAKLTGR 1156
               +TPSTDPLTQ+             AWM KLTGR
Sbjct: 311  AAIVTPSTDPLTQILLAAPLLGLYLGGAWMVKLTGR 346


>gb|ACU19983.1| unknown [Glycine max]
          Length = 343

 Score =  387 bits (994), Expect = e-105
 Identities = 213/333 (63%), Positives = 233/333 (69%), Gaps = 5/333 (1%)
 Frame = +2

Query: 173  FVHFKSSIRRRRTNNKYQFFPNQLISYKRLGRIVCSAVEDLNGQKQQ-----LGGVGSVL 337
            F   ++SIR    N     FP      KR    VC AV+D   QKQQ       G+GS L
Sbjct: 16   FGSLRTSIRVGNPNPSGLSFPR-----KRNNSFVCLAVDDELRQKQQDLSTSATGLGSAL 70

Query: 338  EEKPDPGDNLEDGAIENADQAEGSNSVYDFLYPSKELLPDDKEMSLFDHLEELRQRLFVS 517
            EE+PD  ++       N  Q     ++YDFLYP KE LPDDKEMS+FDHLEELRQR+FVS
Sbjct: 71   EERPDLFESTAVETQGNFGQDGDRGAIYDFLYPDKEFLPDDKEMSIFDHLEELRQRIFVS 130

Query: 518  VLAVGAAMLGCFAFSKELIMILEAPVKSQGVRFLQLAPGEFFFTTVKVSGYCGLLLGSPI 697
            VLAVGA++LGCFAFSKELIMILEAPVK+QGVRFLQLAPGEFFFTT+KVSG+CGLLLGSP+
Sbjct: 131  VLAVGASILGCFAFSKELIMILEAPVKTQGVRFLQLAPGEFFFTTLKVSGHCGLLLGSPV 190

Query: 698  ILYEIIAFVLPGLTSSERRFLGPIVLGSSVLFYAGIFFSYSVLTPAALNFFVTYAEGVVE 877
            ILYE+IAFVLPGLT SERRFLGPIVLGSSVLFYAGI FSY VLTPAALNFFVTYAEG VE
Sbjct: 191  ILYEVIAFVLPGLTKSERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEGAVE 250

Query: 878  SLWSIDQYFEFVLVLMFSTGLSFXXXXXXXXXXXXXXXXXXXMLSIWRYXXXXXXXXXXX 1057
            SLWSIDQYFEFVLVLMFSTGLSF                   MLSIWRY           
Sbjct: 251  SLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAI 310

Query: 1058 LTPSTDPLTQMXXXXXXXXXXXXXAWMAKLTGR 1156
            +TPSTDPLTQ+             AWM KLTGR
Sbjct: 311  VTPSTDPLTQILLAAPLLGLYLGGAWMVKLTGR 343


>ref|XP_002532235.1| Sec-independent protein translocase protein tatC, putative [Ricinus
            communis] gi|223528092|gb|EEF30166.1| Sec-independent
            protein translocase protein tatC, putative [Ricinus
            communis]
          Length = 340

 Score =  384 bits (987), Expect = e-104
 Identities = 218/361 (60%), Positives = 257/361 (71%), Gaps = 8/361 (2%)
 Frame = +2

Query: 98   TSTALISHSPHIS-NSCFTSK-QRTTSFVHFKSSIRRRRTNNKYQFFPNQLISYKRLGRI 271
            +STA+I   P++  ++CF  + + T +  HF SS++   T  + +F  ++  + +RL R+
Sbjct: 3    SSTAII---PYLQLHNCFCKQFEITRNQQHFTSSLQLNSTRGRLRFSSSR--NTRRLSRV 57

Query: 272  VC-SAVEDLNGQKQQ-----LGGVGSVLEEKPDPGDNLEDGAIENADQAEGSNSVYDFLY 433
            VC +AV+D   +KQ+        +GS LE++P                 EGS ++Y+FLY
Sbjct: 58   VCLAAVDDDITEKQKQDSPTTSSLGSALEDRP-----------------EGS-ALYNFLY 99

Query: 434  PSKELLPDDKEMSLFDHLEELRQRLFVSVLAVGAAMLGCFAFSKELIMILEAPVKSQGVR 613
            P+KELLPDDKEMS+FDHLEELRQR+FVSVLAVGAA+LGCFAFSKELIM+LEAPVK QGVR
Sbjct: 100  PNKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIMVLEAPVKVQGVR 159

Query: 614  FLQLAPGEFFFTTVKVSGYCGLLLGSPIILYEIIAFVLPGLTSSERRFLGPIVLGSSVLF 793
            FLQLAPGEFFFTT+KVSGYCGLLLGSPIILYEIIAFVLPGLT +ERRFLGPIVLGSSVLF
Sbjct: 160  FLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF 219

Query: 794  YAGIFFSYSVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFXXXXXXXXX 973
            YAGI FSY +LTPAALNFFV+YAEGVVESLWSIDQYFEFVLVLMFSTGLSF         
Sbjct: 220  YAGIIFSYLILTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLL 279

Query: 974  XXXXXXXXXXMLSIWRYXXXXXXXXXXXLTPSTDPLTQMXXXXXXXXXXXXXAWMAKLTG 1153
                      MLSIWRY           LTPSTDPLTQ+             AW+ KLTG
Sbjct: 280  GQVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWVVKLTG 339

Query: 1154 R 1156
            R
Sbjct: 340  R 340