BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004320
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263668.1| PREDICTED: polygalacturonase At1g48100-like ...   121   6e-25
ref|XP_002519290.1| Polygalacturonase precursor, putative [Ricin...   120   7e-25
ref|XP_003534803.1| PREDICTED: polygalacturonase At1g48100-like ...   110   1e-21
ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like ...   110   1e-21
ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like ...   110   1e-21

>ref|XP_002263668.1| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
          Length = 477

 Score =  121 bits (303), Expect = 6e-25
 Identities = 67/121 (55%), Positives = 73/121 (60%), Gaps = 18/121 (14%)
 Frame = -2

Query: 808 SNVEGRTHFHKDKSKHT-DKGTPVGXXXXXXXXXXXXXXXDL-----------------N 683
           SNVEGRTHFHK   KH  DKG+PV                                   +
Sbjct: 22  SNVEGRTHFHK---KHNNDKGSPVADPPAYSPDPSPPPVYPPPVPSDPSPNPDDPGNSNS 78

Query: 682 NPCVFDVTSFGAVGDGSTDDTEAFTSAWKAACAVESGVLYAPADYEFTITSTIFSGPCKP 503
            PCVFDVTSFGAVGDG+TDDT AF  AWKAACAVESG++  PAD+ F ITSTIFSGPCKP
Sbjct: 79  EPCVFDVTSFGAVGDGTTDDTAAFMEAWKAACAVESGIVLVPADHVFMITSTIFSGPCKP 138

Query: 502 G 500
           G
Sbjct: 139 G 139


>ref|XP_002519290.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223541605|gb|EEF43154.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 479

 Score =  120 bits (302), Expect = 7e-25
 Identities = 66/123 (53%), Positives = 75/123 (60%), Gaps = 20/123 (16%)
 Frame = -2

Query: 808 SNVEGRTHFHKDK---SKHTDKGTPVGXXXXXXXXXXXXXXXDLNNP------------- 677
           SNVEGR H+HK K   SKHT  G+PV                  N+P             
Sbjct: 22  SNVEGRYHYHKPKGKPSKHT--GSPVSPTPDNAPAEPSVPSTPANSPLVPSDPYPNDPGK 79

Query: 676 ----CVFDVTSFGAVGDGSTDDTEAFTSAWKAACAVESGVLYAPADYEFTITSTIFSGPC 509
               C+FDVTS+GAVGDGSTDDT AF +AWKAACAVESGV+ AP+ Y F ITSTIFSGPC
Sbjct: 80  STSDCIFDVTSYGAVGDGSTDDTAAFVAAWKAACAVESGVILAPSGYSFMITSTIFSGPC 139

Query: 508 KPG 500
           +PG
Sbjct: 140 QPG 142


>ref|XP_003534803.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 474

 Score =  110 bits (275), Expect = 1e-21
 Identities = 58/116 (50%), Positives = 70/116 (60%), Gaps = 9/116 (7%)
 Frame = -2

Query: 820 VFSLSNVEGRTHFHKDKSKHTDKGTPV--GXXXXXXXXXXXXXXXDLNNP-------CVF 668
           + +L NVEGR H+H+ K K +   TP                     N+P       C+F
Sbjct: 19  IHNLDNVEGRYHYHRGKKKISPAPTPPEDSPSPPPSNSPSVPSDPYPNDPPGDSPSGCIF 78

Query: 667 DVTSFGAVGDGSTDDTEAFTSAWKAACAVESGVLYAPADYEFTITSTIFSGPCKPG 500
           DV SFGAVGDGS DDT+AF +AWK ACAVESGV+  P D+ F ITSTIF+GPCKPG
Sbjct: 79  DVRSFGAVGDGSADDTDAFVAAWKEACAVESGVVLVPEDHCFKITSTIFTGPCKPG 134


>ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like isoform 2 [Glycine max]
          Length = 483

 Score =  110 bits (274), Expect = 1e-21
 Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
 Frame = -2

Query: 820 VFSLSNVEGRTHFHKDKSKHTDKGTPVGXXXXXXXXXXXXXXXDLNNP------------ 677
           + +L NVEGR H+HK + K++    P                   + P            
Sbjct: 18  IHNLDNVEGRYHYHKGQKKNSPAPNPPAESPTPPEDPPSPPSNSPSVPSDPYPNDPPGDS 77

Query: 676 ---CVFDVTSFGAVGDGSTDDTEAFTSAWKAACAVESGVLYAPADYEFTITSTIFSGPCK 506
              C+FDV SFGAVGDGS DDT+AF +AWK ACAVESGV+  P DY F ITSTIF+GPCK
Sbjct: 78  PSGCIFDVRSFGAVGDGSADDTDAFVAAWKEACAVESGVVLVPEDYCFKITSTIFTGPCK 137

Query: 505 PG 500
           PG
Sbjct: 138 PG 139


>ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like isoform 1 [Glycine max]
          Length = 479

 Score =  110 bits (274), Expect = 1e-21
 Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
 Frame = -2

Query: 820 VFSLSNVEGRTHFHKDKSKHTDKGTPVGXXXXXXXXXXXXXXXDLNNP------------ 677
           + +L NVEGR H+HK + K++    P                   + P            
Sbjct: 18  IHNLDNVEGRYHYHKGQKKNSPAPNPPAESPTPPEDPPSPPSNSPSVPSDPYPNDPPGDS 77

Query: 676 ---CVFDVTSFGAVGDGSTDDTEAFTSAWKAACAVESGVLYAPADYEFTITSTIFSGPCK 506
              C+FDV SFGAVGDGS DDT+AF +AWK ACAVESGV+  P DY F ITSTIF+GPCK
Sbjct: 78  PSGCIFDVRSFGAVGDGSADDTDAFVAAWKEACAVESGVVLVPEDYCFKITSTIFTGPCK 137

Query: 505 PG 500
           PG
Sbjct: 138 PG 139