BLASTX nr result

ID: Coptis25_contig00004258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004258
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF06706.1| UP-9A [Nicotiana tabacum]                               69   6e-10
ref|XP_002321340.1| predicted protein [Populus trichocarpa] gi|2...    66   5e-09
ref|XP_002269666.2| PREDICTED: uncharacterized protein LOC100267...    65   7e-09
ref|XP_003526781.1| PREDICTED: uncharacterized protein LOC100813...    65   1e-08
dbj|BAM64848.1| hypothetical protein [Beta vulgaris]                   64   2e-08

>gb|ABF06706.1| UP-9A [Nicotiana tabacum]
          Length = 117

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 36/54 (66%), Positives = 41/54 (75%)
 Frame = +3

Query: 261 VVEDAEENLCSQLGELEAEAVDQARLYHAEIKSLMQRLSQAQKLLQSANIVKTS 422
           V E+AEE LCSQLGELEAEAVDQAR Y   +  LM +LS AQKLL+SA+I   S
Sbjct: 62  VAEEAEERLCSQLGELEAEAVDQARTYRTRVIHLMDQLSLAQKLLESASITVPS 115


>ref|XP_002321340.1| predicted protein [Populus trichocarpa] gi|222868336|gb|EEF05467.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/49 (67%), Positives = 37/49 (75%)
 Frame = +3

Query: 261 VVEDAEENLCSQLGELEAEAVDQARLYHAEIKSLMQRLSQAQKLLQSAN 407
           V E+AEE+LCSQLGELEAEA +QAR YH+ I SLM  LSQA  LL   N
Sbjct: 48  VAEEAEESLCSQLGELEAEAANQARAYHSRILSLMNELSQAHNLLHLTN 96


>ref|XP_002269666.2| PREDICTED: uncharacterized protein LOC100267499 [Vitis vinifera]
          Length = 116

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = +3

Query: 261 VVEDAEENLCSQLGELEAEAVDQARLYHAEIKSLMQRLSQAQKLLQ 398
           V E+AEE LCSQLGELEAEAVDQAR Y+  I SLM +LSQA +L+Q
Sbjct: 63  VAEEAEERLCSQLGELEAEAVDQARQYNNRIVSLMNQLSQAHRLIQ 108


>ref|XP_003526781.1| PREDICTED: uncharacterized protein LOC100813653 [Glycine max]
          Length = 120

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +3

Query: 261 VVEDAEENLCSQLGELEAEAVDQARLYHAEIKSLMQRLSQAQKLL 395
           V E+AEE LCSQLGELEAEAV QAR YHA I SLM +LS+AQ LL
Sbjct: 62  VAEEAEERLCSQLGELEAEAVYQARDYHARIVSLMDQLSRAQSLL 106


>dbj|BAM64848.1| hypothetical protein [Beta vulgaris]
          Length = 103

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +3

Query: 261 VVEDAEENLCSQLGELEAEAVDQARLYHAEIKSLMQRLSQAQKLLQSANI 410
           V E+ EE LCSQLGELEAEAVDQAR + A + +LM+ LS+AQKLLQ  +I
Sbjct: 47  VAEEGEEMLCSQLGELEAEAVDQARDFRARMLALMEELSKAQKLLQVHSI 96


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