BLASTX nr result

ID: Coptis25_contig00004241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004241
         (2315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A...   535   e-149
ref|XP_002511583.1| conserved hypothetical protein [Ricinus comm...   474   e-131
ref|XP_004134278.1| PREDICTED: GRAM domain-containing protein 1A...   464   e-128
gb|ACU01863.1| vascular associated death 1 [Glycine max]              464   e-128
ref|XP_002892024.1| hypothetical protein ARALYDRAFT_470058 [Arab...   459   e-126

>ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A [Vitis vinifera]
            gi|297734616|emb|CBI16667.3| unnamed protein product
            [Vitis vinifera]
          Length = 639

 Score =  535 bits (1378), Expect = e-149
 Identities = 289/563 (51%), Positives = 369/563 (65%), Gaps = 16/563 (2%)
 Frame = +1

Query: 142  ELESTNGWELDPSFS------------DHNNHSGSESGSRKSIE-VQSPAYLKSEEYRLL 282
            ++ES+   E  PS S            D  + S +     K ++ +QSPA LKSEEYR L
Sbjct: 10   KVESSRSMEHSPSKSSLDSASEASDQPDRTDPSNASPNPLKDVDFLQSPAALKSEEYRQL 69

Query: 283  FRLPPDEILVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKTIPFNEVTCVRKA 462
            FRLP +E+LVQDFNCA QESIL QGHMYLFVR+ICFYSNIFGFETK+ IPF EVTCV++A
Sbjct: 70   FRLPLEEVLVQDFNCALQESILFQGHMYLFVRYICFYSNIFGFETKRIIPFQEVTCVKRA 129

Query: 463  KTAGIFPNAIEIVAGGKKNFFASFLSRDEAYRLIVDGWSQYLNGTEVLIDHQDFKSEILS 642
            KTAGIFPNAIEI+AG KK FFASFLSRDEA++LI DGW ++ +G + + + Q+  S+   
Sbjct: 130  KTAGIFPNAIEILAGEKKYFFASFLSRDEAFKLINDGWLRHSDGVKAISEQQESLSDGCL 189

Query: 643  ESSVRVIHEKPVGSEQQTNELNPFDRNKDGDLSGDCKLLSNGEDDISVPSSPLEAEENGE 822
            ++ + V  E+   SE+  NEL+  DRNKD  LS D KL S+ +DDI VP +P + ++N E
Sbjct: 190  DNGI-VADEEVKSSEEPVNELDSIDRNKDPPLSKDSKLPSDAKDDI-VPITPADQQDNVE 247

Query: 823  GDAELIDNAEHLSSGKPLVWTMEDVSAPEVPDYFTKVAESKFQVQVEDFFNLFFSDKAVT 1002
             + E +   +  SSG  L W  E+  AP+VP+Y++ VAE+KF ++VE+FF  FFSD AV 
Sbjct: 248  QNVESVPITDSSSSGNILTWKQENSVAPKVPEYYSNVAEAKFPIKVEEFFTFFFSDDAVD 307

Query: 1003 FVDTFHRICGDKDFRCTSWSAHTQFGHARELSFQHPIKFYFGAKFGHCREVQRFRVYRNS 1182
            F+++FH+ CGDK+FRCTSWS H +FGHAR+ SFQHPIK YFGAKFG CRE Q+FRVY+NS
Sbjct: 308  FIESFHKRCGDKEFRCTSWSPHDKFGHARDKSFQHPIKLYFGAKFGSCREAQKFRVYKNS 367

Query: 1183 HLVIETSQEIGDVPYADYFLVEGRWVVQKDVIETNKCCILRVYVNVAFSKKTIWKGKIEQ 1362
            HL+IETSQE+ DVPY DYF VEG W V+ D  E+N  CILRVYVNVAFSKKT+WKGKI Q
Sbjct: 368  HLIIETSQEVNDVPYGDYFTVEGLWNVESDGDESNGGCILRVYVNVAFSKKTMWKGKIVQ 427

Query: 1363 STIEECREAYSAWLDNAHEFLKQNSLEKIDGETSAPNIIPIDAQFEECERVMSPLQRLPV 1542
            ST+EECREAY+ W+  AHE LKQ +LEK +   S        A  E    +    +R   
Sbjct: 428  STVEECREAYAIWISLAHELLKQKNLEKQEEIRSTRTAENSRAHLERQVEMEETSERSHE 487

Query: 1543 TSDVLQIPSVASDTKHVNPAFENSLHGGLXXXXXXXXXXXXXXXXXXXY--LKSHNHIP- 1713
             ++  +IP +  D++ VN       HG L                   +  LK+  H+  
Sbjct: 488  AANSSKIPHMC-DSRDVN-------HGNLLQGNTVTSFSSLLSEWMVKFSTLKNQRHLQL 539

Query: 1714 XXXXXXXXXXXXMQLSIIVLLTR 1782
                        MQLSI+VLL R
Sbjct: 540  LFLITFVLILLLMQLSIVVLLAR 562



 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
 Frame = +3

Query: 1908 HMNG--IGTSRNDMAEAGAWLEKRVHYLKDEMHMVEARLERMQHEHSMLKEHFKGLEQLR 2081
            +MNG  I  S    +EA AWLEKR+H+LKDEM MVEAR+ERM+ E+  LK   K LE LR
Sbjct: 574  YMNGMDISGSGERSSEAVAWLEKRIHHLKDEMFMVEARIERMRREYVQLKAQLKDLEHLR 633

Query: 2082 KSRQ 2093
            + ++
Sbjct: 634  QLKK 637


>ref|XP_002511583.1| conserved hypothetical protein [Ricinus communis]
            gi|223548763|gb|EEF50252.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 644

 Score =  474 bits (1220), Expect = e-131
 Identities = 258/539 (47%), Positives = 338/539 (62%), Gaps = 2/539 (0%)
 Frame = +1

Query: 172  DPSFSDHNNHSGSESGSRKSIEVQSPAYLKSEEYRLLFRLPPDEILVQDFNCAFQESILL 351
            D    D ++ S S     +  E+Q  A L++EEYR LFRLPP+E +VQDFNCAFQESILL
Sbjct: 40   DADSPDRSDLSDSSPNPNRDFEIQ--AALRNEEYRQLFRLPPEEAIVQDFNCAFQESILL 97

Query: 352  QGHMYLFVRHICFYSNIFGFETKKTIPFNEVTCVRKAKTAGIFPNAIEIVAGGKKNFFAS 531
            QGHMYLF  +ICFYSNIFGFETKK IPF EV+ V++AKTAGIFPNAIEI AG +K FFAS
Sbjct: 98   QGHMYLFSHYICFYSNIFGFETKKVIPFIEVSSVKRAKTAGIFPNAIEIFAGERKYFFAS 157

Query: 532  FLSRDEAYRLIVDGWSQYLNGTEVLIDHQDFKSEILSESSVRVIHEKPVGSEQQTNELNP 711
            FLSRDEA++LI DGW Q +NG   + + Q+      S     +I EK V S +  NEL+ 
Sbjct: 158  FLSRDEAFKLINDGWLQCVNGARAITEEQESMISGSSSLDNGIIIEK-VNSFRGINELDS 216

Query: 712  FDRNKDGDLSGDCKLLSNGEDDIS-VPSSPLEAEENGEGDAELIDNAEHLSSGKPLVWTM 888
             DR+ D  LS D  L +    +I   P    E ++N + D E +D     SS    +W  
Sbjct: 217  DDRDNDVSLSNDYMLSAPSAVEIERAPERLTEIKDNVKKDVEPVDYITS-SSSTTSIWNE 275

Query: 889  EDVSAPEVPDYFTKVAESKFQVQVEDFFNLFFSDKAVTFVDTFHRICGDKDFRCTSWSAH 1068
            ED   PE+   +T+V E+KF ++VE+FFN FFSD A  F+++FH+ CGDK+FRC+ W   
Sbjct: 276  EDAEPPEIRKSYTRVGETKFPIKVEEFFNFFFSDDASNFIESFHQRCGDKEFRCSLWQPQ 335

Query: 1069 TQFGHARELSFQHPIKFYFGAKFGHCREVQRFRVYRNSHLVIETSQEIGDVPYADYFLVE 1248
             + GH R +SFQHPIK YFGAKFG C+E Q+F+VYRNSHLVIETSQEI DVPY DYF VE
Sbjct: 336  EKLGHTRNVSFQHPIKIYFGAKFGSCQEKQKFQVYRNSHLVIETSQEINDVPYGDYFRVE 395

Query: 1249 GRWVVQKDVIETNKCCILRVYVNVAFSKKTIWKGKIEQSTIEECREAYSAWLDNAHEFLK 1428
            G W V KD  E+N+ C+L++YV+VAFSKKT++KGKI QST+EECREAY+ W++ AHE LK
Sbjct: 396  GLWDVVKDADESNEGCLLQIYVDVAFSKKTVFKGKIVQSTLEECREAYATWINMAHELLK 455

Query: 1429 QNSLEKIDGETSAPNIIP-IDAQFEECERVMSPLQRLPVTSDVLQIPSVASDTKHVNPAF 1605
            Q +LE        PN+I  ++   E   R +   ++   ++D  +I  + S +  VN   
Sbjct: 456  QKNLE---SREEGPNVIQNVEVHTEVALRSVETSEKSSQSNDRGRIAQM-SGSLDVNERV 511

Query: 1606 ENSLHGGLXXXXXXXXXXXXXXXXXXXYLKSHNHIPXXXXXXXXXXXXMQLSIIVLLTR 1782
             + +                       +L+S + +             MQ+SI+VLL R
Sbjct: 512  GDLVQENFTNATAVASLLREYATRFSTFLRSQSQVSLILVVAFVVIFLMQVSILVLLNR 570



 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 32/59 (54%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
 Frame = +3

Query: 1908 HMNGIGTSRNDMA-EAGAWLEKRVHYLKDEMHMVEARLERMQHEHSMLKEHFKGLEQLR 2081
            +M G+G+S  D + EA AWLE+R+H+LKDEM MVE +LER++HEH+ +K   K L+ LR
Sbjct: 583  YMGGMGSSMGDRSTEAVAWLERRIHHLKDEMFMVEGQLERLRHEHNWIKAQLKDLDGLR 641


>ref|XP_004134278.1| PREDICTED: GRAM domain-containing protein 1A-like [Cucumis sativus]
          Length = 648

 Score =  464 bits (1195), Expect = e-128
 Identities = 260/571 (45%), Positives = 345/571 (60%), Gaps = 18/571 (3%)
 Frame = +1

Query: 124  QISLNPELESTNGWELDPS------FSDHNNHSGSESGSRKSIEVQ--------SPAYLK 261
            ++  NP L+S + +  + S       SD N  S S  G ++ +E+Q        S     
Sbjct: 21   KLPTNPSLDSASCYPPESSSSSADRISDTNESSSSPDGFQEDVEIQILITCALNSYTQRL 80

Query: 262  SEEYRLLFRLPPDEILVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKTIPFNE 441
             ++ R LFRLP DE+L++DFNCAFQE+IL+QGHMYLFV +ICFYSNIFGFETKK IPF E
Sbjct: 81   GKKKRQLFRLPLDEVLIEDFNCAFQENILIQGHMYLFVHYICFYSNIFGFETKKIIPFRE 140

Query: 442  VTCVRKAKTAGIFPNAIEIVAGGKKNFFASFLSRDEAYRLIVDGWSQYLNGTEVLIDHQD 621
            +T VRKAKTAGIFPNAIEI  G KK FFASFLSRDEA+ LI DGW Q+  GTE ++    
Sbjct: 141  ITAVRKAKTAGIFPNAIEICVGEKKYFFASFLSRDEAFNLINDGWLQHAKGTEAIMK--- 197

Query: 622  FKSEILSESSVRVIHEKPVGSEQQTNELNPFDRNKDGDLSGDCKLLSNGED---DISVPS 792
             K + ++ESS + I    V   ++ +  +  DR+ D  +     + +N E+     ++P 
Sbjct: 198  -KQKSINESSRQEIGILGVEKAKELDPSDSSDRSMDTPILNVSVVQANVEEVNVPTTLPP 256

Query: 793  SPLEAEENGEGDAELIDNAEHLSSGKPLVWTMEDVSAPEVPDYFTKVAESKFQVQVEDFF 972
             P+ A +    +AE I +    +S + L+W  ED  AP VPDY+T+VAESKF + VEDFF
Sbjct: 257  EPIVATQ----EAEPILDIHASTSRETLMWKPEDTDAPNVPDYYTQVAESKFPINVEDFF 312

Query: 973  NLFFSDKAVTFVDTFHRICGDKDFRCTSWSAHTQFGHARELSFQHPIKFYFGAKFGHCRE 1152
            + +FSD AV FV ++H  CGDK+ +C+ W     FGH R++SFQHPIK YFGAKFG C E
Sbjct: 313  SFYFSDSAVDFVSSYHEKCGDKELKCSLWRHDDMFGHTRDVSFQHPIKIYFGAKFGGCLE 372

Query: 1153 VQRFRVYRNSHLVIETSQEIGDVPYADYFLVEGRWVVQKDV-IETNKCCILRVYVNVAFS 1329
             Q+FRVYR+SHLVIE +QE+ +VPY+DYF VE  W V+KDV  E+N CCILRVYVNVAFS
Sbjct: 373  TQKFRVYRDSHLVIEVTQEVSEVPYSDYFRVEAHWEVKKDVDDESNNCCILRVYVNVAFS 432

Query: 1330 KKTIWKGKIEQSTIEECREAYSAWLDNAHEFLKQNSLEKIDGETSAPNIIPIDAQFEECE 1509
            K+T+WKGKI QST+EECREAY  W+  A E LKQ      +G   + +    D   E+  
Sbjct: 433  KRTVWKGKIVQSTLEECREAYGLWIQMAKELLKQKLTGSEEGTRGSASQSGEDHHIEKER 492

Query: 1510 RVMSPLQRLPVTSDVLQIPSVASDTKHVNPAFENSLHGGLXXXXXXXXXXXXXXXXXXXY 1689
                 L+     +D  +       T  V+   +NS+ G                      
Sbjct: 493  NNNKSLEMSNEKNDERRSTESQYST-DVDQQAKNSIQG--VNSTSAASWLREYTKKLWIV 549

Query: 1690 LKSHNHIPXXXXXXXXXXXXMQLSIIVLLTR 1782
            L+S N++P            MQLSI++LL+R
Sbjct: 550  LRSQNYLPLALVITFAVIFLMQLSIVMLLSR 580



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +3

Query: 1917 GIGTSRNDMAEAGAWLEKRVHYLKDEMHMVEARLERMQHEHSMLKEHFKGLEQL 2078
            G+  S    ++A AWLEKR+H+LKDEM+MVEARLE M+ EH+ LK   + LE+L
Sbjct: 594  GLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKAQLRELEEL 647


>gb|ACU01863.1| vascular associated death 1 [Glycine max]
          Length = 618

 Score =  464 bits (1193), Expect = e-128
 Identities = 239/423 (56%), Positives = 301/423 (71%)
 Frame = +1

Query: 178  SFSDHNNHSGSESGSRKSIEVQSPAYLKSEEYRLLFRLPPDEILVQDFNCAFQESILLQG 357
            SF+   NH      S   I++Q+P  LKSEEYR LFRLP +E+L++DFNCA QE++L+QG
Sbjct: 36   SFNSSPNHF-----SDTEIQLQTPDVLKSEEYRQLFRLPLEEVLIEDFNCALQENLLIQG 90

Query: 358  HMYLFVRHICFYSNIFGFETKKTIPFNEVTCVRKAKTAGIFPNAIEIVAGGKKNFFASFL 537
            HMYLFV  ICFYSNIFG+ETKK IPF EVT VR+AKTAG+FPNAIEI+AG KK FFASFL
Sbjct: 91   HMYLFVNFICFYSNIFGYETKKIIPFPEVTSVRRAKTAGLFPNAIEILAGNKKYFFASFL 150

Query: 538  SRDEAYRLIVDGWSQYLNGTEVLIDHQDFKSEILSESSVRVIHEKPVGSEQQTNELNPFD 717
            SRDEA+R+I +GWS++ NG   +++ ++  SE   + +  V  E  V S   TN     +
Sbjct: 151  SRDEAFRIINEGWSRHGNGAIAIMEQKESMSESSCQENGFVAVEN-VKSSYITN-----N 204

Query: 718  RNKDGDLSGDCKLLSNGEDDISVPSSPLEAEENGEGDAELIDNAEHLSSGKPLVWTMEDV 897
             +   DLS D  L S  +D +    S  +       + EL  +A + +S     W  ED+
Sbjct: 205  GSLSTDLSKDTALPSIVDDPLLTEDSAKQCSVKQVAEPELNIDAPNAASVS-WKWNEEDI 263

Query: 898  SAPEVPDYFTKVAESKFQVQVEDFFNLFFSDKAVTFVDTFHRICGDKDFRCTSWSAHTQF 1077
             AP + + +T VA+S F ++VEDFF   FSD A+ F+++F + CGDKDFRC+SW    +F
Sbjct: 264  DAPSILEAYTCVADSVFPIKVEDFFRYLFSDDALNFLESFRQKCGDKDFRCSSWHPQEKF 323

Query: 1078 GHARELSFQHPIKFYFGAKFGHCREVQRFRVYRNSHLVIETSQEIGDVPYADYFLVEGRW 1257
            G+ARELSFQHPIK Y GAKFG C EVQ+FRVYRNSHLVIETSQE+ DVPYADYF VEG W
Sbjct: 324  GYARELSFQHPIKIYLGAKFGGCHEVQKFRVYRNSHLVIETSQEVSDVPYADYFRVEGLW 383

Query: 1258 VVQKDVIETNKCCILRVYVNVAFSKKTIWKGKIEQSTIEECREAYSAWLDNAHEFLKQNS 1437
             V++D  E+ +CC LRVYVNVAFSKKTIWKGKI QSTIEECR+AY+ W++ AHE LKQ +
Sbjct: 384  SVERDKDESKECCFLRVYVNVAFSKKTIWKGKIIQSTIEECRDAYATWINMAHEMLKQKN 443

Query: 1438 LEK 1446
            LEK
Sbjct: 444  LEK 446



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +3

Query: 1956 AWLEKRVHYLKDEMHMVEARLERMQHEHSMLKEHFKGLE 2072
            AWLEKR+H+LKDEM+MVE+RLERM++EH +LK   K LE
Sbjct: 578  AWLEKRIHHLKDEMYMVESRLERMRYEHLLLKNQLKDLE 616


>ref|XP_002892024.1| hypothetical protein ARALYDRAFT_470058 [Arabidopsis lyrata subsp.
            lyrata] gi|297337866|gb|EFH68283.1| hypothetical protein
            ARALYDRAFT_470058 [Arabidopsis lyrata subsp. lyrata]
          Length = 598

 Score =  459 bits (1181), Expect = e-126
 Identities = 246/468 (52%), Positives = 321/468 (68%), Gaps = 8/468 (1%)
 Frame = +1

Query: 130  SLNPELESTNGWELDPSFSD-----HNNHSGSESGSRKSIEVQSPAYLKSEEYRLLFRLP 294
            S +PE+ S    +L PS  +     H+  S S S SR   + QS    KSEEYR LFRLP
Sbjct: 25   SASPEVVS----DLPPSSPEGSPDRHDPSSSSPSPSRGG-DNQSEVISKSEEYRQLFRLP 79

Query: 295  PDEILVQDFNCAFQESILLQGHMYLFVRHICFYSNIFGFETKKTIPFNEVTCVRKAKTAG 474
             DEILVQDFNCA QESIL+QGHMYLF+ +ICFYSNIFG+ETKK IPF +++CV++AKTAG
Sbjct: 80   ADEILVQDFNCACQESILMQGHMYLFIHYICFYSNIFGYETKKIIPFADISCVKRAKTAG 139

Query: 475  IFPNAIEIVAGGKKNFFASFLSRDEAYRLIVDGWSQYLNGTEVLIDHQDFKSEILSESSV 654
            IFPNAIEI+AGGKK FFASFLSRDEA++LI DGW +Y +  +   + Q  + ++ ++  V
Sbjct: 140  IFPNAIEILAGGKKYFFASFLSRDEAFKLIHDGWLEYGSPVKAQGEIQVTEQQV-NDGLV 198

Query: 655  RVIHEKPVGSEQQTNELNPFDRNKDGDLSGDCKLLSNGEDDISVPSSPLEAEENGEGDAE 834
            +    + + S    NEL+   R+++  LSG   L    ++ +     P   + + E D +
Sbjct: 199  K----RALSSMDLANELDIPLRDENLHLSGISSLPVISQNGLP----PSSVQRHAEPDVD 250

Query: 835  LIDNAEHLSSGKPLVWTMEDVSAPEVPDYFTKVAESKFQVQVEDFFNLFFSDKAVTFVDT 1014
            ++       +     W  ED+ AP++   FTKVAE+KF + VE+FF LFFSD AV FV++
Sbjct: 251  VV-------AANNFNWKPEDIDAPKLSSDFTKVAEAKFSIPVEEFFRLFFSDGAVNFVES 303

Query: 1015 FHRICGDKDFRCTSWSAHTQFGHARELSFQHPIKFYFGAKFGHCREVQRFRVYRNSHLVI 1194
            FH+ CGDK+FRCTSW  H + GH R +SFQHPIK YFGAKFG C+E Q+FR+YR+SHLVI
Sbjct: 304  FHKNCGDKEFRCTSWQPHEKLGHTRNVSFQHPIKIYFGAKFGGCQESQKFRMYRDSHLVI 363

Query: 1195 ETSQEIGDVPYADYFLVEGRWVVQKDVIETNKCCILRVYVNVAFSKKTIWKGKIEQSTIE 1374
            ETSQEI DVPYADYF VEG W +++D  ++ + CIL VYVNVAF+K+T+WKGKI QST+E
Sbjct: 364  ETSQEISDVPYADYFTVEGVWDLKRDCRDSIEGCILDVYVNVAFAKRTVWKGKIVQSTLE 423

Query: 1375 ECREAYSAWLDNAHEFLKQNSLEKIDGETSAPNIIPIDAQFE---ECE 1509
            ECREAY+ W+  AHE LKQ  LE  +G     +  P+ A+ E   ECE
Sbjct: 424  ECREAYAHWIRMAHELLKQKKLENQEGNKLIEDGAPLAAKEERVSECE 471


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