BLASTX nr result

ID: Coptis25_contig00004228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004228
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275949.1| PREDICTED: uncharacterized protein LOC100247...   152   8e-40
emb|CBI24666.3| unnamed protein product [Vitis vinifera]              143   3e-37
ref|XP_004140680.1| PREDICTED: uncharacterized protein LOC101212...   145   3e-36
ref|XP_002530571.1| conserved hypothetical protein [Ricinus comm...   135   2e-34
dbj|BAC06256.1| P0696G06.13 [Oryza sativa Japonica Group]             141   2e-31

>ref|XP_002275949.1| PREDICTED: uncharacterized protein LOC100247585 [Vitis vinifera]
          Length = 232

 Score =  152 bits (383), Expect(2) = 8e-40
 Identities = 76/120 (63%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
 Frame = +1

Query: 508 QVRVDLTGKDTQKVFDDVLTNLARTAPAVPGFRRQKGGKTSNVPKDFLVKAIGEARVIKF 687
           Q+RVD+ G DTQ+VFD VLTNLAR+AP +PGFRRQKGGKTSNVPK FL++ +GE RV KF
Sbjct: 104 QLRVDVAGVDTQRVFDHVLTNLARSAPPIPGFRRQKGGKTSNVPKSFLLQILGEERVTKF 163

Query: 688 VIQEIVSMTMTEFVEEEKLNV-SKEFKTIQTPEELEQLFEPGNAFGFNATLTIEKVETEA 864
           VIQEI++ T++++V +E LNV  K+  T    EEL+ LF PGN F FNATL +EK E+EA
Sbjct: 164 VIQEIITATVSDYVMKENLNVKDKKITTTPAAEELKSLFTPGNEFRFNATLELEKSESEA 223



 Score = 38.9 bits (89), Expect(2) = 8e-40
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = +3

Query: 336 HGRGLTGLSQPIYAVNNPDLDTSVTNMKDIGVTLRKAKVVVESSNDDTIQ 485
           H   L  LS+PI AV +     S+ + KD  +T++ AK+VVES  DD IQ
Sbjct: 56  HQGSLRFLSKPISAVGSGS-KASIIDPKDNDITIKNAKIVVESQEDDEIQ 104


>emb|CBI24666.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  143 bits (360), Expect(2) = 3e-37
 Identities = 72/120 (60%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = +1

Query: 508 QVRVDLTGKDTQKVFDDVLTNLARTAPAVPGFRRQKGGKTSNVPKDFLVKAIGEARVIKF 687
           Q+RVD+ G DTQ+VFD VLTNLAR+AP +PGFRRQKGG +  VPK FL++ +GE RV KF
Sbjct: 312 QLRVDVAGVDTQRVFDHVLTNLARSAPPIPGFRRQKGGNSLYVPKSFLLQILGEERVTKF 371

Query: 688 VIQEIVSMTMTEFVEEEKLNV-SKEFKTIQTPEELEQLFEPGNAFGFNATLTIEKVETEA 864
           VIQEI++ T++++V +E LNV  K+  T    EEL+ LF PGN F FNATL +EK E+EA
Sbjct: 372 VIQEIITATVSDYVMKENLNVKDKKITTTPAAEELKSLFTPGNEFRFNATLELEKSESEA 431



 Score = 38.9 bits (89), Expect(2) = 3e-37
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = +3

Query: 336 HGRGLTGLSQPIYAVNNPDLDTSVTNMKDIGVTLRKAKVVVESSNDDTIQ 485
           H   L  LS+PI AV +     S+ + KD  +T++ AK+VVES  DD IQ
Sbjct: 264 HQGSLRFLSKPISAVGSGS-KASIIDPKDNDITIKNAKIVVESQEDDEIQ 312


>ref|XP_004140680.1| PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus]
          Length = 247

 Score =  145 bits (365), Expect(2) = 3e-36
 Identities = 70/114 (61%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +1

Query: 508 QVRVDLTGKDTQKVFDDVLTNLARTAPAVPGFRRQKGGKTSNVPKDFLVKAIGEARVIKF 687
           Q+RVDLTG +TQKVFD VLTNLAR+AP +PGFR+QKGGKTSNVPK FL++ +G+ RV KF
Sbjct: 127 QLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF 186

Query: 688 VIQEIVSMTMTEFVEEEKLNV-SKEFKTIQTPEELEQLFEPGNAFGFNATLTIE 846
           +IQEI++ TM ++ ++E +NV  K+  T QT +EL+ LF PG  FGFNA L +E
Sbjct: 187 IIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELE 240



 Score = 33.9 bits (76), Expect(2) = 3e-36
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = +3

Query: 336 HGRGLTGLSQPIYAVNNPDLDTSVTNMKDIGVTLRKAKVVVESSNDDTIQ 485
           H  G   LS+P  ++ +  L+ ++T+ K   +TL+ AKVVVES  ++ IQ
Sbjct: 79  HKIGSRFLSKPT-SIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQ 127


>ref|XP_002530571.1| conserved hypothetical protein [Ricinus communis]
           gi|223529870|gb|EEF31801.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score =  135 bits (341), Expect(2) = 2e-34
 Identities = 67/119 (56%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
 Frame = +1

Query: 508 QVRVDLTGKDTQKVFDDVLTNLARTAPAVPGFRRQKGGKTSNVPKDFLVKAIGEARVIKF 687
           Q+RVDL+G +T+ VF  VL NLARTAP +PGFRR+KGG    VP+DFL++ +GE RV KF
Sbjct: 95  QLRVDLSGDETEIVFSKVLANLARTAPPIPGFRREKGGDFRLVPRDFLLQILGEERVTKF 154

Query: 688 VIQEIVSMTMTEFVEEEKLNVSK-EFKTIQTPEELEQLFEPGNAFGFNATLTIEKVETE 861
           VIQEIVS ++ ++V++E LNV + +  T+Q  +EL++LF PGN FGFNA L +E+ +TE
Sbjct: 155 VIQEIVSSSVADYVKKENLNVKENKVNTVQEADELKKLFIPGNDFGFNAVLELEETKTE 213



 Score = 37.4 bits (85), Expect(2) = 2e-34
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +3

Query: 342 RGLTGLSQPIYAVNNPDLDTSVTNMKDIGVTLRKAKVVVESSNDDTIQ 485
           R L  + +PI AV +  L+T+ T+ KD  +TL+ AKVVVES  ++ IQ
Sbjct: 49  RVLEHVFKPISAVGS-GLETTFTDPKDNAITLKNAKVVVESMQENKIQ 95


>dbj|BAC06256.1| P0696G06.13 [Oryza sativa Japonica Group]
          Length = 356

 Score =  141 bits (356), Expect = 2e-31
 Identities = 67/118 (56%), Positives = 92/118 (77%)
 Frame = +1

Query: 508 QVRVDLTGKDTQKVFDDVLTNLARTAPAVPGFRRQKGGKTSNVPKDFLVKAIGEARVIKF 687
           QVRVDL GK TQKVFD+ LT+LAR AP VPGFR+ KGG+TSN+P   L++ +G++RV KF
Sbjct: 223 QVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKSKGGRTSNIPSSILLQMLGKSRVTKF 282

Query: 688 VIQEIVSMTMTEFVEEEKLNVSKEFKTIQTPEELEQLFEPGNAFGFNATLTIEKVETE 861
           V+QEI+S+T+ +FV++E L V+ E KT Q+ EELE  F PG++F F+  L +EK E++
Sbjct: 283 VLQEILSITVGDFVKKENLKVNPEIKTTQSEEELESSFTPGSSFSFSVVLQLEKPESD 340


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