BLASTX nr result

ID: Coptis25_contig00004220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004220
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284515.1| PREDICTED: nudix hydrolase 9-like [Vitis vin...   149   2e-34
emb|CBI16205.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002875774.1| hypothetical protein ARALYDRAFT_484997 [Arab...   148   5e-34
dbj|BAK07137.1| predicted protein [Hordeum vulgare subsp. vulgare]    146   1e-33
ref|XP_002313456.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33

>ref|XP_002284515.1| PREDICTED: nudix hydrolase 9-like [Vitis vinifera]
          Length = 301

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/122 (57%), Positives = 92/122 (75%)
 Frame = +2

Query: 26  MEKPEEMEAAVSRPYSYTLLLKCPVGLSPSQVSVDFSPSYDRNPHPDVNLEDSISQTWNR 205
           MEK   M  A ++   Y LLL CP GLSPSQVSVDFS  +DR PHPD++L++SIS+ W+ 
Sbjct: 1   MEKA--MADAEAKVPDYRLLLSCPSGLSPSQVSVDFSERFDRIPHPDISLDNSISEIWDG 58

Query: 206 RIEETPSLFNGTKFRYGGYALHNPDGTSQKSQLCLRLGLTDYRTFMGTNLSKEWERFLIH 385
           R+++  SL+NGTKFRY G+ +H   G+ +KS +CL LGLTDYRTF+GTNL+  WE+FL+ 
Sbjct: 59  RVQQNASLYNGTKFRYAGHIMHGGGGSDEKSHVCLHLGLTDYRTFVGTNLNPLWEKFLVP 118

Query: 386 SE 391
           SE
Sbjct: 119 SE 120


>emb|CBI16205.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/116 (57%), Positives = 89/116 (76%)
 Frame = +2

Query: 44  MEAAVSRPYSYTLLLKCPVGLSPSQVSVDFSPSYDRNPHPDVNLEDSISQTWNRRIEETP 223
           M  A ++   Y LLL CP GLSPSQVSVDFS  +DR PHPD++L++SIS+ W+ R+++  
Sbjct: 1   MADAEAKVPDYRLLLSCPSGLSPSQVSVDFSERFDRIPHPDISLDNSISEIWDGRVQQNA 60

Query: 224 SLFNGTKFRYGGYALHNPDGTSQKSQLCLRLGLTDYRTFMGTNLSKEWERFLIHSE 391
           SL+NGTKFRY G+ +H   G+ +KS +CL LGLTDYRTF+GTNL+  WE+FL+ SE
Sbjct: 61  SLYNGTKFRYAGHIMHGGGGSDEKSHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSE 116


>ref|XP_002875774.1| hypothetical protein ARALYDRAFT_484997 [Arabidopsis lyrata subsp.
           lyrata] gi|297321612|gb|EFH52033.1| hypothetical protein
           ARALYDRAFT_484997 [Arabidopsis lyrata subsp. lyrata]
          Length = 303

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/119 (63%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
 Frame = +2

Query: 38  EEMEAAVSRPYSYTLLLKCPVGLSPSQVSVDFSPSYDRNPHPDVNLEDSISQTWNRRIEE 217
           +EM    SR   Y LLL CP GLSPSQVSVDFS S+DR PHPD +LEDSISQ W +R + 
Sbjct: 6   QEMNPEGSR---YQLLLSCPSGLSPSQVSVDFSKSHDRIPHPDPDLEDSISQVWEQRSQS 62

Query: 218 TPSLFNGTKFRYGGYALHNPD-GTSQKSQLCLRLGLTDYRTFMGTNLSKEWERFLIHSE 391
             SLFNG KFRYG Y L   D G ++   +CLRLGLTDYRTF+GTNLS  WERFL+ SE
Sbjct: 63  NSSLFNGQKFRYGSYCLGGDDGGANEVPHVCLRLGLTDYRTFVGTNLSSLWERFLVPSE 121


>dbj|BAK07137.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 300

 Score =  146 bits (369), Expect = 1e-33
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 50  AAVSRPYSYTLLLKCPVGLSPSQVSVDFSPSYDRNPHPDVNLEDSISQTWNRRIEETPSL 229
           A+ +    Y LLL CP GL  S+VSV F PS+DR PHPD +LE+S+ + WN+R+++ PSL
Sbjct: 7   ASTAAGTGYKLLLSCPEGLPRSRVSVRFDPSFDRTPHPDASLEESMCEIWNQRLQQNPSL 66

Query: 230 FNGTKFRYGGYALHNPDGTSQKSQLCLRLGLTDYRTFMGTNLSKEWERFLIHSE 391
           +NGTKFRYGG+ALH+ D +SQ+  + L LGLTDYRTF+GTN+S  WE+FL+ SE
Sbjct: 67  YNGTKFRYGGHALHHSDESSQEYCVSLHLGLTDYRTFVGTNMSPLWEKFLVSSE 120


>ref|XP_002313456.1| predicted protein [Populus trichocarpa] gi|222849864|gb|EEE87411.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  146 bits (369), Expect = 1e-33
 Identities = 67/107 (62%), Positives = 83/107 (77%)
 Frame = +2

Query: 71  SYTLLLKCPVGLSPSQVSVDFSPSYDRNPHPDVNLEDSISQTWNRRIEETPSLFNGTKFR 250
           +Y L+L CP GLSPSQVSV F PSYDR  HPD+ LE+SIS+ W++R+++  SLFNG KFR
Sbjct: 5   NYELVLSCPSGLSPSQVSVVFDPSYDRIAHPDIELENSISEIWDQRVQKNASLFNGKKFR 64

Query: 251 YGGYALHNPDGTSQKSQLCLRLGLTDYRTFMGTNLSKEWERFLIHSE 391
           YGGY L N  G+ Q   +CL LGLTDYRTF+GTNL+  WE+FL+ SE
Sbjct: 65  YGGYTLCNRGGSQQDFHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSE 111


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