BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004218
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   128   5e-28
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...   127   1e-27
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   121   7e-26
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   120   9e-26

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/129 (46%), Positives = 85/129 (65%)
 Frame = +2

Query: 53   PVRYLGLPLVFARLGIRECQPLVEKVTSKITNWKSRLLSHAGRLQLIVSVLLSFYTYWAR 232
            PVRYLGLPL+  RL   +C PL+E+V  +I +W SR LS+AGRL LI SVL S   +W  
Sbjct: 768  PVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLA 827

Query: 233  SFISPNIVLEQIEKTCAQFLWMGTIMKKGHHQASWSTVCQPKDEGGLGVMNLQQWNIGAY 412
            +F  P   + ++EK C+ FLW GT M     + SW  VC+PKDEGGLG+ +L++ N    
Sbjct: 828  AFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCC 887

Query: 413  CELIFKLIT 439
             +L++K+++
Sbjct: 888  LKLVWKIVS 896


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/143 (42%), Positives = 89/143 (62%)
 Frame = +2

Query: 8   AQALAAILGVELIKPPVRYLGLPLVFARLGIRECQPLVEKVTSKITNWKSRLLSHAGRLQ 187
           A  LAA +G  +   PVRYLGLPL+F RL   +C PL++++TS+I +W +R+LS AGRLQ
Sbjct: 20  ASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLSFAGRLQ 79

Query: 188 LIVSVLLSFYTYWARSFISPNIVLEQIEKTCAQFLWMGTIMKKGHHQASWSTVCQPKDEG 367
           L+ SVL S   YWA  F+ P  V   ++K    +LW G    +G  + +W  VC P DEG
Sbjct: 80  LVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEG 139

Query: 368 GLGVMNLQQWNIGAYCELIFKLI 436
           GL + +   WNI +  ++++ L+
Sbjct: 140 GLAIRDGSSWNIASTLKILWLLL 162


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/143 (40%), Positives = 91/143 (63%)
 Frame = +2

Query: 5   DAQALAAILGVELIKPPVRYLGLPLVFARLGIRECQPLVEKVTSKITNWKSRLLSHAGRL 184
           + + +  ILG    + P++YLG+PL+ +RL    C+ LV+++TSK+ +W  R LS+AGR+
Sbjct: 39  EREQIIHILGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRTLSYAGRV 98

Query: 185 QLIVSVLLSFYTYWARSFISPNIVLEQIEKTCAQFLWMGTIMKKGHHQASWSTVCQPKDE 364
           QLI SVL S   YWA  F+ P  V++ +E+    FLW G+ M+    + +W  VC PK E
Sbjct: 99  QLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKE 158

Query: 365 GGLGVMNLQQWNIGAYCELIFKL 433
           GGLG+ ++++WN  A  + I+ L
Sbjct: 159 GGLGIKSIKEWNKIALLKHIWNL 181


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/143 (42%), Positives = 89/143 (62%)
 Frame = +2

Query: 11   QALAAILGVELIKPPVRYLGLPLVFARLGIRECQPLVEKVTSKITNWKSRLLSHAGRLQL 190
            ++LA  LG+     PVRYLG+PL+  ++  ++ QPLV+++ S+ T+W +R LS AGRLQL
Sbjct: 748  RSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQL 807

Query: 191  IVSVLLSFYTYWARSFISPNIVLEQIEKTCAQFLWMGTIMKKGHHQASWSTVCQPKDEGG 370
            + SV+ S   +WA  FI PN  L+++E+ C  FLW G        + SW+ VC PK+ GG
Sbjct: 808  LKSVIYSTINFWASVFIFPNQCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSPKEAGG 867

Query: 371  LGVMNLQQWNIGAYCELIFKLIT 439
            LG+  L  WN     +LI+ L T
Sbjct: 868  LGLKRLSSWNRILALKLIWLLFT 890


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/129 (44%), Positives = 86/129 (66%)
 Frame = +2

Query: 53   PVRYLGLPLVFARLGIRECQPLVEKVTSKITNWKSRLLSHAGRLQLIVSVLLSFYTYWAR 232
            PVRYLGLPL+  R+ + +C PL+EK+ S+I++WK+R LS+AGRLQL+ SV+ S   +W  
Sbjct: 1023 PVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWIS 1082

Query: 233  SFISPNIVLEQIEKTCAQFLWMGTIMKKGHHQASWSTVCQPKDEGGLGVMNLQQWNIGAY 412
            +F  P   + +IE+  A FLW GT +     + +W  VC+PK EGGLG+ +L   N    
Sbjct: 1083 AFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVDANKICC 1142

Query: 413  CELIFKLIT 439
             +LI++L++
Sbjct: 1143 FKLIWRLVS 1151