BLASTX nr result

ID: Coptis25_contig00004206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004206
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276822.1| PREDICTED: uncharacterized protein LOC100264...   212   1e-52
ref|XP_002326296.1| predicted protein [Populus trichocarpa] gi|1...   211   3e-52
emb|CAN80273.1| hypothetical protein VITISV_039443 [Vitis vinifera]   210   4e-52
ref|XP_002516241.1| conserved hypothetical protein [Ricinus comm...   197   3e-48
gb|ACU19553.1| unknown [Glycine max]                                  193   6e-47

>ref|XP_002276822.1| PREDICTED: uncharacterized protein LOC100264520 [Vitis vinifera]
           gi|297738529|emb|CBI27774.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  212 bits (540), Expect = 1e-52
 Identities = 128/254 (50%), Positives = 156/254 (61%), Gaps = 5/254 (1%)
 Frame = +1

Query: 130 MLGKRTRPATIGKFPDPLMSSGRFGYPETITSPKCSLEFRILSPRTLKNSDPVAGVGLGI 309
           MLGK +RPA IGK    L+S       +  TSP+  L+ +I SPR  KN D  +GVGLGI
Sbjct: 1   MLGKTSRPA-IGKLAGSLISGNCTAILDVATSPRSPLDMKIQSPRGQKNYDLFSGVGLGI 59

Query: 310 VAALEKSSS---DVLVKTMVDGSNL-RSNPIPINGSTKIYSKCEQSHPQEVESRVECMES 477
           VAAL+KSS+   ++L K  V G+N+ RS P+P+         C +      E  ++ +E 
Sbjct: 60  VAALDKSSNCRGEILAKYAVSGTNMGRSGPVPVTSG----KNCGRLKVGFGELEMDSLED 115

Query: 478 YTYVTSHKHNKPT-TKTYCDKGVETGAGHDRNCREDMRSRKVAVFCESPPRTLEVKTAFP 654
           YTYVT HK NK + T+ Y D G ET A H                 ESP R      AFP
Sbjct: 116 YTYVTCHKPNKKSFTRVYFD-GHETTAFHKH---------------ESPARFSNDVQAFP 159

Query: 655 TLDFLSSCYLCRKKLHGIDIYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRTADVSS 834
           T DFLSSC+LCRK LHG DIYMYRGEKAFCS ECR RQI +DERKE+C SE SR+ADVSS
Sbjct: 160 TSDFLSSCHLCRKNLHGKDIYMYRGEKAFCSNECRSRQIVMDERKEQCRSEASRSADVSS 219

Query: 835 SPYTRDNLFFTGVI 876
           SPYTR  +F TG++
Sbjct: 220 SPYTRGQIFSTGIL 233


>ref|XP_002326296.1| predicted protein [Populus trichocarpa] gi|118481936|gb|ABK92901.1|
           unknown [Populus trichocarpa]
           gi|222833489|gb|EEE71966.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  211 bits (536), Expect = 3e-52
 Identities = 126/255 (49%), Positives = 159/255 (62%), Gaps = 6/255 (2%)
 Frame = +1

Query: 130 MLGKRTRPATIGKFPDPLMSSGRFGYPETITSPKCSLEFRILSPRTLKNSDPVAGVGLGI 309
           MLGKRT P  IG+  + L+S  R  + +  TSP+  L++   SP+ LKN   + GVGLGI
Sbjct: 1   MLGKRTNPM-IGRLSELLVSGTRAKFMDANTSPRSPLDYMNQSPKGLKNYHDLGGVGLGI 59

Query: 310 VAALEKSSS-----DVLVKTMVDGSNL-RSNPIPINGSTKIYSKCEQSHPQEVESRVECM 471
           VAAL+K S+     +VL K  V  SNL RSNPIP+N        CE  +    E  ++ +
Sbjct: 60  VAALDKPSNTDVGHEVLAKYAVCRSNLNRSNPIPVNSG----KDCEIFNCGFEEMDMKSL 115

Query: 472 ESYTYVTSHKHNKPTTKTYCDKGVETGAGHDRNCREDMRSRKVAVFCESPPRTLEVKTAF 651
           E YTYVT H  N+  TK Y D G     GHDR C E+M    V      P R +E    +
Sbjct: 116 EDYTYVTIHAPNQSFTKVYYDGGEYGKQGHDRRC-ENMGCTSVPK--GFPARLVEDVPVY 172

Query: 652 PTLDFLSSCYLCRKKLHGIDIYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRTADVS 831
           PT DFLSSC+LCRKKL+G DIY+YRGEKAFCS ECR  QI IDERKE+C SE++R+ADVS
Sbjct: 173 PTSDFLSSCHLCRKKLYGRDIYIYRGEKAFCSVECRSSQIMIDERKEQCRSEVARSADVS 232

Query: 832 SSPYTRDNLFFTGVI 876
           SSP+    +F TG++
Sbjct: 233 SSPFKTSPIFSTGIL 247


>emb|CAN80273.1| hypothetical protein VITISV_039443 [Vitis vinifera]
          Length = 235

 Score =  210 bits (535), Expect = 4e-52
 Identities = 125/253 (49%), Positives = 151/253 (59%), Gaps = 4/253 (1%)
 Frame = +1

Query: 130 MLGKRTRPATIGKFPDPLMSSGRFGYPETITSPKCSLEFRILSPRTLKNSDPVAGVGLGI 309
           MLGK +RPA IGK    L+S       +  TSP+  L+ +I SPR  KN D   GVGLGI
Sbjct: 1   MLGKTSRPA-IGKLAGSLISGNCTAILDVATSPRSPLDMKIQSPRGQKNYDLFXGVGLGI 59

Query: 310 VAALEKSSS---DVLVKTMVDGSNL-RSNPIPINGSTKIYSKCEQSHPQEVESRVECMES 477
           VAAL+KSS+   ++L K  V G+NL RS P+P+         C +      E  ++ +E 
Sbjct: 60  VAALDKSSNCGGEILAKYAVSGTNLGRSGPVPVTSG----KNCGRLKVGFGELEMDSLED 115

Query: 478 YTYVTSHKHNKPTTKTYCDKGVETGAGHDRNCREDMRSRKVAVFCESPPRTLEVKTAFPT 657
           YTYVT HK NK +       G ET A H                 ESP R  +   AFPT
Sbjct: 116 YTYVTCHKPNKKSFTRVYFNGHETTAFHKH---------------ESPARFSDDMQAFPT 160

Query: 658 LDFLSSCYLCRKKLHGIDIYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRTADVSSS 837
            DFLSSC+LCRK LHG DIYMYRGEKAFCS ECR RQI +DERKE+C SE SR+ DVSSS
Sbjct: 161 SDFLSSCHLCRKNLHGKDIYMYRGEKAFCSNECRSRQIVMDERKEQCRSEASRSVDVSSS 220

Query: 838 PYTRDNLFFTGVI 876
           PYTR  +F TG++
Sbjct: 221 PYTRGQIFSTGIL 233


>ref|XP_002516241.1| conserved hypothetical protein [Ricinus communis]
           gi|223544727|gb|EEF46243.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score =  197 bits (502), Expect = 3e-48
 Identities = 130/270 (48%), Positives = 166/270 (61%), Gaps = 21/270 (7%)
 Frame = +1

Query: 130 MLGKRTRPATIGKFPDPLMSSGRF-GYPETIT--SPKCSLEFRILSPRTLKNSDPVAGVG 300
           MLGKRT P  IG+  + L+S  R  G+ +  T  SP+  L++RI SPR LKN D + GVG
Sbjct: 1   MLGKRTNPM-IGRLSELLVSGNRAAGFLDVATAPSPRSPLDYRIQSPRGLKNYD-LGGVG 58

Query: 301 LGIVAALEKS---SSD-------VLVKTMV---DGSNLRSNPIPINGSTKIYSKCEQSHP 441
           LGIVAALEKS   SSD       +L K  +     +  RS+PIP+     +       H 
Sbjct: 59  LGIVAALEKSTYSSSDGTSSGHEILAKYAILCSSNNTTRSDPIPVKIGLSL-------HK 111

Query: 442 QEVESRVECMESYTYVTSH-KHNKPTTKTYCDKGVETGAGHDR---NCREDMRSRKVAVF 609
           + +E  ++ ++ YTYVT+H   NK  TK Y D G +   GH R   +   D     V+V 
Sbjct: 112 EMLE--IDSLDDYTYVTTHGPDNKSMTKVYYDHGQK---GHRRIGFDSTTDNSFGVVSVI 166

Query: 610 CESP-PRTLEVKTAFPTLDFLSSCYLCRKKLHGIDIYMYRGEKAFCSAECRCRQIAIDER 786
            E+P P     + A+PT DFLSSC+LC+KKLHG DIYMYRGEKAFCSAECR RQI IDER
Sbjct: 167 KETPAPARFVDEVAYPTSDFLSSCHLCKKKLHGKDIYMYRGEKAFCSAECRSRQIMIDER 226

Query: 787 KEKCGSELSRTADVSSSPYTRDNLFFTGVI 876
           KE+C SE+ R+ADVSSSPYT   +F  G++
Sbjct: 227 KEQCRSEVQRSADVSSSPYTTSPIFSAGIL 256


>gb|ACU19553.1| unknown [Glycine max]
          Length = 238

 Score =  193 bits (491), Expect = 6e-47
 Identities = 124/259 (47%), Positives = 160/259 (61%), Gaps = 10/259 (3%)
 Frame = +1

Query: 130 MLGKRTRPATIGKFPDPLMSSGR-FGYPETITSPKCSLEFRIL--SPRTLKNSDPVAGVG 300
           MLGKR RP  IGK  + L+S GR   Y +T  SP+  L+ +++  SPR LKN D + GVG
Sbjct: 1   MLGKRPRPM-IGKLSELLVSRGRTVAYLDTTGSPRGPLDMKMMQSSPRGLKNYD-LGGVG 58

Query: 301 LGIVAALEKSSS----DVLVKTMVDGSNL-RSNPIPINGSTKIYSKCEQSHPQEVESRVE 465
           LGIV AL+KS+     +VL K  V  SNL RS PIP++     Y+K    +P E +    
Sbjct: 59  LGIVVALDKSNEVAAREVLPKHAVCTSNLNRSGPIPVH-----YTK----NPDEFD---- 105

Query: 466 CMESYTYVTSHKHNKPTTKTYCDKGVETGAGHDRNCREDMRSRKVAVFCESPPRTL--EV 639
            +E YTYVT H  NK  TK Y D G       +   R    +  V V   + P+ L  E 
Sbjct: 106 -VEEYTYVTCHVPNKTFTKVYYDGG-------EGEIRRHYNNSNVGVLRRTAPQPLIVEA 157

Query: 640 KTAFPTLDFLSSCYLCRKKLHGIDIYMYRGEKAFCSAECRCRQIAIDERKEKCGSELSRT 819
           ++ +PT +FLSSC+LC KKLHG DIYMYRGEKAFCS ECR  QI +DERKE+C SE SR+
Sbjct: 158 ESLYPTSNFLSSCHLCGKKLHGKDIYMYRGEKAFCSPECRSSQIMMDERKERCRSEASRS 217

Query: 820 ADVSSSPYTRDNLFFTGVI 876
            ++SSSPY R+ +F TG++
Sbjct: 218 VEMSSSPYAREQIFSTGIL 236


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