BLASTX nr result

ID: Coptis25_contig00004204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004204
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282387.1| PREDICTED: uncharacterized protein LOC100268...   147   3e-33
ref|XP_002312394.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|XP_002314864.1| predicted protein [Populus trichocarpa] gi|1...   135   2e-29
emb|CBI27029.3| unnamed protein product [Vitis vinifera]              132   1e-28
ref|XP_004135103.1| PREDICTED: uncharacterized protein LOC101221...   130   4e-28

>ref|XP_002282387.1| PREDICTED: uncharacterized protein LOC100268142 [Vitis vinifera]
           gi|147863608|emb|CAN79760.1| hypothetical protein
           VITISV_025473 [Vitis vinifera]
          Length = 192

 Score =  147 bits (371), Expect = 3e-33
 Identities = 89/191 (46%), Positives = 115/191 (60%), Gaps = 13/191 (6%)
 Frame = +1

Query: 187 KKRVRXXXXXXXXXXVVAKRFRDDLLEILDDSEV----NTATQDLASVMKSFEEEISI-- 348
           +KRVR             KR RDDLL ILDDS+     + AT DLASVMK FEE+IS   
Sbjct: 7   RKRVRDDSDEFELDSPEVKRLRDDLLCILDDSDPLADKDPATHDLASVMKIFEEQISASP 66

Query: 349 PNPSNNTDLTSESGESQPELGYLFEASDDELGLPPAFSGXXXXXXXXNLKKEENDVISVP 528
           P P    DLTS+SGESQP++ +L EASDDELGLPP++S          LK E+   + + 
Sbjct: 67  PRPVPVVDLTSDSGESQPDISFLLEASDDELGLPPSWSS-----SSEELKSEDAKFVQIS 121

Query: 529 SFAVGLDQIWKFEDEISSYDEFAI-------CGDENSEFLALDGLFDYSDMYNGHSDFSD 687
           + + GL + W F DEI SYD F           +   E++AL+GLFD+SD+  G +DFS+
Sbjct: 122 TESSGLSEFWGFGDEIPSYDSFEFGFGETHTVANNYGEYVALEGLFDHSDISFGSTDFSE 181

Query: 688 FSYRVESLHAL 720
           FS+R E+L AL
Sbjct: 182 FSWRHETLPAL 192


>ref|XP_002312394.1| predicted protein [Populus trichocarpa] gi|222852214|gb|EEE89761.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  141 bits (355), Expect = 2e-31
 Identities = 87/190 (45%), Positives = 115/190 (60%), Gaps = 6/190 (3%)
 Frame = +1

Query: 166 MAQLVNEKKRVRXXXXXXXXXXVVAKRFRDDLLEILDDSEVNTATQDLASVMKSFEEEIS 345
           M +L+N KKRVR             K+ RDDL  +LDDS+ ++  QDL SVMKSFE+EIS
Sbjct: 1   MEELLNHKKRVRDGSDESDLDFPEVKKIRDDLFGLLDDSDPDSLGQDLDSVMKSFEQEIS 60

Query: 346 IPN--PSNNTDLTSESGESQPELGYLFEASDDELGLPPAFSGXXXXXXXXNLKKEENDVI 519
             +  P    DLTSESGESQP+LG+L EASDDELGLPP+            ++ E   V 
Sbjct: 61  ASSSSPVPVVDLTSESGESQPDLGFLLEASDDELGLPPSSINLSSGEVKGGVETELARVD 120

Query: 520 SVPSFAVGLDQIWKFEDEISSYDEFAI-CGDEN--SEFLAL-DGLFDYSDMYNGHSDFSD 687
           S  S  VG  ++W FED+I +YD F +  GD N  S+++   D LF+YS++    SDFSD
Sbjct: 121 SAQSSGVG-GELWGFEDQIPTYDSFGLGVGDSNYSSDYVGFDDSLFEYSNVCFDSSDFSD 179

Query: 688 FSYRVESLHA 717
            S+R+  + A
Sbjct: 180 LSWRLGGMPA 189


>ref|XP_002314864.1| predicted protein [Populus trichocarpa] gi|118482034|gb|ABK92948.1|
           unknown [Populus trichocarpa]
           gi|222863904|gb|EEF01035.1| predicted protein [Populus
           trichocarpa]
          Length = 189

 Score =  135 bits (339), Expect = 2e-29
 Identities = 85/193 (44%), Positives = 115/193 (59%), Gaps = 9/193 (4%)
 Frame = +1

Query: 166 MAQLVNEKKRVRXXXXXXXXXXVVAKRFRDDLLEILDDSEVNTATQDLASVMKSFEEEIS 345
           M +L N KKRVR             K+ R+DLL I+DDS+ ++  QDL SVMKSFE+EIS
Sbjct: 1   MEELQNNKKRVRDDSFELELDLPEVKKIREDLLGIIDDSDPDSLGQDLDSVMKSFEQEIS 60

Query: 346 I--PNPSNNTDLTSESGESQPELGYLFEASDDELGLPPAFSGXXXXXXXXNLKKEENDVI 519
               +P    DLTSESGES+P+LGYL EASDDELGLPP+ +            +EE +++
Sbjct: 61  AYSSSPVPVVDLTSESGESRPDLGYLLEASDDELGLPPSMNSSRGEVKG----EEETELV 116

Query: 520 ---SVPSFAVGLDQIWKFEDEISSYDEFAICG---DENSEFLAL-DGLFDYSDMYNGHSD 678
              S  S  +G  +IW FED+I +YD F +     D NS ++A  DGLF+YS+     ++
Sbjct: 117 RVDSAESSGIG-GEIWGFEDQIPTYDSFGLGAGDVDYNSRYVAFDDGLFEYSNACFDSTE 175

Query: 679 FSDFSYRVESLHA 717
           F D S+R   + A
Sbjct: 176 FVDLSWRFGGMPA 188


>emb|CBI27029.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  132 bits (332), Expect = 1e-28
 Identities = 85/191 (44%), Positives = 105/191 (54%), Gaps = 13/191 (6%)
 Frame = +1

Query: 187 KKRVRXXXXXXXXXXVVAKRFRDDLLEILDDSEV----NTATQDLASVMKSFEEEISI-- 348
           +KRVR             KR RDDLL ILDDS+     + AT DLASVMK FEE+IS   
Sbjct: 27  RKRVRDDSDEFELDSPEVKRLRDDLLCILDDSDPLADKDPATHDLASVMKIFEEQISASP 86

Query: 349 PNPSNNTDLTSESGESQPELGYLFEASDDELGLPPAFSGXXXXXXXXNLKKEENDVISVP 528
           P P    DLTS+SGESQP++ +L EASDDELGLPP                         
Sbjct: 87  PRPVPVVDLTSDSGESQPDISFLLEASDDELGLPP------------------------- 121

Query: 529 SFAVGLDQIWKFEDEISSYDEFAI-------CGDENSEFLALDGLFDYSDMYNGHSDFSD 687
             + GL + W F DEI SYD F           +   E++AL+GLFD+SD+  G +DFS+
Sbjct: 122 --SCGLSEFWGFGDEIPSYDSFEFGFGETHTVANNYGEYVALEGLFDHSDISFGSTDFSE 179

Query: 688 FSYRVESLHAL 720
           FS+R E+L AL
Sbjct: 180 FSWRHETLPAL 190


>ref|XP_004135103.1| PREDICTED: uncharacterized protein LOC101221594 [Cucumis sativus]
           gi|449518386|ref|XP_004166223.1| PREDICTED:
           uncharacterized protein LOC101229322 [Cucumis sativus]
          Length = 178

 Score =  130 bits (327), Expect = 4e-28
 Identities = 78/187 (41%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
 Frame = +1

Query: 181 NEKKRVRXXXXXXXXXXVVAKRFRDDLLEILDDSEVNTATQDLASVMKSFEEEISIPN-- 354
           N KKR R             KR RDDLL   DDS+    TQDL S+M+SFEEEI+  +  
Sbjct: 5   NSKKRDRDDSAESETGSPEVKRLRDDLLGFFDDSDPEPPTQDLDSLMRSFEEEIATASSS 64

Query: 355 PSNNTDLTSESGESQPELGYLFEASDDELGLPPAFSGXXXXXXXXNLKKEENDVISVPSF 534
           P    DLT++S +SQPELGYL EASDDELGLPP+ S              + D   + + 
Sbjct: 65  PVPVVDLTADSADSQPELGYLLEASDDELGLPPSNS--------------QQDFARISTD 110

Query: 535 AVGLDQIWKFEDEISSYDEFAI------CGDENSEFLALDGLFDYSDMYNGHSDFSDFSY 696
           +  + ++W+F D+I +YD F +       G + +E++A DGL +YS++    SD SDF +
Sbjct: 111 SSDIGEMWRFVDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLEYSNLCFDASDNSDFLW 170

Query: 697 RVESLHA 717
           R ESL A
Sbjct: 171 RQESLPA 177


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