BLASTX nr result

ID: Coptis25_contig00004171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004171
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284734.1| PREDICTED: uncharacterized protein LOC100260...   208   2e-51
ref|NP_001238493.1| uncharacterized protein LOC100305647 precurs...   207   3e-51
ref|NP_001238205.1| uncharacterized protein LOC100499677 precurs...   202   9e-50
ref|XP_004141234.1| PREDICTED: uncharacterized protein LOC101208...   200   6e-49
gb|AAR07596.1| fiber protein Fb34 [Gossypium barbadense]              199   7e-49

>ref|XP_002284734.1| PREDICTED: uncharacterized protein LOC100260721 isoform 2 [Vitis
           vinifera] gi|302143046|emb|CBI20341.3| unnamed protein
           product [Vitis vinifera]
          Length = 185

 Score =  208 bits (530), Expect = 2e-51
 Identities = 114/197 (57%), Positives = 126/197 (63%), Gaps = 2/197 (1%)
 Frame = -2

Query: 858 LVFVFILDLVAFGLAVAAEQRRSTANIVTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 679
           LV V I D++AFGLAVAAEQRRSTA +VTDS                             
Sbjct: 7   LVVVLIFDVIAFGLAVAAEQRRSTAQVVTDSEDNYKYCVYDSDISTGLG----------- 55

Query: 678 XXXXXXXVGSFLFLLAGQLLIMVASKCFCCGRALRPGGSRALAIILFIACWVTFFIAEVC 499
                  VG+ LFL A Q +IMVAS+CFCCG+AL PGGSRA A+ILFI CWVTF IAE+C
Sbjct: 56  -------VGALLFLFASQAIIMVASRCFCCGKALNPGGSRAWAVILFITCWVTFLIAEIC 108

Query: 498 LLAGSVRNAYHTKYNTIFGEDPPSCETVRKXXXXXXXXXXXXXXILTEFYYVCYSKARDS 319
           LLAGSVRNAYHTKY TIF EDPPSCET+RK              IL+E YYVCYSKAR S
Sbjct: 109 LLAGSVRNAYHTKYRTIFSEDPPSCETLRKGVFGAGAAFTFFTAILSELYYVCYSKARGS 168

Query: 318 FQS--PYETGVGMGTYS 274
           F +    ETGVGMGTYS
Sbjct: 169 FPAYGGRETGVGMGTYS 185


>ref|NP_001238493.1| uncharacterized protein LOC100305647 precursor [Glycine max]
           gi|255626185|gb|ACU13437.1| unknown [Glycine max]
          Length = 185

 Score =  207 bits (528), Expect = 3e-51
 Identities = 112/197 (56%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
 Frame = -2

Query: 858 LVFVFILDLVAFGLAVAAEQRRSTANIVTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 679
           L+ VF+ DL+AFGLAVAAEQRRSTA++VTD+                             
Sbjct: 7   LITVFVFDLIAFGLAVAAEQRRSTASVVTDNEKNYNYCVYNSDIATGYG----------- 55

Query: 678 XXXXXXXVGSFLFLLAGQLLIMVASKCFCCGRALRPGGSRALAIILFIACWVTFFIAEVC 499
                  VG+FLFLL  Q+LIMVAS+CFCCG+ L PGGSRA A++LFI CWV F IAEVC
Sbjct: 56  -------VGAFLFLLVSQVLIMVASRCFCCGKPLNPGGSRACAVVLFIICWVFFIIAEVC 108

Query: 498 LLAGSVRNAYHTKYNTIFGEDPPSCETVRKXXXXXXXXXXXXXXILTEFYYVCYSKARDS 319
           LLAGSV NAYHTKY TIFGE+PPSCETVRK              I++EFYY+ YS+AR+S
Sbjct: 109 LLAGSVENAYHTKYRTIFGENPPSCETVRKGVFAAGAAFVFFTAIISEFYYINYSRARES 168

Query: 318 FQSPY---ETGVGMGTY 277
           FQ PY   ETGVGMGTY
Sbjct: 169 FQ-PYAGGETGVGMGTY 184


>ref|NP_001238205.1| uncharacterized protein LOC100499677 precursor [Glycine max]
           gi|255625711|gb|ACU13200.1| unknown [Glycine max]
          Length = 185

 Score =  202 bits (515), Expect = 9e-50
 Identities = 110/197 (55%), Positives = 128/197 (64%), Gaps = 3/197 (1%)
 Frame = -2

Query: 858 LVFVFILDLVAFGLAVAAEQRRSTANIVTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 679
           L+ VF+ DL+AFGLAVAAEQRRSTA+IV D+                             
Sbjct: 7   LITVFVFDLIAFGLAVAAEQRRSTASIVPDNEKNYNYCVYNSDIATGYG----------- 55

Query: 678 XXXXXXXVGSFLFLLAGQLLIMVASKCFCCGRALRPGGSRALAIILFIACWVTFFIAEVC 499
                  VG+FLFLL  Q+LIMVAS+CFCCG+ L PGGSRA A++LFI CWV F I+EVC
Sbjct: 56  -------VGAFLFLLVSQVLIMVASRCFCCGKPLNPGGSRACAVVLFIICWVFFIISEVC 108

Query: 498 LLAGSVRNAYHTKYNTIFGEDPPSCETVRKXXXXXXXXXXXXXXILTEFYYVCYSKARDS 319
           LL GSV NAYHTKY TIFGE+PPSCETVRK              I++EFYY+ YS+AR+S
Sbjct: 109 LLTGSVENAYHTKYRTIFGENPPSCETVRKGVFAAGAAFIFFTAIVSEFYYINYSRARES 168

Query: 318 FQSPY---ETGVGMGTY 277
           FQ PY   ETGVGMGTY
Sbjct: 169 FQ-PYAGGETGVGMGTY 184


>ref|XP_004141234.1| PREDICTED: uncharacterized protein LOC101208795 [Cucumis sativus]
           gi|449498665|ref|XP_004160599.1| PREDICTED:
           uncharacterized protein LOC101224700 [Cucumis sativus]
          Length = 184

 Score =  200 bits (508), Expect = 6e-49
 Identities = 108/196 (55%), Positives = 127/196 (64%), Gaps = 2/196 (1%)
 Frame = -2

Query: 858 LVFVFILDLVAFGLAVAAEQRRSTANIVTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 679
           L+ VF+LD++AFGLAVAAEQRRSTAN+V D                              
Sbjct: 7   LIIVFVLDIIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYG----------- 55

Query: 678 XXXXXXXVGSFLFLLAGQLLIMVASKCFCCGRALRPGGSRALAIILFIACWVTFFIAEVC 499
                  VG+FL L+A Q LIM AS+CFCCG++L PGGSRA A+ILFI CWV FFIAEVC
Sbjct: 56  -------VGAFLLLMASQTLIMAASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVC 108

Query: 498 LLAGSVRNAYHTKYNTIFGEDPPSCETVRKXXXXXXXXXXXXXXILTEFYYVCYSKARDS 319
           L AGSVRNAYHTKY T+FG++PPSC+T+RK              I++E YYV YSKAR+S
Sbjct: 109 LFAGSVRNAYHTKYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARES 168

Query: 318 FQSPY--ETGVGMGTY 277
           F  PY  ETGVGMGTY
Sbjct: 169 F-LPYGGETGVGMGTY 183


>gb|AAR07596.1| fiber protein Fb34 [Gossypium barbadense]
          Length = 185

 Score =  199 bits (507), Expect = 7e-49
 Identities = 108/196 (55%), Positives = 120/196 (61%), Gaps = 2/196 (1%)
 Frame = -2

Query: 858 LVFVFILDLVAFGLAVAAEQRRSTANIVTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 679
           L+ VF+LDL+AFGLAVAAEQRRSTA IV DS                             
Sbjct: 7   LIAVFVLDLIAFGLAVAAEQRRSTAKIVQDSEVNYNYCVYDSYISTGYG----------- 55

Query: 678 XXXXXXXVGSFLFLLAGQLLIMVASKCFCCGRALRPGGSRALAIILFIACWVTFFIAEVC 499
                  VG+FLFL+  Q LIM ASKCFCCG+ L P GSRA A+ILFI CW+ F IAE+C
Sbjct: 56  -------VGAFLFLMVSQALIMAASKCFCCGKGLNPSGSRAWAVILFIVCWLFFLIAEIC 108

Query: 498 LLAGSVRNAYHTKYNTIFGEDPPSCETVRKXXXXXXXXXXXXXXILTEFYYVCYSKARDS 319
           LLAGSVRNAYHTKY TIF E PPSCETVRK              I+ +FYY+CYS ARD 
Sbjct: 109 LLAGSVRNAYHTKYRTIFSEQPPSCETVRKGVFGAGAAFIFLNAIVNKFYYICYSSARDK 168

Query: 318 FQSPY--ETGVGMGTY 277
               Y  ETGVGMGTY
Sbjct: 169 SFQAYGGETGVGMGTY 184


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