BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004169
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   203   3e-50
gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]              202   6e-50
ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|2235292...   202   8e-50
gb|AAO85510.1| SKP1 [Nicotiana benthamiana]                           201   1e-49
ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512...   199   4e-49

>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score =  203 bits (516), Expect = 3e-50
 Identities = 100/156 (64%), Positives = 119/156 (76%)
 Frame = +2

Query: 110 TETAKLITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYC 289
           + + + ITL SSDGE FE++E VA+ES TIK++I+D   D GIPLPNV + +L+KVIEYC
Sbjct: 2   SSSGRKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 61

Query: 290 KHHVDNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADM 469
           K HV+ P K +DR  DDELK WD +FV+VDQ  LFDLILAANYLNIKGLLDLTC TVADM
Sbjct: 62  KKHVEAP-KTDDRSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADM 120

Query: 470 MKGKTPEEIRNTFHIVNDYTAXXXXXXXXXNSWAFE 577
           +KGKTPEEIR TF+I ND+T          N WAFE
Sbjct: 121 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


>gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]
          Length = 153

 Score =  202 bits (514), Expect = 6e-50
 Identities = 99/152 (65%), Positives = 120/152 (78%)
 Frame = +2

Query: 122 KLITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 301
           K+I L SSDGE FE+EE+VA+ES TIK++I+D   DT IPLPNV + +L+KVIEYCK HV
Sbjct: 2   KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHV 61

Query: 302 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 481
           D  SK ED+ V+D+LK +D +FV+VDQ+ LFDLILAANYLNIK LLDLTC TVADM+KGK
Sbjct: 62  DAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKSLLDLTCQTVADMIKGK 121

Query: 482 TPEEIRNTFHIVNDYTAXXXXXXXXXNSWAFE 577
           TPEEIR TF+I ND+T          N+WAFE
Sbjct: 122 TPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153


>ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|223529263|gb|EEF31235.1| skp1,
           putative [Ricinus communis]
          Length = 161

 Score =  202 bits (513), Expect = 8e-50
 Identities = 103/160 (64%), Positives = 122/160 (76%), Gaps = 6/160 (3%)
 Frame = +2

Query: 116 TAKLITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKH 295
           ++K ITL SSDGE FE++E VA+ES TIK++I+D   D+GIPLPNV + +L+KVIEYCK 
Sbjct: 2   SSKKITLKSSDGEPFEVDEVVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKK 61

Query: 296 HVDNP-SKIEDREV-----DDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCST 457
           HV+ P S  EDR +     DDELK WD EFV+VDQ+ LFDLILAANYLNIKGLLDLTC T
Sbjct: 62  HVETPKSSSEDRTINNSNTDDELKAWDAEFVKVDQSTLFDLILAANYLNIKGLLDLTCQT 121

Query: 458 VADMMKGKTPEEIRNTFHIVNDYTAXXXXXXXXXNSWAFE 577
           VADM+KGKTPEEIR TF+I ND+T          N WAFE
Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161


>gb|AAO85510.1| SKP1 [Nicotiana benthamiana]
          Length = 153

 Score =  201 bits (512), Expect = 1e-49
 Identities = 99/152 (65%), Positives = 120/152 (78%)
 Frame = +2

Query: 122 KLITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 301
           K+I L SSDGE FE+EE+VA+ES TIK++I+D   DT IPLPNV + +L+KVIEYCK HV
Sbjct: 2   KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHV 61

Query: 302 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 481
           D  SK ED+ V+D+LK +D +FV+VDQ+ LFDLILAANYLNIK LLDLTC TVADM+KGK
Sbjct: 62  DAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKRLLDLTCQTVADMIKGK 121

Query: 482 TPEEIRNTFHIVNDYTAXXXXXXXXXNSWAFE 577
           TPEEIR TF+I ND+T          N+WAFE
Sbjct: 122 TPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153


>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  199 bits (507), Expect = 4e-49
 Identities = 103/156 (66%), Positives = 119/156 (76%), Gaps = 2/156 (1%)
 Frame = +2

Query: 116 TAKLITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKH 295
           T++ ITL SSDGE FE++E VA+ES TIK++I+D   D GIPLPNV + +LSKVIEYCK 
Sbjct: 3   TSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62

Query: 296 HVDNPSKIEDR--EVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADM 469
           HV+  SK +DR   VDDELK WD EFV+VDQ  LFDLILAANYLNIK LLDLTC TVADM
Sbjct: 63  HVET-SKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 121

Query: 470 MKGKTPEEIRNTFHIVNDYTAXXXXXXXXXNSWAFE 577
           +KGKTPEEIR TF+I ND+T          N WAFE
Sbjct: 122 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157