BLASTX nr result

ID: Coptis25_contig00004153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004153
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE02025.2| OSJNBb0118P14.13 [Oryza sativa Japonica Group]        143   5e-32
emb|CAE05368.1| OJ000315_02.13 [Oryza sativa Japonica Group]          143   5e-32
ref|NP_001190487.1| uncharacterized protein [Arabidopsis thalian...   142   7e-32
ref|NP_001154766.1| uncharacterized protein [Arabidopsis thalian...   142   7e-32
ref|NP_001154765.1| uncharacterized protein [Arabidopsis thalian...   142   7e-32

>emb|CAE02025.2| OSJNBb0118P14.13 [Oryza sativa Japonica Group]
          Length = 415

 Score =  143 bits (360), Expect = 5e-32
 Identities = 73/129 (56%), Positives = 93/129 (72%)
 Frame = +3

Query: 453 RLSFSEIHTACYLICFFLKYFLLLQLMILVDDVGGVFPPINHSPWDGVTLADFVMPFFLF 632
           ++S  ++    +L C  L +   + LMILVDD G   P INHSPWDGVTLADFVMPFFLF
Sbjct: 15  QVSVVDVAEGQWLTCVHL-FMPEMPLMILVDDAGAFLPAINHSPWDGVTLADFVMPFFLF 73

Query: 633 IVGVALALAYKRLSSKVVATRTALLRAIKXXXXXXXXXXXYFHGIKDLTYGVNIEYIRWM 812
           IVGVALALAYKR+ +K+ ATR A+LRA+K           +FHG++ LT+G+++E IR M
Sbjct: 74  IVGVALALAYKRVPNKLEATRKAILRALKLFCVGLVLQGGFFHGVRSLTFGIDMEKIRLM 133

Query: 813 GVLQRIAIA 839
           G+LQRIAIA
Sbjct: 134 GILQRIAIA 142


>emb|CAE05368.1| OJ000315_02.13 [Oryza sativa Japonica Group]
          Length = 452

 Score =  143 bits (360), Expect = 5e-32
 Identities = 73/129 (56%), Positives = 93/129 (72%)
 Frame = +3

Query: 453 RLSFSEIHTACYLICFFLKYFLLLQLMILVDDVGGVFPPINHSPWDGVTLADFVMPFFLF 632
           ++S  ++    +L C  L +   + LMILVDD G   P INHSPWDGVTLADFVMPFFLF
Sbjct: 15  QVSVVDVAEGQWLTCVHL-FMPEMPLMILVDDAGAFLPAINHSPWDGVTLADFVMPFFLF 73

Query: 633 IVGVALALAYKRLSSKVVATRTALLRAIKXXXXXXXXXXXYFHGIKDLTYGVNIEYIRWM 812
           IVGVALALAYKR+ +K+ ATR A+LRA+K           +FHG++ LT+G+++E IR M
Sbjct: 74  IVGVALALAYKRVPNKLEATRKAILRALKLFCVGLVLQGGFFHGVRSLTFGIDMEKIRLM 133

Query: 813 GVLQRIAIA 839
           G+LQRIAIA
Sbjct: 134 GILQRIAIA 142


>ref|NP_001190487.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332008209|gb|AED95592.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 435

 Score =  142 bits (359), Expect = 7e-32
 Identities = 69/108 (63%), Positives = 83/108 (76%)
 Frame = +3

Query: 516 LLLQLMILVDDVGGVFPPINHSPWDGVTLADFVMPFFLFIVGVALALAYKRLSSKVVATR 695
           L +  MILVDDVGG+ P INHSPWDGVTLADFVMPFFLFIVGV+LA AYK LS + VATR
Sbjct: 55  LTVAFMILVDDVGGILPSINHSPWDGVTLADFVMPFFLFIVGVSLAFAYKNLSCRFVATR 114

Query: 696 TALLRAIKXXXXXXXXXXXYFHGIKDLTYGVNIEYIRWMGVLQRIAIA 839
            AL+R++K           + HG+ +LTYG+++E IR MG+LQRIAIA
Sbjct: 115 KALIRSLKLLLLGLFLQGGFIHGLNNLTYGIDVEKIRLMGILQRIAIA 162


>ref|NP_001154766.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332008207|gb|AED95590.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 295

 Score =  142 bits (359), Expect = 7e-32
 Identities = 69/108 (63%), Positives = 83/108 (76%)
 Frame = +3

Query: 516 LLLQLMILVDDVGGVFPPINHSPWDGVTLADFVMPFFLFIVGVALALAYKRLSSKVVATR 695
           L +  MILVDDVGG+ P INHSPWDGVTLADFVMPFFLFIVGV+LA AYK LS + VATR
Sbjct: 55  LTVAFMILVDDVGGILPSINHSPWDGVTLADFVMPFFLFIVGVSLAFAYKNLSCRFVATR 114

Query: 696 TALLRAIKXXXXXXXXXXXYFHGIKDLTYGVNIEYIRWMGVLQRIAIA 839
            AL+R++K           + HG+ +LTYG+++E IR MG+LQRIAIA
Sbjct: 115 KALIRSLKLLLLGLFLQGGFIHGLNNLTYGIDVEKIRLMGILQRIAIA 162


>ref|NP_001154765.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332008206|gb|AED95589.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 435

 Score =  142 bits (359), Expect = 7e-32
 Identities = 69/108 (63%), Positives = 83/108 (76%)
 Frame = +3

Query: 516 LLLQLMILVDDVGGVFPPINHSPWDGVTLADFVMPFFLFIVGVALALAYKRLSSKVVATR 695
           L +  MILVDDVGG+ P INHSPWDGVTLADFVMPFFLFIVGV+LA AYK LS + VATR
Sbjct: 49  LTVAFMILVDDVGGILPSINHSPWDGVTLADFVMPFFLFIVGVSLAFAYKNLSCRFVATR 108

Query: 696 TALLRAIKXXXXXXXXXXXYFHGIKDLTYGVNIEYIRWMGVLQRIAIA 839
            AL+R++K           + HG+ +LTYG+++E IR MG+LQRIAIA
Sbjct: 109 KALIRSLKLLLLGLFLQGGFIHGLNNLTYGIDVEKIRLMGILQRIAIA 156


Top