BLASTX nr result
ID: Coptis25_contig00004137
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004137
(3031 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276047.1| PREDICTED: EIN3-binding F-box protein 1 [Vit... 379 e-102
gb|ABI64127.1| putative F-box and leucine-rich repeat protein [J... 369 4e-99
ref|XP_002513122.1| glucose regulated repressor protein, putativ... 368 5e-99
ref|XP_002307150.1| predicted protein [Populus trichocarpa] gi|2... 367 1e-98
ref|XP_004147107.1| PREDICTED: F-box/LRR-repeat protein 20-like ... 365 4e-98
>ref|XP_002276047.1| PREDICTED: EIN3-binding F-box protein 1 [Vitis vinifera]
Length = 413
Score = 379 bits (974), Expect = e-102
Identities = 188/305 (61%), Positives = 227/305 (74%), Gaps = 2/305 (0%)
Frame = -1
Query: 2320 LFINFCAGVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGC-NLRSLHLEGCKF 2144
L + C G+TDVG++A+ L HLQSLDVSYCRK+TD+GL AIA+ C +LRSLHL GC+
Sbjct: 109 LGLQHCRGITDVGLMAIGRNLSHLQSLDVSYCRKLTDKGLSAIAESCCDLRSLHLAGCRS 168
Query: 2143 VTDKXXXXXXXXXXXXXXXXXXXCIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSC 1964
V DK C ITD GL LV GC+++K LD++KCSN+ D GV
Sbjct: 169 VNDKVLEALSKNCHNLEELGLQGCTYITDSGLTFLVKGCQRMKFLDINKCSNISDIGVCS 228
Query: 1963 VSKACSSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLA-CN 1787
VS +CS L T KLLDC+K+GD S+ SLAQ CKNLE L+IGGCR+ISDES+KSL +A C+
Sbjct: 229 VSISCSCSLKTLKLLDCYKVGDESVLSLAQFCKNLETLIIGGCRDISDESVKSLAIAACS 288
Query: 1786 HSLKFLRMDWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFL 1607
HSLK LRMDWCLN+SD +L C+ C +LEALDIGCCEEVTD AF+ + G + LK L
Sbjct: 289 HSLKNLRMDWCLNISDLSLNCIFCNCRNLEALDIGCCEEVTDAAFQGLNKGGSKLGLKVL 348
Query: 1606 RVSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQ 1427
+VSNCPKITV+GI +LLDSC SLEYLDVRSCP+VTEA C QAGL+FP+CCKVNF GSLS+
Sbjct: 349 KVSNCPKITVAGIGLLLDSCNSLEYLDVRSCPHVTEAGCDQAGLQFPECCKVNFLGSLSE 408
Query: 1426 LDALV 1412
D LV
Sbjct: 409 PDVLV 413
Score = 97.4 bits (241), Expect = 2e-17
Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 53/244 (21%)
Frame = -1
Query: 2065 ITDMGLAVLVDG-----------CR---------------QIKSLDVSKCSNVGDAGVSC 1964
+TD L V+ DG CR ++SLDVS C + D G+S
Sbjct: 91 VTDSDLKVIADGFGCLRVLGLQHCRGITDVGLMAIGRNLSHLQSLDVSYCRKLTDKGLSA 150
Query: 1963 VSKACSSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNH 1784
++++C L + L C + D + +L+++C NLE L + GC I+D L LV C
Sbjct: 151 IAESCCD-LRSLHLAGCRSVNDKVLEALSKNCHNLEELGLQGCTYITDSGLTFLVKGCQR 209
Query: 1783 SLKFLRMDWCLNVSD-----TTLGCVLSQ----------------------CGSLEALDI 1685
+KFL ++ C N+SD ++ C S C +LE L I
Sbjct: 210 -MKFLDINKCSNISDIGVCSVSISCSCSLKTLKLLDCYKVGDESVLSLAQFCKNLETLII 268
Query: 1684 GCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNV 1505
G C +++D + + + A LK LR+ C I+ + + +C++LE LD+ C V
Sbjct: 269 GGCRDISDESVKSLAIAACSHSLKNLRMDWCLNISDLSLNCIFCNCRNLEALDIGCCEEV 328
Query: 1504 TEAS 1493
T+A+
Sbjct: 329 TDAA 332
>gb|ABI64127.1| putative F-box and leucine-rich repeat protein [Jatropha curcas]
Length = 407
Score = 369 bits (946), Expect = 4e-99
Identities = 178/304 (58%), Positives = 228/304 (75%), Gaps = 1/304 (0%)
Frame = -1
Query: 2320 LFINFCAGVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGC-NLRSLHLEGCKF 2144
L + +C G+TD GM ++ GL LQSLDVS+CRK+TD+GL A+A+GC +L+SLHL GC+
Sbjct: 104 LSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRL 163
Query: 2143 VTDKXXXXXXXXXXXXXXXXXXXCIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSC 1964
+TD C ITD GL LV GC+QI+ LD++KCSN+GD G+S
Sbjct: 164 ITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISN 223
Query: 1963 VSKACSSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNH 1784
+SKACSS L T K+LDC+K+GD SI SLA+ C NLE L+IGGCR+ISD S+K L AC +
Sbjct: 224 LSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSIKLLASACKN 283
Query: 1783 SLKFLRMDWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLR 1604
SLK LRMDWCLNVSD++L C+L++C +LEALDIGCCEE+TD AF+ + + E LK L+
Sbjct: 284 SLKTLRMDWCLNVSDSSLSCILTECRNLEALDIGCCEEITDAAFQGLATIKTELGLKILK 343
Query: 1603 VSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQL 1424
VSNCPKITV+GI MLL+ C LEYLDVRSCP+VT++ C +AGL+FP CCKVN+TGSL++
Sbjct: 344 VSNCPKITVTGIGMLLEKCNGLEYLDVRSCPHVTKSGCDEAGLQFPKCCKVNYTGSLNEP 403
Query: 1423 DALV 1412
D LV
Sbjct: 404 DVLV 407
Score = 99.8 bits (247), Expect = 4e-18
Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 62/271 (22%)
Frame = -1
Query: 2065 ITDMGLAVLVDGCR--------------------------QIKSLDVSKCSNVGDAGVSC 1964
+TD LAV+ G + ++SLDVS C + D G+
Sbjct: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
Query: 1963 VSKACSSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLV----- 1799
V++ C L + L C I DG + +L+ +C L+ L + GC +I+D+ L LV
Sbjct: 146 VAEGCKD-LQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQ 204
Query: 1798 ---------------------LACNHSLKFLRMDWCLNVSDTTLGCVLSQCGSLEALDIG 1682
AC+ LK L+M C V D ++ + C +LE L IG
Sbjct: 205 IQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIG 264
Query: 1681 CCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNVT 1502
C +++D + + + SA ++ LK LR+ C ++ S + +L C++LE LD+ C +T
Sbjct: 265 GCRDISDNSIKLLASA-CKNSLKTLRMDWCLNVSDSSLSCILTECRNLEALDIGCCEEIT 323
Query: 1501 EASCYQAG----------LRFPDCCKVNFTG 1439
+A+ L+ +C K+ TG
Sbjct: 324 DAAFQGLATIKTELGLKILKVSNCPKITVTG 354
>ref|XP_002513122.1| glucose regulated repressor protein, putative [Ricinus communis]
gi|223548133|gb|EEF49625.1| glucose regulated repressor
protein, putative [Ricinus communis]
Length = 407
Score = 368 bits (945), Expect = 5e-99
Identities = 175/299 (58%), Positives = 228/299 (76%), Gaps = 1/299 (0%)
Frame = -1
Query: 2305 CAGVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGC-NLRSLHLEGCKFVTDKX 2129
C G+TD GM ++ GL LQSLDVSYCRK+TD+GL A+A GC +LR LHL GC+F+TD+
Sbjct: 109 CKGITDNGMRSIGCGLSSLQSLDVSYCRKLTDKGLSAVAGGCRDLRILHLAGCRFITDEV 168
Query: 2128 XXXXXXXXXXXXXXXXXXCIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKAC 1949
C ITD G+ LV GC+QI+ LD++KCSN+GD G+S +SKAC
Sbjct: 169 LKALSTSCSNLQELGLQGCTNITDSGVKDLVSGCKQIQFLDINKCSNIGDVGISNLSKAC 228
Query: 1948 SSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNHSLKFL 1769
SS L T KLLDC+K+GD S+ SLA+ C NLE L+IGGCR+ISD+S+K L AC +SLK L
Sbjct: 229 SSCLKTLKLLDCYKVGDESLSSLAKFCNNLETLIIGGCRDISDQSVKLLASACTNSLKNL 288
Query: 1768 RMDWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCP 1589
RMDWCLN+SD++L C+L++C +LEALDIGCCEEVTD AF+ +G+ + +LK L++SNCP
Sbjct: 289 RMDWCLNISDSSLSCILTECRNLEALDIGCCEEVTDAAFQVLGTVENKLKLKVLKISNCP 348
Query: 1588 KITVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQLDALV 1412
KITV+GI LL+ C LEYLDVRSCP+VT++ C +AGL+FP+CCKVN+TGSL++ D L+
Sbjct: 349 KITVTGIGRLLEKCNVLEYLDVRSCPHVTKSGCEEAGLQFPECCKVNYTGSLNEPDVLI 407
>ref|XP_002307150.1| predicted protein [Populus trichocarpa] gi|222856599|gb|EEE94146.1|
predicted protein [Populus trichocarpa]
Length = 406
Score = 367 bits (942), Expect = 1e-98
Identities = 177/298 (59%), Positives = 225/298 (75%), Gaps = 1/298 (0%)
Frame = -1
Query: 2305 CAGVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGCN-LRSLHLEGCKFVTDKX 2129
C G++D GM ++ GL LQSL+VSYCRK+TD+GL A+A+G LRSLHL+GCKFVTD
Sbjct: 108 CKGISDKGMSSIGGGLSSLQSLNVSYCRKLTDKGLSAVAEGSQGLRSLHLDGCKFVTDVV 167
Query: 2128 XXXXXXXXXXXXXXXXXXCIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKAC 1949
C ITD GLA LV GCRQI LD++KCSNVGD+GVS VS+AC
Sbjct: 168 LKALSKNCPNLEELGLQGCTSITDCGLADLVSGCRQIHFLDINKCSNVGDSGVSTVSEAC 227
Query: 1948 SSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNHSLKFL 1769
SS++ T KL+DC ++G+ SI SLA+ CKNLE L+IGGCR+ISDES+KSL +C SLK L
Sbjct: 228 SSFMKTLKLMDCFRVGNKSILSLAKFCKNLETLIIGGCRDISDESIKSLATSCQSSLKNL 287
Query: 1768 RMDWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCP 1589
RMDWCLN+S++++ +L++C +LEALDIGCC EVTD F +G+ E RLK L++S+CP
Sbjct: 288 RMDWCLNISNSSISFILTKCRNLEALDIGCCGEVTDAVFHGLGAMETEMRLKVLKISSCP 347
Query: 1588 KITVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQLDAL 1415
KITV+GI MLLD C SLEYLDVRSCP++T++ C + GL+FPDCCKVNF GSL++ D L
Sbjct: 348 KITVTGIGMLLDKCNSLEYLDVRSCPHITKSGCDEVGLQFPDCCKVNFNGSLNEPDVL 405
Score = 99.4 bits (246), Expect = 5e-18
Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 62/277 (22%)
Frame = -1
Query: 2065 ITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSSY------------------ 1940
+TD LAV+ DG R +K L++ C + D G+S + SS
Sbjct: 85 VTDSDLAVIADGFRCLKVLNLQNCKGISDKGMSSIGGGLSSLQSLNVSYCRKLTDKGLSA 144
Query: 1939 -------LMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNHS 1781
L + L C + D + +L+++C NLE L + GC +I+D L LV C
Sbjct: 145 VAEGSQGLRSLHLDGCKFVTDVVLKALSKNCPNLEELGLQGCTSITDCGLADLVSGC-RQ 203
Query: 1780 LKFLRMDWCLNVSDTTLGCVLSQCGS---------------------------LEALDIG 1682
+ FL ++ C NV D+ + V C S LE L IG
Sbjct: 204 IHFLDINKCSNVGDSGVSTVSEACSSFMKTLKLMDCFRVGNKSILSLAKFCKNLETLIIG 263
Query: 1681 CCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNVT 1502
C +++D + + + ++ +S LK LR+ C I+ S I +L C++LE LD+ C VT
Sbjct: 264 GCRDISDESIKSLATS-CQSSLKNLRMDWCLNISNSSISFILTKCRNLEALDIGCCGEVT 322
Query: 1501 EASCYQAG----------LRFPDCCKVNFTGSLSQLD 1421
+A + G L+ C K+ TG LD
Sbjct: 323 DAVFHGLGAMETEMRLKVLKISSCPKITVTGIGMLLD 359
>ref|XP_004147107.1| PREDICTED: F-box/LRR-repeat protein 20-like [Cucumis sativus]
gi|449503502|ref|XP_004162034.1| PREDICTED:
F-box/LRR-repeat protein 20-like [Cucumis sativus]
Length = 421
Score = 365 bits (937), Expect = 4e-98
Identities = 176/301 (58%), Positives = 223/301 (74%), Gaps = 1/301 (0%)
Frame = -1
Query: 2320 LFINFCAGVTDVGMVALANGLPHLQSLDVSYCRKITDRGLEAIAKGC-NLRSLHLEGCKF 2144
L + +C ++D G+ A+ +GL LQSLDVSYCRK+TD+G A+A+GC ++R+L+L GCK
Sbjct: 118 LNLQYCKSISDSGLAAIGSGLSKLQSLDVSYCRKLTDKGFSAVAEGCRDIRNLNLAGCKL 177
Query: 2143 VTDKXXXXXXXXXXXXXXXXXXXCIKITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSC 1964
VTD C ITD GL LV GC++I+ LDV+KCSNVGD GVS
Sbjct: 178 VTDGLLKTLSKNCHSLEELGLHGCTNITDSGLRELVKGCQKIEILDVNKCSNVGDVGVSS 237
Query: 1963 VSKACSSYLMTFKLLDCHKIGDGSIFSLAQSCKNLEILVIGGCRNISDESLKSLVLACNH 1784
VSKACSS L TFKLLDC+KI D SI SLA+ C NLE L+IGGCR+ISDES++ L LAC
Sbjct: 238 VSKACSSSLKTFKLLDCYKIKDDSILSLAEFCNNLETLIIGGCRDISDESIQKLALACKS 297
Query: 1783 SLKFLRMDWCLNVSDTTLGCVLSQCGSLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLR 1604
+L+ LRMDWCLN++D++L C+ + C +LEALDIGCCEEVTD AF +GS G E LK L+
Sbjct: 298 NLRTLRMDWCLNITDSSLSCIFTHCSNLEALDIGCCEEVTDAAFHSLGSDGIEVNLKVLK 357
Query: 1603 VSNCPKITVSGIEMLLDSCKSLEYLDVRSCPNVTEASCYQAGLRFPDCCKVNFTGSLSQL 1424
+SNCPKIT++ I +L+DSC SLEYLDVRSCP++T+A C +AGL+FP CKVNF GSL +
Sbjct: 358 ISNCPKITLATISILVDSCNSLEYLDVRSCPHITKAGCDEAGLQFPASCKVNFAGSLCEP 417
Query: 1423 D 1421
D
Sbjct: 418 D 418
Score = 98.2 bits (243), Expect = 1e-17
Identities = 58/206 (28%), Positives = 106/206 (51%)
Frame = -1
Query: 2065 ITDMGLAVLVDGCRQIKSLDVSKCSNVGDAGVSCVSKACSSYLMTFKLLDCHKIGDGSIF 1886
+TD L V+ +G + + L++ C ++ D+G++ + S L + + C K+ D
Sbjct: 100 VTDSDLTVVANGFQYLIVLNLQYCKSISDSGLAAIGSGLSK-LQSLDVSYCRKLTDKGFS 158
Query: 1885 SLAQSCKNLEILVIGGCRNISDESLKSLVLACNHSLKFLRMDWCLNVSDTTLGCVLSQCG 1706
++A+ C+++ L + GC+ ++D LK+L C HSL+ L + C N++D+ L ++ C
Sbjct: 159 AVAEGCRDIRNLNLAGCKLVTDGLLKTLSKNC-HSLEELGLHGCTNITDSGLRELVKGCQ 217
Query: 1705 SLEALDIGCCEEVTDGAFRKIGSAGFESRLKFLRVSNCPKITVSGIEMLLDSCKSLEYLD 1526
+E LD+ C V D + A S LK ++ +C KI I L + C +LE L
Sbjct: 218 KIEILDVNKCSNVGDVGVSSVSKA-CSSSLKTFKLLDCYKIKDDSILSLAEFCNNLETLI 276
Query: 1525 VRSCPNVTEASCYQAGLRFPDCCKVN 1448
+ C ++++ S + L CK N
Sbjct: 277 IGGCRDISDESIQKLAL----ACKSN 298