BLASTX nr result

ID: Coptis25_contig00004126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004126
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15097.3| unnamed protein product [Vitis vinifera]               70   7e-11
ref|XP_002280437.2| PREDICTED: uncharacterized protein LOC100258...    70   2e-10
ref|XP_002321559.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002511470.1| Arginine/serine-rich coiled coil protein, pu...    69   4e-10
ref|NP_001240990.1| uncharacterized protein LOC100795790 [Glycin...    62   4e-08

>emb|CBI15097.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 69.7 bits (169), Expect(2) = 7e-11
 Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = +2

Query: 2   YYEELTRQEEGAARFKQGLGFSSNTPDPITKGXXXXXXXXXXXXVKATSPTK---VDKQV 172
           YY+ELTR+ EGAARFKQGLGFSS +    T              V+A+SPTK   ++KQ 
Sbjct: 9   YYDELTRKGEGAARFKQGLGFSSQSS---TSTAPSKTRSFLSNFVRASSPTKASQLEKQA 65

Query: 173 QLENIQNKLKKKDGNANE 226
           QLE+IQNKLKKK  +  E
Sbjct: 66  QLESIQNKLKKKPKSCEE 83



 Score = 21.9 bits (45), Expect(2) = 7e-11
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +1

Query: 313 AKSSNEGTSSKKK---VDYSRLIKGSEEM 390
           A++   G   K+K   VDY+RLI G ++M
Sbjct: 108 AETGGVGWVGKEKNGGVDYARLIDGYDKM 136


>ref|XP_002280437.2| PREDICTED: uncharacterized protein LOC100258813 [Vitis vinifera]
          Length = 332

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = +2

Query: 2   YYEELTRQEEGAARFKQGLGFSSNTPDPITKGXXXXXXXXXXXXVKATSPTK---VDKQV 172
           YY+ELTR+ EGAARFKQGLGFSS +    T              V+A+SPTK   ++KQ 
Sbjct: 9   YYDELTRKGEGAARFKQGLGFSSQSS---TSTAPSKTRSFLSNFVRASSPTKASQLEKQA 65

Query: 173 QLENIQNKLKKKDGNANE 226
           QLE+IQNKLKKK  +  E
Sbjct: 66  QLESIQNKLKKKPKSCEE 83


>ref|XP_002321559.1| predicted protein [Populus trichocarpa] gi|222868555|gb|EEF05686.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 7/76 (9%)
 Frame = +2

Query: 2   YYEELTRQEEGAARFKQGLGFSSN----TPDPITKGXXXXXXXXXXXXVKATSPTK---V 160
           YYEELTR+ +GAARFKQGLGFS+N     P P                VKA+SPT+   +
Sbjct: 9   YYEELTRKGQGAARFKQGLGFSANKDVAAPPPRGSALPSSTASFLSNFVKASSPTQASNL 68

Query: 161 DKQVQLENIQNKLKKK 208
           ++Q QLE+IQNKLKKK
Sbjct: 69  ERQAQLESIQNKLKKK 84


>ref|XP_002511470.1| Arginine/serine-rich coiled coil protein, putative [Ricinus
           communis] gi|223550585|gb|EEF52072.1|
           Arginine/serine-rich coiled coil protein, putative
           [Ricinus communis]
          Length = 324

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/73 (56%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
 Frame = +2

Query: 2   YYEELTRQEEGAARFKQGLGFSSNTPDPIT-KGXXXXXXXXXXXXVKATSPT---KVDKQ 169
           YYEELTR+ EGAARFKQGLGFSSN   P                 VK++SPT   K +K+
Sbjct: 9   YYEELTRKGEGAARFKQGLGFSSNNSAPSRGSSFSSSSSSFLSNFVKSSSPTQTSKFEKE 68

Query: 170 VQLENIQNKLKKK 208
            QLE IQNKLKKK
Sbjct: 69  AQLEAIQNKLKKK 81


>ref|NP_001240990.1| uncharacterized protein LOC100795790 [Glycine max]
           gi|255647901|gb|ACU24409.1| unknown [Glycine max]
          Length = 300

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   YYEELTRQEEGAARFKQGLGFSSNTP-DPITKGXXXXXXXXXXXXVKATSPTKVDKQVQL 178
           YY+EL+R+ EGAARFKQGLGFSS+ P D + K               +T+P+  +KQ QL
Sbjct: 9   YYDELSRKGEGAARFKQGLGFSSSAPNDDVPK---PSSFLSKFVKASSTAPSNSEKQAQL 65

Query: 179 ENIQNKLKKK 208
           ++I +KLKKK
Sbjct: 66  QSIHHKLKKK 75


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