BLASTX nr result

ID: Coptis25_contig00004114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004114
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267414.1| PREDICTED: thiazole biosynthetic enzyme, chl...   380   e-103
ref|XP_002317206.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
ref|XP_002305603.1| predicted protein [Populus trichocarpa] gi|1...   379   e-103
gb|AFM35683.1| thiamin biosynthetic protein [Vitis pseudoreticul...   378   e-102
ref|XP_002281769.1| PREDICTED: thiazole biosynthetic enzyme, chl...   375   e-102

>ref|XP_002267414.1| PREDICTED: thiazole biosynthetic enzyme, chloroplastic [Vitis
           vinifera] gi|378524328|sp|F6H7K5.1|THI42_VITVI RecName:
           Full=Thiamine thiazole synthase 2, chloroplastic;
           AltName: Full=Thiazole biosynthetic enzyme 2; Flags:
           Precursor
          Length = 355

 Score =  380 bits (976), Expect = e-103
 Identities = 191/243 (78%), Positives = 209/243 (86%)
 Frame = -1

Query: 730 ISTKPKTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEPIKE 551
           +S+ PK +F D++SSFHG P +    +V P++               YDL SF FEPIKE
Sbjct: 11  LSSNPKPAFFDNKSSFHGSPISY---RVLPIKVSHQSPTISMSSVSPYDLQSFKFEPIKE 67

Query: 550 SIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGGA 371
           SIV+REMTRRYMMDMITYADTDVV+VGAGSAGL+ AYE+SKNP++ VA+IEQSVSPGGGA
Sbjct: 68  SIVAREMTRRYMMDMITYADTDVVIVGAGSAGLSCAYELSKNPSIRVAIIEQSVSPGGGA 127

Query: 370 WLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFN 191
           WLGGQLFSAMVVRKPAH FLDEL IEYDEQD YVVIKHAALFTSTIMSKLLARPNVKLFN
Sbjct: 128 WLGGQLFSAMVVRKPAHHFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFN 187

Query: 190 AVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 11
           AVAAEDLIVK  +VAGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVK
Sbjct: 188 AVAAEDLIVKEERVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 247

Query: 10  RLK 2
           RLK
Sbjct: 248 RLK 250


>ref|XP_002317206.1| predicted protein [Populus trichocarpa] gi|222860271|gb|EEE97818.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  380 bits (975), Expect = e-103
 Identities = 192/246 (78%), Positives = 212/246 (86%)
 Frame = -1

Query: 739 TSHISTKPKTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEP 560
           T ++S   K+SFLD++SSFHG P T T  +  P++               YDL SF F+P
Sbjct: 6   TPYLSANLKSSFLDNKSSFHGTPITTTT-RFTPIKSTSPAISMSLTQPS-YDLQSFKFQP 63

Query: 559 IKESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPG 380
           IKESIVSREMTRRYM DM+TYADTDVV+VGAGSAGL+ AYE+SKNP+V VA+IEQSVSPG
Sbjct: 64  IKESIVSREMTRRYMTDMVTYADTDVVIVGAGSAGLSCAYELSKNPSVRVAIIEQSVSPG 123

Query: 379 GGAWLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVK 200
           GGAWLGGQLFSAM+VRKPAHRFLDELEIEYDE D YVVIKHAALFTSTIMSKLLARPNVK
Sbjct: 124 GGAWLGGQLFSAMIVRKPAHRFLDELEIEYDEADNYVVIKHAALFTSTIMSKLLARPNVK 183

Query: 199 LFNAVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGAT 20
           LFNAVAAEDLIVKG +V+GVVTNWALVSMNH+TQSCMDPNVMEAK+VVSSCGHDGPFGAT
Sbjct: 184 LFNAVAAEDLIVKGGRVSGVVTNWALVSMNHNTQSCMDPNVMEAKVVVSSCGHDGPFGAT 243

Query: 19  GVKRLK 2
           GVKRLK
Sbjct: 244 GVKRLK 249


>ref|XP_002305603.1| predicted protein [Populus trichocarpa] gi|118486164|gb|ABK94925.1|
           unknown [Populus trichocarpa]
           gi|222848567|gb|EEE86114.1| predicted protein [Populus
           trichocarpa]
          Length = 350

 Score =  379 bits (974), Expect = e-103
 Identities = 195/246 (79%), Positives = 211/246 (85%)
 Frame = -1

Query: 739 TSHISTKPKTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEP 560
           TS +S   K+SFLD +SSFHG P T T  +  P++               YDL SF F+P
Sbjct: 6   TSSLSINLKSSFLDHKSSFHGTPITTTG-RFTPIKSTSPAITMSLTQPS-YDLQSFKFQP 63

Query: 559 IKESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPG 380
           IKESIVSREMTRRYM DM+TYADTDVVVVGAGSAGL+ AYE+SKNP+V VA+IEQSVSPG
Sbjct: 64  IKESIVSREMTRRYMTDMVTYADTDVVVVGAGSAGLSCAYELSKNPSVRVAIIEQSVSPG 123

Query: 379 GGAWLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVK 200
           GGAWLGGQLFSAM+VRKPAHRFLDELEIEYDE D YVVIKHAALFTSTIMSKLLARPNVK
Sbjct: 124 GGAWLGGQLFSAMIVRKPAHRFLDELEIEYDEADNYVVIKHAALFTSTIMSKLLARPNVK 183

Query: 199 LFNAVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGAT 20
           LFNAVAAEDLIVKG +V+GVVTNWALVSMNH+TQSCMDPNVMEAKIVVSSCGHDGPFGAT
Sbjct: 184 LFNAVAAEDLIVKGGRVSGVVTNWALVSMNHNTQSCMDPNVMEAKIVVSSCGHDGPFGAT 243

Query: 19  GVKRLK 2
           GVKRLK
Sbjct: 244 GVKRLK 249


>gb|AFM35683.1| thiamin biosynthetic protein [Vitis pseudoreticulata]
          Length = 355

 Score =  378 bits (970), Expect = e-102
 Identities = 190/243 (78%), Positives = 208/243 (85%)
 Frame = -1

Query: 730 ISTKPKTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFEPIKE 551
           +S+ PK +F D++SSFHG P +    +V P++               YDL SF FEPIKE
Sbjct: 11  LSSNPKPAFFDNKSSFHGSPISY---RVLPIKVSHQSPTISMSSASPYDLQSFKFEPIKE 67

Query: 550 SIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGGA 371
           SIV+REMTRRYMMDMITYADTDVV+VGAGSAGL+ AYE+SKNP++ VA+IEQSVSPGGGA
Sbjct: 68  SIVAREMTRRYMMDMITYADTDVVIVGAGSAGLSCAYELSKNPSIRVAIIEQSVSPGGGA 127

Query: 370 WLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFN 191
           WLGGQLFSAMVVRKPAH FLDEL IEYDEQD YVVIKHAALFTSTIMSKLLARPNVKL N
Sbjct: 128 WLGGQLFSAMVVRKPAHHFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLLN 187

Query: 190 AVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 11
           AVAAEDLIVK  +VAGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVK
Sbjct: 188 AVAAEDLIVKEERVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 247

Query: 10  RLK 2
           RLK
Sbjct: 248 RLK 250


>ref|XP_002281769.1| PREDICTED: thiazole biosynthetic enzyme, chloroplastic isoform 1
           [Vitis vinifera] gi|359494007|ref|XP_003634708.1|
           PREDICTED: thiazole biosynthetic enzyme, chloroplastic
           [Vitis vinifera] gi|378524288|sp|F6H9A9.1|THI41_VITVI
           RecName: Full=Thiamine thiazole synthase 1,
           chloroplastic; AltName: Full=Thiazole biosynthetic
           enzyme 1; Flags: Precursor
          Length = 353

 Score =  375 bits (964), Expect = e-102
 Identities = 194/247 (78%), Positives = 210/247 (85%), Gaps = 1/247 (0%)
 Frame = -1

Query: 739 TSHISTKPKTSFLDS-QSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXSYDLNSFTFE 563
           TS I +KPK S  D  +SSFHG+P   T  ++ P++               YDL SF FE
Sbjct: 5   TSSICSKPKASVFDPHKSSFHGVPIA-TQARLSPVKSTPVNLAVTAAAMP-YDLRSFKFE 62

Query: 562 PIKESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSP 383
           PIKESIVSREMTRRYMMDMITYADTDVVVVGAGSAGL+ AYE+SKNP+V VA+IEQSVSP
Sbjct: 63  PIKESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLSCAYELSKNPSVQVAIIEQSVSP 122

Query: 382 GGGAWLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNV 203
           GGGAWLGGQLFS+MVVRKPAHRFLDEL +EYDEQD YVVIKHAALFTSTIMSKLLARPNV
Sbjct: 123 GGGAWLGGQLFSSMVVRKPAHRFLDELGLEYDEQDNYVVIKHAALFTSTIMSKLLARPNV 182

Query: 202 KLFNAVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGA 23
           KLFNAVAAEDLI+K  KV GVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGA
Sbjct: 183 KLFNAVAAEDLIIKEGKVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGA 242

Query: 22  TGVKRLK 2
           TGVKRL+
Sbjct: 243 TGVKRLR 249


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