BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004110
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populu...   144   3e-35
ref|XP_002302153.1| predicted protein [Populus trichocarpa] gi|2...   144   3e-35
gb|ABK94272.1| unknown [Populus trichocarpa]                          144   3e-35
ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|22...   142   3e-35
ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2...   143   3e-34

>gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
          Length = 154

 Score =  144 bits (363), Expect(2) = 3e-35
 Identities = 72/73 (98%), Positives = 72/73 (98%)
 Frame = -3

Query: 591 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 412
           YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 118

Query: 411 LIYAGKQLADDKT 373
           LIYAGKQL DDKT
Sbjct: 119 LIYAGKQLGDDKT 131



 Score = 30.0 bits (66), Expect(2) = 3e-35
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 263 SVLHLVLALRGGC 225
           SVLHLVLALRGGC
Sbjct: 141 SVLHLVLALRGGC 153



 Score = 71.2 bits (173), Expect(2) = 2e-11
 Identities = 32/53 (60%), Positives = 43/53 (81%)
 Frame = -3

Query: 531 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 373
           I VKTLTGK I +++E +D ID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 3   IFVKTLTGKTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55



 Score = 23.1 bits (48), Expect(2) = 2e-11
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 263 SVLHLVLALRGG 228
           S LHLVL LRGG
Sbjct: 65  STLHLVLRLRGG 76


>ref|XP_002302153.1| predicted protein [Populus trichocarpa]
           gi|224082516|ref|XP_002306725.1| predicted protein
           [Populus trichocarpa] gi|118485172|gb|ABK94447.1|
           unknown [Populus trichocarpa]
           gi|222843879|gb|EEE81426.1| predicted protein [Populus
           trichocarpa] gi|222856174|gb|EEE93721.1| predicted
           protein [Populus trichocarpa]
          Length = 154

 Score =  144 bits (363), Expect(2) = 3e-35
 Identities = 72/73 (98%), Positives = 72/73 (98%)
 Frame = -3

Query: 591 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 412
           YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 118

Query: 411 LIYAGKQLADDKT 373
           LIYAGKQL DDKT
Sbjct: 119 LIYAGKQLGDDKT 131



 Score = 30.0 bits (66), Expect(2) = 3e-35
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 263 SVLHLVLALRGGC 225
           SVLHLVLALRGGC
Sbjct: 141 SVLHLVLALRGGC 153



 Score = 73.2 bits (178), Expect(2) = 5e-12
 Identities = 33/53 (62%), Positives = 44/53 (83%)
 Frame = -3

Query: 531 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 373
           I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55



 Score = 23.1 bits (48), Expect(2) = 5e-12
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 263 SVLHLVLALRGG 228
           S LHLVL LRGG
Sbjct: 65  STLHLVLRLRGG 76


>gb|ABK94272.1| unknown [Populus trichocarpa]
          Length = 154

 Score =  144 bits (363), Expect(2) = 3e-35
 Identities = 72/73 (98%), Positives = 72/73 (98%)
 Frame = -3

Query: 591 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 412
           YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 118

Query: 411 LIYAGKQLADDKT 373
           LIYAGKQL DDKT
Sbjct: 119 LIYAGKQLGDDKT 131



 Score = 30.0 bits (66), Expect(2) = 3e-35
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 263 SVLHLVLALRGGC 225
           SVLHLVLALRGGC
Sbjct: 141 SVLHLVLALRGGC 153



 Score = 71.2 bits (173), Expect(2) = 2e-11
 Identities = 33/53 (62%), Positives = 43/53 (81%)
 Frame = -3

Query: 531 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 373
           I VKTLTGK I +++E +DTID +K ++ +KEGIPP QQRLI+AGKQL D +T
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRT 55



 Score = 23.1 bits (48), Expect(2) = 2e-11
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 263 SVLHLVLALRGG 228
           S LHLVL LRGG
Sbjct: 65  STLHLVLRLRGG 76


>ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|223547286|gb|EEF48781.1|
           ubiquitin, putative [Ricinus communis]
          Length = 154

 Score =  142 bits (357), Expect(2) = 3e-35
 Identities = 71/73 (97%), Positives = 71/73 (97%)
 Frame = -3

Query: 591 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 412
           YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 411 LIYAGKQLADDKT 373
           LIYAGKQL DDKT
Sbjct: 119 LIYAGKQLGDDKT 131



 Score = 32.3 bits (72), Expect(2) = 3e-35
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -1

Query: 263 SVLHLVLALRGGCF 222
           SVLHLVLALRGGCF
Sbjct: 141 SVLHLVLALRGGCF 154



 Score = 73.2 bits (178), Expect(2) = 5e-12
 Identities = 33/53 (62%), Positives = 44/53 (83%)
 Frame = -3

Query: 531 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 373
           I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55



 Score = 23.1 bits (48), Expect(2) = 5e-12
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 263 SVLHLVLALRGG 228
           S LHLVL LRGG
Sbjct: 65  STLHLVLRLRGG 76


>ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
           gi|356556999|ref|XP_003546806.1| PREDICTED:
           ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
           gi|255627501|gb|ACU14095.1| unknown [Glycine max]
          Length = 154

 Score =  143 bits (361), Expect(2) = 3e-34
 Identities = 72/73 (98%), Positives = 72/73 (98%)
 Frame = -3

Query: 591 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQR 412
           YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 411 LIYAGKQLADDKT 373
           LIYAGKQLADDKT
Sbjct: 119 LIYAGKQLADDKT 131



 Score = 27.3 bits (59), Expect(2) = 3e-34
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 263 SVLHLVLALRGGCF 222
           SVLHLVLALRGG +
Sbjct: 141 SVLHLVLALRGGTY 154



 Score = 73.2 bits (178), Expect(2) = 5e-12
 Identities = 33/53 (62%), Positives = 44/53 (83%)
 Frame = -3

Query: 531 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 373
           I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55



 Score = 23.1 bits (48), Expect(2) = 5e-12
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 263 SVLHLVLALRGG 228
           S LHLVL LRGG
Sbjct: 65  STLHLVLRLRGG 76