BLASTX nr result

ID: Coptis25_contig00004107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004107
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510159.1| conserved hypothetical protein [Ricinus comm...    69   6e-10
ref|XP_003611668.1| hypothetical protein MTR_5g016530 [Medicago ...    66   5e-09
ref|XP_002524921.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002278497.1| PREDICTED: uncharacterized protein LOC100243...    63   3e-08
emb|CAN59804.1| hypothetical protein VITISV_038876 [Vitis vinifera]    63   3e-08

>ref|XP_002510159.1| conserved hypothetical protein [Ricinus communis]
           gi|223550860|gb|EEF52346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 82

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = -3

Query: 579 ETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDETKGGVLSDATAAVTKTVQSAKDAIS 400
           ET VDT+DYR+PAG D+P +KENV ++H  K   E   GVL+   AAVT T++SAKDAI 
Sbjct: 16  ETTVDTIDYRTPAGADEP-RKENVGVVH-LKRNKEEDSGVLARTAAAVTNTIESAKDAIV 73

Query: 399 GHPTKESSK 373
           G    +++K
Sbjct: 74  GKSKDDTTK 82


>ref|XP_003611668.1| hypothetical protein MTR_5g016530 [Medicago truncatula]
           gi|355513003|gb|AES94626.1| hypothetical protein
           MTR_5g016530 [Medicago truncatula]
          Length = 76

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 34/60 (56%), Positives = 45/60 (75%)
 Frame = -3

Query: 579 ETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDETKGGVLSDATAAVTKTVQSAKDAIS 400
           E +V+TVD+RS AG+ Q  ++ NVQ+IHQ  P  +T GGVL+ A AA+  T+QSAKDAIS
Sbjct: 17  EKKVETVDHRSSAGQGQGQEERNVQVIHQ--PHSKTSGGVLTGAAAAMASTLQSAKDAIS 74


>ref|XP_002524921.1| conserved hypothetical protein [Ricinus communis]
           gi|223535756|gb|EEF37418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
 Frame = -3

Query: 579 ETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDE---TKGGVLSDATAAVTKTVQSAKD 409
           E  ++T+DYRS AG+ Q  +  NVQ+IHQ+ P  E   T GGVLS+A A+V  T+QSAK+
Sbjct: 19  EKRIETIDYRSSAGQGQEMR--NVQVIHQSNPNKEKSNTSGGVLSNAAASVASTLQSAKE 76

Query: 408 AIS 400
           AIS
Sbjct: 77  AIS 79


>ref|XP_002278497.1| PREDICTED: uncharacterized protein LOC100243912 [Vitis vinifera]
          Length = 78

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -3

Query: 579 ETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDETKGGVLSDATAAVTKTVQSAKDAIS 400
           ET VDTV+ RS  G+ Q  ++   +++HQ  PG  T GGVL DA AAV  T+QSAKDA+S
Sbjct: 19  ETRVDTVECRSSPGQVQETRR--AEVVHQPHPGSATTGGVLVDAAAAVANTLQSAKDAVS 76


>emb|CAN59804.1| hypothetical protein VITISV_038876 [Vitis vinifera]
          Length = 415

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -3

Query: 579 ETEVDTVDYRSPAGEDQPAKKENVQIIHQTKPGDETKGGVLSDATAAVTKTVQSAKDAIS 400
           ET VDTV+ RS  G+ Q  ++   +++HQ  PG  T GGVL DA AAV  T+QSAKDA+S
Sbjct: 356 ETRVDTVECRSSPGQVQETRR--AEVVHQPHPGSATTGGVLVDAAAAVANTLQSAKDAVS 413


Top