BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004096
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...   300   3e-79
ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vi...   295   2e-77
ref|XP_002333634.1| predicted protein [Populus trichocarpa] gi|2...   287   4e-75
ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-...   286   7e-75
ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-...   285   2e-74

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score =  300 bits (769), Expect = 3e-79
 Identities = 168/331 (50%), Positives = 214/331 (64%), Gaps = 17/331 (5%)
 Frame = -3

Query: 946 TTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPSTDDPR 767
           +T+I+S+H DII TH+LTRLDGPTLA+   ASSQLH L+  + LW +IC STWPS +DP 
Sbjct: 5   STTITSVHPDIIQTHILTRLDGPTLAAAGAASSQLHALATVDKLWRDICTSTWPSLNDPT 64

Query: 766 IRQFISNFPNGPRSFFSKSFPLLISHP----DPPSQNLNP--PSQTQELISAVDIHYQGK 605
           ++  +S FP G RSFFS S+PLL +HP       S+ + P   S T ELISAVDIHY+  
Sbjct: 65  LQALVSAFPGGHRSFFSDSYPLL-AHPLDQYHGQSRKIPPTTSSPTLELISAVDIHYKNS 123

Query: 604 SIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSIVQKRD----TRRDLFEELRLSWII 437
            IFSKV+  ET +GWF+CSPFR+DLLDPKD VPT +    D        L + L LSWI+
Sbjct: 124 LIFSKVEATETITGWFQCSPFRVDLLDPKDTVPTPVQYSVDGDYKWLSHLEDTLTLSWIL 183

Query: 436 INPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQVTD---VQCGIIVTF----G 278
           I+P  K+AAN SS RPVSV+RHWLT EVQVR+AT++G D+      VQCGI+VT     G
Sbjct: 184 IDPTRKRAANLSSLRPVSVKRHWLTGEVQVRYATVVGGDRTVGSEVVQCGIVVTCAGKEG 243

Query: 277 GEMQVREVSLQVENMDGINLNGKDSLGILEKAIXXXXXXXXXXXXXXXXXXXYVTXXXXX 98
           GEMQVREV+LQVE+M+G +LNGK+SL IL++A+                   Y+      
Sbjct: 244 GEMQVREVNLQVEDMEGRHLNGKESLVILQEALENGRRKKAKGEEGKARYERYLEMMGER 303

Query: 97  XXXXXXXXXRLDALCVAIGVSILASFWMLVL 5
                     LD +C+A+GV+I  SFW   L
Sbjct: 304 RERRLRREKTLDMVCIALGVTIFLSFWSYFL 334


>ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vinifera]
          Length = 342

 Score =  295 bits (754), Expect = 2e-77
 Identities = 158/275 (57%), Positives = 196/275 (71%), Gaps = 8/275 (2%)
 Frame = -3

Query: 979 TTTITMDEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNIC 800
           TTT  +  G+A     +LH DI+ TH+LTRLDGPTLAS SCA ++LH LS   +LW  IC
Sbjct: 11  TTTTVVQSGIA-----ALHPDILETHILTRLDGPTLASASCADTKLHALSTQPDLWITIC 65

Query: 799 LSTWPSTDDPRIRQFISNFPNGPRSFFSKSFPLLISHPDPPSQNLNPPSQTQELISAVDI 620
            STWPST  PR+   +S+FP+GPRSFFS S+P+L       S N +P +    LISAVDI
Sbjct: 66  TSTWPSTSTPRLLHLMSSFPDGPRSFFSSSYPIL-HRCTNSSTNSDPSAPPVRLISAVDI 124

Query: 619 HYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSIVQ--KRDTRRDLFEELRLS 446
           +Y  K I SKVQE ET + WFRCSPFRID+LDPKDVVPTSI      DT R L E + LS
Sbjct: 125 YYNEKPIISKVQETETATEWFRCSPFRIDVLDPKDVVPTSIQHPGDDDTSRKLGENISLS 184

Query: 445 WIIINPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQVTD--VQCGIIVTFG-- 278
           WI+++  G++AAN SS + VSV+RHWL+ EVQ+RFA+ILG D+ T   VQCGI+VT    
Sbjct: 185 WIVMDTTGRRAANLSSHKAVSVERHWLSGEVQLRFASILGGDKGTTELVQCGIVVTCDGS 244

Query: 277 --GEMQVREVSLQVENMDGINLNGKDSLGILEKAI 179
             GEMQV EVSLQ+E+MDG++L GK+SL IL KA+
Sbjct: 245 KTGEMQVTEVSLQLEDMDGVHLMGKESLVILHKAL 279


>ref|XP_002333634.1| predicted protein [Populus trichocarpa] gi|222837892|gb|EEE76257.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  287 bits (734), Expect = 4e-75
 Identities = 163/342 (47%), Positives = 210/342 (61%), Gaps = 12/342 (3%)
 Frame = -3

Query: 991  CYGDTTTITMDEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLW 812
            C  +T T T++  +AT SIS++H DI+  H+L RLDG +L ST+C S++L++L++ ++LW
Sbjct: 9    CSSNTATTTVEPSIAT-SISTIHPDILQAHILNRLDGLSLVSTACTSTELNSLASQQDLW 67

Query: 811  TNICLSTWPSTDDPRIRQFISNFPNGPRSFFSKSFPLLISHPDPPSQNLNPPSQTQELIS 632
            TNIC S WPST+ PRIR+ IS  P+G RS FS+SFPL       P ++ + PS   ELIS
Sbjct: 68   TNICHSIWPSTNTPRIREIISRLPSGWRSLFSESFPLTTGPRVNPPRDHDHPS---ELIS 124

Query: 631  AVDIHYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSIVQ--KRDTRRDLFEE 458
            AVDIHY+ K IFSKV E ET S WF CSPFRID+LDPKD  PT I      +T RDL  +
Sbjct: 125  AVDIHYKNKLIFSKVVETETSSSWFLCSPFRIDMLDPKDTCPTPIPNSGSEETCRDLAGD 184

Query: 457  LRLSWIIINPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQ----VTDVQCGII 290
            L LSWI+++P   ++ N SS +PVSVQRHWL+ EV  RFAT+L   +       VQCGI+
Sbjct: 185  LSLSWILLDPTRLRSVNLSSHKPVSVQRHWLSGEVHARFATVLAAGERGSASESVQCGIV 244

Query: 289  VTF-----GGEMQVREVSLQVENMDGINLNGKDSLGILEKAI-XXXXXXXXXXXXXXXXX 128
            VT      GGEMQVR VSLQVE+MDG+ LNGK SLG+L                      
Sbjct: 245  VTCGGGAQGGEMQVRGVSLQVEDMDGVFLNGKGSLGVLNTGFEGKKGMSGRREMEGRKRY 304

Query: 127  XXYVTXXXXXXXXXXXXXXRLDALCVAIGVSILASFWMLVLL 2
              ++                LD LCV+ GV +L S  +  LL
Sbjct: 305  GMFLEMKRERRERRLKKEGALDMLCVSFGVMVLVSLGLFHLL 346


>ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  286 bits (732), Expect = 7e-75
 Identities = 152/278 (54%), Positives = 195/278 (70%), Gaps = 17/278 (6%)
 Frame = -3

Query: 961 DEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPS 782
           D   A+TSIS +H DI+ TH+LTRLDGP LAS +C SS+LH L+ +  LW+ IC STWPS
Sbjct: 15  DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPS 74

Query: 781 TDDPRIRQFISNFPNGPRSFFSKSFPLLISHPDPPSQNLNPPSQ-------TQELISAVD 623
           T  PR+   IS FP+GPRSFFS S P   +H +  + +   P+          ELISAVD
Sbjct: 75  TTTPRLHALISEFPDGPRSFFSDSLPRGSNHSETSTSSPTSPATYCHRRHLPPELISAVD 134

Query: 622 IHYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSI---VQKRDTRRDLFEELR 452
           I+Y+G+ IFSKV E ET SGWFRCSPFRID+LDPKDVVPT I   + + +  R+L E+L 
Sbjct: 135 IYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPIKFPIGEGNACRELGEDLT 194

Query: 451 LSWIIINPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQVTD---VQCGIIVTF 281
           LSWI+I+  G++A N SS+R V V++HWL+ EV V F T+LG ++ T    V+CGI VT 
Sbjct: 195 LSWIVIDGAGRRAMNLSSYRAVKVEQHWLSGEVHVEFGTVLGGEKGTAAEWVKCGIAVTC 254

Query: 280 ----GGEMQVREVSLQVENMDGINLNGKDSLGILEKAI 179
               GG +QVREV+LQVE+MDG  L+GKDSL ILE+A+
Sbjct: 255 GGWEGGNLQVREVNLQVEDMDGTFLDGKDSLVILERAM 292


>ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  285 bits (728), Expect = 2e-74
 Identities = 151/278 (54%), Positives = 195/278 (70%), Gaps = 17/278 (6%)
 Frame = -3

Query: 961 DEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPS 782
           D   A+TSIS +H DI+ TH+LTRLDGP LAS +C SS+LH L+ +  LW+ IC STWPS
Sbjct: 15  DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPS 74

Query: 781 TDDPRIRQFISNFPNGPRSFFSKSFPLLISHPDPPSQNLNPPSQ-------TQELISAVD 623
           T  PR+   IS FP+GPRSFFS S P   +H +  + +   P+          ELISAVD
Sbjct: 75  TTTPRLHALISEFPDGPRSFFSDSLPRGSNHSETSTSSPTSPATYCHRRHLPPELISAVD 134

Query: 622 IHYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSI---VQKRDTRRDLFEELR 452
           I+Y+G+ IFSKV E ET SGWFRCSPFRID+LDPKDVVPT I   + + +  R+L E+L 
Sbjct: 135 IYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPIKFPIGEGNACRELGEDLT 194

Query: 451 LSWIIINPVGKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQVTD---VQCGIIVTF 281
           LSWI+I+  G++A N SS+R V V++HWL+ EV V F T+LG ++ T    V+CGI VT 
Sbjct: 195 LSWIVIDGAGRRAMNLSSYRAVKVEQHWLSGEVHVEFGTVLGGEKGTAAEWVKCGIAVTC 254

Query: 280 ----GGEMQVREVSLQVENMDGINLNGKDSLGILEKAI 179
               GG +QVREV+LQVE+MDG  L+GK+SL ILE+A+
Sbjct: 255 GGWEGGNLQVREVNLQVEDMDGTFLDGKESLVILERAM 292