BLASTX nr result

ID: Coptis25_contig00004093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004093
         (1425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263464.1| PREDICTED: uncharacterized protein LOC100265...   388   e-105
emb|CAN66425.1| hypothetical protein VITISV_007985 [Vitis vinifera]   368   2e-99
ref|XP_002511367.1| conserved hypothetical protein [Ricinus comm...   347   4e-93
ref|XP_002322176.1| predicted protein [Populus trichocarpa] gi|2...   345   1e-92
gb|ABK96116.1| unknown [Populus trichocarpa]                          339   1e-90

>ref|XP_002263464.1| PREDICTED: uncharacterized protein LOC100265372 [Vitis vinifera]
            gi|297733749|emb|CBI14996.3| unnamed protein product
            [Vitis vinifera]
          Length = 343

 Score =  388 bits (996), Expect = e-105
 Identities = 201/339 (59%), Positives = 247/339 (72%), Gaps = 9/339 (2%)
 Frame = +1

Query: 7    SYASFPSRSNLQTKEVKPNKQFVSLKLVGRLDRINFSNRRY--------CLRVQTNLPLK 162
            SYA+FP+RS+  TK +K  +   +  +VG+ D I+FS +R         C+RV    PLK
Sbjct: 11   SYATFPTRSHSWTKGIKLKQYVKTRHIVGKPD-ISFSLKRNLHLSVGTPCVRVPKRRPLK 69

Query: 163  VKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQ-NEETIAESPNTEQAPISYSS 339
            +      AFKGSA+N+ESGGR++ SK PKNSV+LSY PQ NEETI ESP ++  P+ YSS
Sbjct: 70   I-----CAFKGSAQNDESGGRASGSKSPKNSVRLSYAPQGNEETITESPKSQNVPLPYSS 124

Query: 340  GREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILXXXXXXXXXXXXTV 519
                 I GS AIQ LF+KWL MLRTQS +Q  D I  + P    IL             +
Sbjct: 125  EANGTIGGSLAIQNLFKKWLTMLRTQSPSQEVDEILGEGPAVKEILETQNEIQNKDRGEI 184

Query: 520  LKAAWCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGPVIVALYIKMLQ 699
            LKA W YFLG+D  +KI LLIFIP YLAVNV YG EVSKEL PLWVLGP+IVALYIKML+
Sbjct: 185  LKAVWFYFLGMDAVIKIPLLIFIPLYLAVNVAYGPEVSKELAPLWVLGPLIVALYIKMLR 244

Query: 700  GLCALYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVVDVKNLNYRKLF 879
            G+CALYVFSFKQTV+L+K+ PTY+LL Y Y+A GKLKE+  +RFWQPVVD+KNL+YR+L 
Sbjct: 245  GICALYVFSFKQTVKLVKNIPTYYLLAYTYIAHGKLKEDIQARFWQPVVDIKNLDYRELS 304

Query: 880  KRKLKALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 996
            +RKLK L++W +E+YLD+VESIWPYYCRTIRFLK+ANLI
Sbjct: 305  RRKLKDLQEWLLERYLDFVESIWPYYCRTIRFLKRANLI 343


>emb|CAN66425.1| hypothetical protein VITISV_007985 [Vitis vinifera]
          Length = 307

 Score =  368 bits (944), Expect = 2e-99
 Identities = 184/290 (63%), Positives = 220/290 (75%), Gaps = 1/290 (0%)
 Frame = +1

Query: 130 CLRVQTNLPLKVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQ-NEETIAESP 306
           C+RV    PLK+      AFKGSA+N+ESGGR++ SK PKNSV+LSY PQ NEETI ESP
Sbjct: 23  CVRVPKRRPLKI-----CAFKGSAQNDESGGRASGSKSPKNSVRLSYAPQGNEETITESP 77

Query: 307 NTEQAPISYSSGREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILXXX 486
            ++  P+ YSS     I GS AIQ LF+KWL MLRTQS +Q  D I  + P    IL   
Sbjct: 78  KSQNVPLPYSSEANGTIGGSLAIQNLFKKWLTMLRTQSPSQEVDEILGEGPAVKEILETQ 137

Query: 487 XXXXXXXXXTVLKAAWCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGP 666
                     +LKA W YFLG+D  +KI LLIFIP YLAVNV YG EVSKEL PLWV GP
Sbjct: 138 NEIQXKDRGEILKAVWFYFLGMDAVIKIPLLIFIPLYLAVNVAYGPEVSKELAPLWVXGP 197

Query: 667 VIVALYIKMLQGLCALYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVV 846
           +IVALYIKML+G+CALYVFSFKQTV+L+K+ PTY+LL Y Y+A GKLKE+  +RFWQPVV
Sbjct: 198 LIVALYIKMLRGICALYVFSFKQTVKLVKNIPTYYLLAYTYIAHGKLKEDIQARFWQPVV 257

Query: 847 DVKNLNYRKLFKRKLKALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 996
           D+KNL+YR+L +RKLK L++W +E+YLD+VESIWPYYCRTIRFLK+ANLI
Sbjct: 258 DIKNLDYRELSRRKLKDLQEWLLERYLDFVESIWPYYCRTIRFLKRANLI 307


>ref|XP_002511367.1| conserved hypothetical protein [Ricinus communis]
            gi|223550482|gb|EEF51969.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 343

 Score =  347 bits (890), Expect = 4e-93
 Identities = 181/335 (54%), Positives = 231/335 (68%), Gaps = 3/335 (0%)
 Frame = +1

Query: 1    QASYASFPSRSNLQTKEVKPNKQFVSLKLVGRLDRINFSNRRYCLRVQTNLP-LKVKHFK 177
            Q SY +FP R    TK  K  +   +L + GR+DR     R   L V   +   + K FK
Sbjct: 9    QGSYTTFPLRPFSWTKGFKLKQHVSTLHMFGRIDRRISVKRNLRLSVGACVHGPRTKFFK 68

Query: 178  VSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESPNTEQAPISYSSGREEN 354
            +SAFKG+A+N+ES  R N SK+   SVKLSY  +   ETI ESP     P+SY+S   E 
Sbjct: 69   ISAFKGTAQNDESRNRENGSKISHKSVKLSYAQKESGETIMESPKVHSVPVSYTSEANEG 128

Query: 355  IAGSPAIQKLFQKWLMMLRTQSTNQASDAIF-EDEPVQSGILXXXXXXXXXXXXTVLKAA 531
              GSPAI KLF+KWL MLRTQS NQ +D I  E  P   G               +LK  
Sbjct: 129  FNGSPAIHKLFKKWLNMLRTQSPNQVADEILGEGIPSSEGSEQTQTAAQTKESGEILKTV 188

Query: 532  WCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGPVIVALYIKMLQGLCA 711
            W +FLGLDTT+KI L++FIP YLAVNVVYG EVSKELTPLW+LGP+IVALYIKML+ L A
Sbjct: 189  WSHFLGLDTTIKIPLMVFIPLYLAVNVVYGVEVSKELTPLWILGPLIVALYIKMLRVLWA 248

Query: 712  LYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVVDVKNLNYRKLFKRKL 891
            LYVFSF+QTV+L+K+ PTY+L+  +Y+ +G+LKE+ ++R  QPV+++KNL+Y++L ++KL
Sbjct: 249  LYVFSFRQTVKLVKNLPTYYLVASSYITRGRLKEDVHARVVQPVINIKNLDYKELSRKKL 308

Query: 892  KALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 996
            K  E+W ++KY DYVESIWPYYCRTIRFLK+ANLI
Sbjct: 309  KEFEEWLLDKYFDYVESIWPYYCRTIRFLKRANLI 343


>ref|XP_002322176.1| predicted protein [Populus trichocarpa] gi|222869172|gb|EEF06303.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  345 bits (886), Expect = 1e-92
 Identities = 181/343 (52%), Positives = 237/343 (69%), Gaps = 11/343 (3%)
 Frame = +1

Query: 1    QASYASFPSRSNLQTKEVKPNKQFVSLKLVGRLDRINFSNRRYCLRVQTNLPL------- 159
            Q SYA+FPSR    +K VK  ++   L++VGR D         C  V+ +L L       
Sbjct: 9    QGSYATFPSRPLSWSKGVKLKQRVTELQMVGRTDM--------CFSVKHSLRLSAGAFSH 60

Query: 160  --KVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESPNTEQAPIS 330
              KVK  +VSAFKGSA+N+ESGGR+N SK+ K SVKLSYVP+   ET+ +S      P+S
Sbjct: 61   GPKVKLLRVSAFKGSAQNDESGGRANGSKVSKKSVKLSYVPKESGETMMDSSKVHSIPVS 120

Query: 331  YSSGREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFED-EPVQSGILXXXXXXXXXX 507
            Y+S  +E IAGSPAI KLF+KWL MLRTQS +Q +D I E+  P +  +           
Sbjct: 121  YTSEADERIAGSPAINKLFKKWLSMLRTQSPSQVADEILEEGPPPREELQQAQNTTQNKE 180

Query: 508  XXTVLKAAWCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGPVIVALYI 687
                +K+ W +FL LD T+KI +L FIP +LAVNVVYGA VSKELTPLW+LGP+IVA YI
Sbjct: 181  RVDNVKSVWYHFLNLDATIKIPILTFIPLFLAVNVVYGAGVSKELTPLWILGPLIVAFYI 240

Query: 688  KMLQGLCALYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVVDVKNLNY 867
            K+LQGL ALYVFSF+QT++++K+ PTY+L+ Y Y+ QGKLKE+  +R  QP+   KNL+ 
Sbjct: 241  KLLQGLWALYVFSFRQTIKVIKNVPTYYLVAYGYIRQGKLKEDIQARVLQPLQSFKNLDR 300

Query: 868  RKLFKRKLKALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 996
            ++  ++K+  L++W +EKYLDYVESIWPYYCR IRFLK+ANLI
Sbjct: 301  KEFSRKKMMELQEWCMEKYLDYVESIWPYYCRAIRFLKRANLI 343


>gb|ABK96116.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  339 bits (869), Expect = 1e-90
 Identities = 178/335 (53%), Positives = 226/335 (67%), Gaps = 3/335 (0%)
 Frame = +1

Query: 1    QASYASFPSRSNLQTKEVKPNKQFVSLKLVGRLDRINFSNRRYCLRVQTNLPL--KVKHF 174
            Q SYA+FPSR    +K VK     ++L++ GR +   FS +R  L       L  KVK  
Sbjct: 9    QGSYATFPSRPLSWSKGVKLKPHVMTLQMFGRTNMC-FSVKRSLLLSAGAFALGPKVKLL 67

Query: 175  KVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESPNTEQAPISYSSGREE 351
            ++SAFKGSA+N+ESGGR N SK+ KN VKLSYVP+   ETI  S      P+SY+S    
Sbjct: 68   RISAFKGSAQNDESGGRKNGSKVSKNYVKLSYVPKESGETIINSSKVHTIPVSYTSEANN 127

Query: 352  NIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILXXXXXXXXXXXXTVLKAA 531
             IAGSPAI KLF+KWL MLRTQS +Q +D I E  P    +              ++K  
Sbjct: 128  RIAGSPAINKLFKKWLSMLRTQSPSQVADEILEGPPPSEELQQAQNSTQNKERVEIVKLV 187

Query: 532  WCYFLGLDTTVKILLLIFIPWYLAVNVVYGAEVSKELTPLWVLGPVIVALYIKMLQGLCA 711
            WC FL LD T+KI +L FIP  LA+NV+YGA VSKELTPLW+LGP+IVA+YIK+ QGL A
Sbjct: 188  WCRFLILDATIKIPILTFIPLVLAINVIYGAGVSKELTPLWILGPLIVAIYIKLFQGLWA 247

Query: 712  LYVFSFKQTVRLLKSSPTYFLLVYNYVAQGKLKEEFYSRFWQPVVDVKNLNYRKLFKRKL 891
            LYVFSF+QTV+L+K+ P Y+L+   Y+ QGKLK++      QPV+ +KNL+ ++  ++K 
Sbjct: 248  LYVFSFRQTVKLIKNVPAYYLVASGYIRQGKLKDDMQVHVLQPVLHIKNLDRKEFSRKKT 307

Query: 892  KALEQWAVEKYLDYVESIWPYYCRTIRFLKKANLI 996
            K L++W  EKYLDYVESIWPYYCR IRFLKKANLI
Sbjct: 308  KELQEWLTEKYLDYVESIWPYYCRAIRFLKKANLI 342


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