BLASTX nr result

ID: Coptis25_contig00004082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004082
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539578.1| PREDICTED: probable disease resistance prote...    85   5e-15
gb|ABF81422.1| NBS type disease resistance protein [Populus tric...    83   3e-14
ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichoca...    77   1e-12
ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    76   2e-12

>ref|XP_003539578.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Glycine max]
          Length = 962

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/79 (54%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
 Frame = -2

Query: 231 MLCQKDVKVEPLSKDEAWELFLVNVGEE--LVPDVEEIAKEVVAECCGLPLAIITIGRAM 58
           M CQ +VKVEPL+K+EAW LFL N+G++  L P+V ++A+ V  EC GLPLAIIT+ R+M
Sbjct: 285 MNCQNNVKVEPLAKEEAWTLFLDNLGQQTTLSPEVTKVARSVAKECAGLPLAIITMARSM 344

Query: 57  RSKDVGDVDEWRVALSDLK 1
           R   V ++ EWR AL +L+
Sbjct: 345 RG--VEEICEWRHALEELR 361


>gb|ABF81422.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 652

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/77 (58%), Positives = 53/77 (68%)
 Frame = -2

Query: 231 MLCQKDVKVEPLSKDEAWELFLVNVGEELVPDVEEIAKEVVAECCGLPLAIITIGRAMRS 52
           M CQK +KVEPLS +EAW LF+  +G  + P+VEEIAK V +EC GLPL IIT+   MR 
Sbjct: 396 MFCQKTIKVEPLSMEEAWALFMKVLGC-IPPEVEEIAKSVASECAGLPLGIITMAGTMRG 454

Query: 51  KDVGDVDEWRVALSDLK 1
            D  D  EWR AL DLK
Sbjct: 455 VD--DRCEWRNALEDLK 469


>ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862588|gb|EEF00095.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 929

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
 Frame = -2

Query: 222 QKDVKVEPLSKDEAWELFLVNVGEE--LVPDVEEIAKEVVAECCGLPLAIITIGRAMRSK 49
           Q  +KVEP+SK+EAW LF+  +G +  L P+VE+IAK V  EC GLPL +IT+   MR  
Sbjct: 190 QHIIKVEPISKEEAWALFIERLGHDTALSPEVEQIAKSVARECAGLPLGVITMAATMRG- 248

Query: 48  DVGDVDEWRVALSDLK 1
            V DV EWR AL +L+
Sbjct: 249 -VVDVREWRNALEELR 263


>ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|222834655|gb|EEE73118.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
 Frame = -2

Query: 222 QKDVKVEPLSKDEAWELFLVNVGEE--LVPDVEEIAKEVVAECCGLPLAIITIGRAMRSK 49
           Q  +KV+P+SK+EAW LF+  +G +  L P+VE+IAK V  EC GLPL IIT+   MR  
Sbjct: 4   QHIIKVKPISKEEAWALFIERLGHDTALSPEVEQIAKSVARECAGLPLGIITMAATMRG- 62

Query: 48  DVGDVDEWRVALSDLK 1
            V DV EWR AL +LK
Sbjct: 63  -VVDVREWRNALEELK 77


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
 Frame = -2

Query: 231 MLCQKDVKVEPLSKDEAWELFLVNVGE--ELVPDVEEIAKEVVAECCGLPLAIITIGRAM 58
           M CQK +KVE L+K+EAW LF+  +G   +L P+V +IAK V AEC  LPL II +  +M
Sbjct: 369 MGCQKSIKVELLTKEEAWTLFVEKLGNYADLSPEVADIAKSVAAECACLPLGIIAMAGSM 428

Query: 57  RSKDVGDVDEWRVALSDLK 1
           R  +V D+ EWR AL++LK
Sbjct: 429 R--EVNDLYEWRNALTELK 445


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