BLASTX nr result

ID: Coptis25_contig00004076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004076
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
gb|ABK95529.1| unknown [Populus trichocarpa]                           97   2e-18
ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...    96   2e-18
emb|CBI16056.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...    91   7e-17

>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/56 (75%), Positives = 51/56 (91%)
 Frame = +3

Query: 81  GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248
           G+K DE KIAGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLAQPPE+F+D
Sbjct: 116 GAKADETKIAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFID 170


>gb|ABK95529.1| unknown [Populus trichocarpa]
          Length = 194

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/56 (75%), Positives = 51/56 (91%)
 Frame = +3

Query: 81  GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248
           G+K DE KIAGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLAQPPE+F+D
Sbjct: 16  GAKADETKIAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFID 70


>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 41/56 (73%), Positives = 51/56 (91%)
 Frame = +3

Query: 81  GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248
           G+K DE K+AGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLAQPPE+F+D
Sbjct: 115 GTKADEAKMAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFID 169


>emb|CBI16056.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 39/56 (69%), Positives = 48/56 (85%)
 Frame = +3

Query: 81  GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248
           GSK +E K+AGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLA P E F+D
Sbjct: 16  GSKAEESKVAGDSLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFID 70


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 39/56 (69%), Positives = 48/56 (85%)
 Frame = +3

Query: 81  GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248
           GSK +E K+AGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLA P E F+D
Sbjct: 119 GSKAEESKVAGDSLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFID 173


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