BLASTX nr result
ID: Coptis25_contig00004076
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00004076 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-18 gb|ABK95529.1| unknown [Populus trichocarpa] 97 2e-18 ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1... 96 2e-18 emb|CBI16056.3| unnamed protein product [Vitis vinifera] 91 7e-17 ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation... 91 7e-17 >ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1| predicted protein [Populus trichocarpa] Length = 294 Score = 96.7 bits (239), Expect = 2e-18 Identities = 42/56 (75%), Positives = 51/56 (91%) Frame = +3 Query: 81 GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248 G+K DE KIAGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLAQPPE+F+D Sbjct: 116 GAKADETKIAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFID 170 >gb|ABK95529.1| unknown [Populus trichocarpa] Length = 194 Score = 96.7 bits (239), Expect = 2e-18 Identities = 42/56 (75%), Positives = 51/56 (91%) Frame = +3 Query: 81 GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248 G+K DE KIAGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLAQPPE+F+D Sbjct: 16 GAKADETKIAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFID 70 >ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1| unknown [Populus trichocarpa] gi|222851937|gb|EEE89484.1| predicted protein [Populus trichocarpa] Length = 293 Score = 96.3 bits (238), Expect = 2e-18 Identities = 41/56 (73%), Positives = 51/56 (91%) Frame = +3 Query: 81 GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248 G+K DE K+AGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLAQPPE+F+D Sbjct: 115 GTKADEAKMAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFID 169 >emb|CBI16056.3| unnamed protein product [Vitis vinifera] Length = 193 Score = 91.3 bits (225), Expect = 7e-17 Identities = 39/56 (69%), Positives = 48/56 (85%) Frame = +3 Query: 81 GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248 GSK +E K+AGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLA P E F+D Sbjct: 16 GSKAEESKVAGDSLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFID 70 >ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B [Vitis vinifera] Length = 296 Score = 91.3 bits (225), Expect = 7e-17 Identities = 39/56 (69%), Positives = 48/56 (85%) Frame = +3 Query: 81 GSKPDEGKIAGDPMSNLGKGGGAVLMVCRTCGKRGDHWTAQCPFKDLAQPPESFVD 248 GSK +E K+AGD ++ LGKGG AVLMVCRTCGK+GDHWT++CP+KDLA P E F+D Sbjct: 119 GSKAEESKVAGDSLAQLGKGG-AVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFID 173