BLASTX nr result

ID: Coptis25_contig00004073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004073
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516170.1| hypothetical protein RCOM_0708150 [Ricinus c...    75   4e-12
ref|XP_002308507.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
emb|CBI20749.3| unnamed protein product [Vitis vinifera]               57   1e-06

>ref|XP_002516170.1| hypothetical protein RCOM_0708150 [Ricinus communis]
           gi|223544656|gb|EEF46172.1| hypothetical protein
           RCOM_0708150 [Ricinus communis]
          Length = 425

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/72 (56%), Positives = 51/72 (70%)
 Frame = -1

Query: 225 NKLKDQEQPHLSGAYIRSLVKQLSSSRTKNSPMNQKALDTIDGHGVTQKTTRCSSDGLSE 46
           NKLK  E+PHLSGAYIRSLVKQL+SSRTK+ PMN K    +D    + +      +G+SE
Sbjct: 20  NKLK--EEPHLSGAYIRSLVKQLTSSRTKD-PMNSKDRSCVDDDSFSGQNMAKFGEGVSE 76

Query: 45  NQKIHQPQQPEQ 10
           NQ+  QPQQP+Q
Sbjct: 77  NQQTQQPQQPQQ 88


>ref|XP_002308507.1| predicted protein [Populus trichocarpa] gi|222854483|gb|EEE92030.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/72 (59%), Positives = 50/72 (69%)
 Frame = -1

Query: 216 KDQEQPHLSGAYIRSLVKQLSSSRTKNSPMNQKALDTIDGHGVTQKTTRCSSDGLSENQK 37
           K +E+PHLSGAYIRSLVKQL+SSRTK+ PMN K      GHG         SDGLS+NQK
Sbjct: 8   KLKEEPHLSGAYIRSLVKQLTSSRTKD-PMNPK------GHG------SADSDGLSKNQK 54

Query: 36  IHQPQQPEQPKK 1
             QPQ+P+  KK
Sbjct: 55  SQQPQEPQPHKK 66


>emb|CBI20749.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/72 (50%), Positives = 42/72 (58%)
 Frame = -1

Query: 216 KDQEQPHLSGAYIRSLVKQLSSSRTKNSPMNQKALDTIDGHGVTQKTTRCSSDGLSENQK 37
           K +E+PHLSGAYIRSLVKQL+SSRTK+ PMN K  DT                      +
Sbjct: 8   KLKEEPHLSGAYIRSLVKQLTSSRTKD-PMNPKDSDT----------------------Q 44

Query: 36  IHQPQQPEQPKK 1
            HQ QQP+Q KK
Sbjct: 45  AHQTQQPQQHKK 56


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