BLASTX nr result

ID: Coptis25_contig00004065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004065
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300034.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003553827.1| PREDICTED: uncharacterized protein LOC100778...    89   3e-16
ref|XP_003524546.1| PREDICTED: uncharacterized protein LOC100784...    88   8e-16
emb|CBI34913.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002277585.1| PREDICTED: uncharacterized protein LOC100264...    85   7e-15

>ref|XP_002300034.1| predicted protein [Populus trichocarpa] gi|222847292|gb|EEE84839.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 59/137 (43%), Positives = 72/137 (52%), Gaps = 26/137 (18%)
 Frame = +2

Query: 5   ILDSLPALVDRFRQLKTKEANFLVQNKAMYGDKKHLSQ---------------------- 118
           ILD L  L +RF+ LK KEA+ LVQNKA+YGDK+ +SQ                      
Sbjct: 290 ILDGLSPLGERFKILKAKEADLLVQNKALYGDKEQISQQEYIRGISAWNFNLEDLKNQAA 349

Query: 119 -IQDFD---EIPTDDLDNKHNDGYDDVCFSEQLLSPIKANGSDSAPKQEDELNDLQNVED 286
            IQD+D        DL  K  D Y+ V F  + L P  AN S SAP QED  NDL ++E 
Sbjct: 350 LIQDYDCMSNAEDPDLSGKQMDRYNIVGFPAEKLPPKIANHSISAPSQEDGFNDLHDLET 409

Query: 287 SLASFPTLPLRLIKFFF 337
           SL SFP  PL+ +K  F
Sbjct: 410 SLPSFPIKPLQALKGCF 426


>ref|XP_003553827.1| PREDICTED: uncharacterized protein LOC100778837 isoform 1 [Glycine
           max]
          Length = 671

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 65/148 (43%), Positives = 78/148 (52%), Gaps = 28/148 (18%)
 Frame = +2

Query: 2   TILDSLPALVDRFRQLKTKEANFLVQNKAMYGDKKHLSQ--------------------- 118
           TIL+ L  L DRFR LK K+A+ LVQNKA+Y DK  LSQ                     
Sbjct: 289 TILEGLAPLGDRFRLLKAKQADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQA 348

Query: 119 --IQDFDEIPT---DDLDNKHNDGYDDVCFSEQLLSPIKANGSDSAPKQ--EDELNDLQN 277
             IQD D+IP       D K  D  DD   S + LSP  AN SD AP Q  ED  N+L +
Sbjct: 349 ALIQD-DDIPNAEESQRDKKQKDRLDDFKVSAERLSPGAANHSDDAPTQDKEDGFNNLPD 407

Query: 278 VEDSLASFPTLPLRLIKFFFFFLCEGQV 361
           +E SLASFP+ PL+ +K   F +CE  V
Sbjct: 408 LESSLASFPSKPLQALK-GCFDMCEDDV 434


>ref|XP_003524546.1| PREDICTED: uncharacterized protein LOC100784402 [Glycine max]
          Length = 669

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 64/148 (43%), Positives = 78/148 (52%), Gaps = 28/148 (18%)
 Frame = +2

Query: 2   TILDSLPALVDRFRQLKTKEANFLVQNKAMYGDKKHLSQ--------------------- 118
           TIL+ L  L DRFR LK KEA+ LVQNKA+Y DK  LSQ                     
Sbjct: 289 TILEGLAPLGDRFRMLKAKEADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQA 348

Query: 119 --IQDFDEIPTDD---LDNKHNDGYDDVCFSEQLLSPIKANGSDSAPKQ--EDELNDLQN 277
             IQD D+IP  +    D K  D  D+   S + LS   AN SD AP Q  ED  N+LQ+
Sbjct: 349 ALIQD-DDIPNAEEPQRDKKQKDRLDNFKVSAERLSAGAANHSDDAPTQDKEDGFNNLQD 407

Query: 278 VEDSLASFPTLPLRLIKFFFFFLCEGQV 361
           +E SL SFPT PL+ +K   F +CE  +
Sbjct: 408 LEGSLVSFPTKPLQALK-GCFDMCEDDI 434


>emb|CBI34913.3| unnamed protein product [Vitis vinifera]
          Length = 600

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   TILDSLPALVDRFRQLKTKEANFLVQNKAMYGDKKHLSQIQDFDEIPTDDLDNKHNDGYD 181
           TIL+ L  L DRFR LK KEA+ LVQNKA+YGDK+ LSQ +    I   + + +      
Sbjct: 287 TILEGLTPLGDRFRTLKAKEADLLVQNKALYGDKEQLSQQEYIRGISAWNFNLEDLKNQA 346

Query: 182 DVCFSEQLLSPI-KANGSDSAPKQEDELNDLQNVEDSLASFPTLPLRLIKFFF 337
            +     ++S +   + S++AP  ED LNDL N+E+SLASFP  PL+ +K +F
Sbjct: 347 ALIQDYDVISNVDDPDCSNAAPSHEDGLNDLSNLENSLASFPIQPLQALKGYF 399


>ref|XP_002277585.1| PREDICTED: uncharacterized protein LOC100264532 [Vitis vinifera]
          Length = 662

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   TILDSLPALVDRFRQLKTKEANFLVQNKAMYGDKKHLSQIQDFDEIPTDDLDNKHNDGYD 181
           TIL+ L  L DRFR LK KEA+ LVQNKA+YGDK+ LSQ +    I   + + +      
Sbjct: 287 TILEGLTPLGDRFRTLKAKEADLLVQNKALYGDKEQLSQQEYIRGISAWNFNLEDLKNQA 346

Query: 182 DVCFSEQLLSPI-KANGSDSAPKQEDELNDLQNVEDSLASFPTLPLRLIKFFF 337
            +     ++S +   + S++AP  ED LNDL N+E+SLASFP  PL+ +K +F
Sbjct: 347 ALIQDYDVISNVDDPDCSNAAPSHEDGLNDLSNLENSLASFPIQPLQALKGYF 399


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