BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004064
         (6196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   877   0.0  
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              841   0.0  
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...   820   0.0  
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...   801   0.0  
ref|XP_003530482.1| PREDICTED: RNA polymerase II C-terminal doma...   801   0.0  

>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  877 bits (2265), Expect = 0.0
 Identities = 556/1172 (47%), Positives = 684/1172 (58%), Gaps = 16/1172 (1%)
 Frame = -1

Query: 3976 EAEFEKRICLILEALDTVTVSDAEKCFGEVCSRLRTALDTLQLI-----VSESGLSVVGG 3812
            E E  +R+  I E L++VTV +AEK F  VCSRL+  L +LQ +     V ES +     
Sbjct: 179  ERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDA 238

Query: 3811 ITDQCFVGFEDVNSVFNSMNPKEKGQNKQVFTSLLAHMKNQVPSLFSAEQMEEVQAVLHS 3632
            +  Q       +N VF SMN  +K  NK VF+ LL+ ++     +FS + ++EV+ ++  
Sbjct: 239  LAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSF 298

Query: 3631 LDPPPSISLGVKDMEVEREVPVNNDVKSELGILGEKPVKSVNELGILGQKPGKDLGILGE 3452
            LD P + S      +V       NDV+   G+       SV                  E
Sbjct: 299  LDTPAAQSSAEASDKV-------NDVQVTDGMNRNILDSSV------------------E 333

Query: 3451 KPGQMFNSLKVVPLEPSSTKLGDQNNAYMGSQYLKQGLTSGIRGRGSFGPLLDLHRDHDV 3272
              G+ F S K + L+  S +  +QNN       LK GL+S  RGR  FGPLLDLH+DHD 
Sbjct: 334  SSGRAFASAKKLSLDSISVESYNQNNP----DALKPGLSSS-RGRFIFGPLLDLHKDHDE 388

Query: 3271 DSLPSPTREAPPPLHFRKQQVDGDRSIKAESKPKVANKKSEDASVHFYETDALKAVSTYQ 3092
            DSLPSPT +AP      K ++            KVA++ ++D+ +H YETDALKAVSTYQ
Sbjct: 389  DSLPSPTGKAPQCFPVNKSEL---------VTAKVAHE-TQDSIMHPYETDALKAVSTYQ 438

Query: 3091 QKFGRNSFLLSNRLPSPTPXXXXXXXXXXXXXXXXXXXXXXNARAVNPLMPPQAVVSVTE 2912
            QKFG  SFL  ++LPSPTP                           N       +VS   
Sbjct: 439  QKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAP 498

Query: 2911 HMDKSGGQGVMPVKTMGQIASRPN--SHGRASSKSRDPRLRLANPEGGTLDPNARPL--L 2744
             MD S  QG    +    ++S P+  S   AS+KSRDPRLRLA+ + G+LD N RPL  +
Sbjct: 499  QMDSSIVQGPTVGRNTSLVSSGPHLDSSVVASAKSRDPRLRLASSDAGSLDLNERPLPAV 558

Query: 2743 KDTPKNEHVAGVLNSRKNKNDGDIIGDGRTVKKQRNGVGNWEVSRENCSSVGTPVIDRIQ 2564
             ++PK + +  +++SRK K+  + + DG   K+QRNG+ +    R+  + V +       
Sbjct: 559  SNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVAS------- 611

Query: 2563 STENRGDPRKGDPRKSVIGGIFSGQRQGSTTGIFNPVTGGPQQLPVTGSTPQSLPSIGTF 2384
                                   G  + S T +   +    Q +  TG+ P+ L S  T 
Sbjct: 612  ----------------------GGWLEDSNT-VIPQMMNRNQLIENTGTDPKKLESKVT- 647

Query: 2383 NPITGGLQNLPVIGSTPHSLPSIGTFNPIT--GGPQQLPVIG-STTQPLPSLLKDIAVDP 2213
              +TG                 IG   P     G + LPV+  STT  L SLLKDIAV+P
Sbjct: 648  --VTG-----------------IGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNP 688

Query: 2212 ALLMQLIMEQQRLQAEAQKSSNLPQSRMPAFSSSFTPGAAPLVTTAQSKSSGVEQKPLEK 2033
            A+ M +  +      E QKS +  ++ +   +S+   G  P  + A  K S + QKP   
Sbjct: 689  AVWMNIFNK-----VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGA 743

Query: 2032 QQTLPSMNLQGELG-VRMKPRDPRRILHSSTFQTNESFGSTQFKTNGSLTSNSQASKDNM 1856
             Q +P      E G VRMKPRDPRRILH+++FQ + S GS QFKTN              
Sbjct: 744  LQ-VPQTGPMDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNA------------- 789

Query: 1855 SGRQQSQQGDATSLPTHSSPPPDITRQFTKNLRNLADIIS-SQPTDTVPTDPQSAPSSLS 1679
              ++Q  Q +  S+P+HS  PPDI++QFTKNL+N+AD++S SQ +   PT PQ   SS S
Sbjct: 790  --QKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQIL-SSQS 846

Query: 1678 MPVKAEQADLPMTAST--DQHIGPFLRPAXXXXXXXXXXXTWGDVEHLFEGYDXXXXXXX 1505
            + V  ++ D+  T S   DQ      +P             WGDVEHLF+GYD       
Sbjct: 847  VQVNTDRMDVKATVSDSGDQLTANGSKPESAAGPPQSKNT-WGDVEHLFDGYDDQQKAAI 905

Query: 1504 XXXXXXXXXXQNTLFAAKKXXXXXXXXXXXLNSAKFVEVDPVHEEILRKKEEQDREKPHR 1325
                      Q  +F+A+K           LNSAKFVEVDPVH+EILRKKEEQDREK  R
Sbjct: 906  QRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQR 965

Query: 1324 HLFRFSHMGMWTKLRPGIWTFLEKASKLYELHLYTMGNKLYATEMAKVLDPSGVLFSGRV 1145
            HLFRF HMGMWTKLRPGIW FLEKASKLYELHLYTMGNKLYATEMAKVLDP GVLF+GRV
Sbjct: 966  HLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRV 1025

Query: 1144 ISKGDDGDPFDGDEKIPKSKDLEGVLGMEXXXXXXXXXXXVWPHNKLNLILVERYTYFPC 965
            ISKGDDGD  DGDE++PKSKDLEGVLGME           VWPHNKLNLI+VERYTYFPC
Sbjct: 1026 ISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPC 1085

Query: 964  SRRQFGLPGPSLLEIDHDERPEDGTLASSLTVIERIHQNFFSNLSLKEVDVRNILASEQR 785
            SRRQFGLPGPSLLEIDHDERPEDGTLASSL VIERIHQ+FFSN +L EVDVRNILASEQR
Sbjct: 1086 SRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQR 1145

Query: 784  KILAGCRIVFSRIFPVGETKPHQHPLWQTAEQFGAVCTTQIDNLVTHVVANSLGTDKVNW 605
            KILAGCRIVFSR+FPVGE  PH HPLWQTAE FGAVCT QID  VTHVVANSLGTDKVNW
Sbjct: 1146 KILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNW 1205

Query: 604  ALSTGRFVVHPGWVEASALLYRRASENDFAVK 509
            ALSTGRFVVHPGWVEASALLYRRA+E DFA+K
Sbjct: 1206 ALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1237


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  841 bits (2172), Expect = 0.0
 Identities = 547/1169 (46%), Positives = 656/1169 (56%), Gaps = 13/1169 (1%)
 Frame = -1

Query: 3976 EAEFEKRICLILEALDTVTVSDAEKCFGEVCSRLRTALDTLQLI-----VSESGLSVVGG 3812
            E E  +R+  I E L++VTV +AEK F  VCSRL+  L +LQ +     V ES +     
Sbjct: 190  ERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDA 249

Query: 3811 ITDQCFVGFEDVNSVFNSMNPKEKGQNKQVFTSLLAHMKNQVPSLFSAEQMEEVQAVLHS 3632
            +  Q       +N VF SMN  +K  NK VF+ LL+ ++     +FS + ++EV+ ++  
Sbjct: 250  LAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSF 309

Query: 3631 LDPPPSISLGVKDMEVEREVPVNNDVKSELGILGEKPVKSVNELGILGQKPGKDLGILGE 3452
            LD P + S      +V       NDV+   G+       SV                  E
Sbjct: 310  LDTPAAQSSAEASDKV-------NDVQVTDGMNRNILDSSV------------------E 344

Query: 3451 KPGQMFNSLKVVPLEPSSTKLGDQNNAYMGSQYLKQGLTSGIRGRGSFGPLLDLHRDHDV 3272
              G+ F S K                                RGR  FGPLLDLH+DHD 
Sbjct: 345  SSGRAFASAKK------------------------------FRGRFIFGPLLDLHKDHDE 374

Query: 3271 DSLPSPTREAPPPLHFRKQQVDGDRSIKAESKPKVANKKSEDASVHFYETDALKAVSTYQ 3092
            DSLPSPT +AP      K ++            KVA++ ++D+ +H YETDALKAVSTYQ
Sbjct: 375  DSLPSPTGKAPQCFPVNKSEL---------VTAKVAHE-TQDSIMHPYETDALKAVSTYQ 424

Query: 3091 QKFGRNSFLLSNRLPSPTPXXXXXXXXXXXXXXXXXXXXXXNARAVNPLMPPQAVVSVTE 2912
            QKFG  SFL  ++LPSPTP                           N       +VS   
Sbjct: 425  QKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAP 484

Query: 2911 HMDKSGGQGVMPVKTMGQIASRPNSHGRASSKSRDPRLRLANPEGGTLDPNARPLLKDTP 2732
             MD    QG++  +  G + SR NS  RAS+KSRDPRLRLA+ + G+LD N RPL     
Sbjct: 485  QMDIV--QGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPL----- 537

Query: 2731 KNEHVAGVLNSRKNKNDGDIIGDGRTVKKQRNGVGNWEVSRENCSSVGTPVIDRIQSTEN 2552
                   V NS K    G+I+      +KQ+              S   P++D       
Sbjct: 538  -----PAVSNSPKVDPLGEIVSS----RKQK--------------SAEEPLLD------- 567

Query: 2551 RGDPRKGDPRKSVIGGIFSGQRQGSTTGIFNPVTGGPQQLPVTGSTPQSLPSIGTFNPIT 2372
                          G +   QR G T+    P T    ++ VTG        IG   P  
Sbjct: 568  --------------GPVTKRQRNGLTS----PATKLESKVTVTG--------IGCDKPYV 601

Query: 2371 GGLQNLPVIGSTPHSLPSIGTFNPITGGPQQLPVIG-STTQPLPSLLKDIAVDPALLMQL 2195
                                       G + LPV+  STT  L SLLKDIAV+PA+ M +
Sbjct: 602  ------------------------TVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNI 637

Query: 2194 IMEQQRLQAEAQKSSNLPQSRMPAFSSSFTPGAAPLVTTAQSKSSGVEQKP---LEKQQT 2024
              +      E QKS +  ++ +   +S+   G  P  + A  K S + QKP   L+  QT
Sbjct: 638  FNK-----VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQT 692

Query: 2023 LPSMNLQGELG-VRMKPRDPRRILHSSTFQTNESFGSTQFKTNGSLTSNSQASKDNMSGR 1847
             P MN Q E G VRMKPRDPRRILH+++FQ + S GS QFKTN                +
Sbjct: 693  GP-MNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNA---------------Q 736

Query: 1846 QQSQQGDATSLPTHSSPPPDITRQFTKNLRNLADIIS-SQPTDTVPTDPQSAPSSLSMPV 1670
            +Q  Q +  S+P+HS  PPDI++QFTKNL+N+AD++S SQ +   PT PQ   SS S+ V
Sbjct: 737  KQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQIL-SSQSVQV 795

Query: 1669 KAEQADLPMTAST--DQHIGPFLRPAXXXXXXXXXXXTWGDVEHLFEGYDXXXXXXXXXX 1496
              ++ D+  T S   DQ      +P             WGDVEHLF+GYD          
Sbjct: 796  NTDRMDVKATVSDSGDQLTANGSKPESAAGPPQSKNT-WGDVEHLFDGYDDQQKAAIQRE 854

Query: 1495 XXXXXXXQNTLFAAKKXXXXXXXXXXXLNSAKFVEVDPVHEEILRKKEEQDREKPHRHLF 1316
                   Q  +F+A+K           LNSAKFVEVDPVH+EILRKKEEQDREK  RHLF
Sbjct: 855  RARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLF 914

Query: 1315 RFSHMGMWTKLRPGIWTFLEKASKLYELHLYTMGNKLYATEMAKVLDPSGVLFSGRVISK 1136
            RF HMGMWTKLRPGIW FLEKASKLYELHLYTMGNKLYATEMAKVLDP GVLF+GRVISK
Sbjct: 915  RFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISK 974

Query: 1135 GDDGDPFDGDEKIPKSKDLEGVLGMEXXXXXXXXXXXVWPHNKLNLILVERYTYFPCSRR 956
            GDDGD  DGDE++PKSKDLEGVLGME           VWPHNKLNLI+VERYTYFPCSRR
Sbjct: 975  GDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 1034

Query: 955  QFGLPGPSLLEIDHDERPEDGTLASSLTVIERIHQNFFSNLSLKEVDVRNILASEQRKIL 776
            QFGLPGPSLLEIDHDERPEDGTLASSL VIERIHQ+FFSN +L EVDVRNILASEQRKIL
Sbjct: 1035 QFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKIL 1094

Query: 775  AGCRIVFSRIFPVGETKPHQHPLWQTAEQFGAVCTTQIDNLVTHVVANSLGTDKVNWALS 596
            AGCRIVFSR+FPVGE  PH HPLWQTAE FGAVCT QID  VTHVVANSLGTDKVNWALS
Sbjct: 1095 AGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALS 1154

Query: 595  TGRFVVHPGWVEASALLYRRASENDFAVK 509
            TGRFVVHPGWVEASALLYRRA+E DFA+K
Sbjct: 1155 TGRFVVHPGWVEASALLYRRANEQDFAIK 1183


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 1195

 Score =  820 bits (2118), Expect = 0.0
 Identities = 489/1013 (48%), Positives = 613/1013 (60%), Gaps = 24/1013 (2%)
 Frame = -1

Query: 3475 KDLGILGEKPGQMFNSLKVVPLEPSSTKLGDQNNAYMGSQYLKQGLTSGIRGRGSFGPLL 3296
            KD  + G+  G   +++  +P +         N A +  +  K G++S  + R +  PLL
Sbjct: 263  KDNDVNGKSSGHDMSAVNKLPTDSFVN-----NKANLSIEGPKTGVSS-FKSRAALLPLL 316

Query: 3295 DLHRDHDVDSLPSPTREAPPPLHFRKQQVDGDRSIKAESKPKVANKKSEDASVHFYETDA 3116
            DLH+DHD DSLPSPTRE+  PL   +              PK+    + ++ +H YETDA
Sbjct: 317  DLHKDHDADSLPSPTRESALPLPAYRVLT-----------PKMV-LDTGNSRMHPYETDA 364

Query: 3115 LKAVSTYQQKFGRNSFLLSNRLPSPTPXXXXXXXXXXXXXXXXXXXXXXNARAVNPLMPP 2936
            LKAVS+YQQKF ++SF L++RLPSPTP                      + R  NPL   
Sbjct: 365  LKAVSSYQQKFSKSSFALTDRLPSPTPSEESGNGDGDTGGEVSSSLSVSSFRPANPLTSG 424

Query: 2935 QAVVSVT-EHMDKSGGQGVMPVKTMGQIASRPNSHGRASSKSRDPRLRLANPEGGTLDPN 2759
            Q+  S++   MD S   GV+ +K+  + +S P+   +AS+KSRDPRLR  N +   LD N
Sbjct: 425  QSNASISLPRMDGSSLPGVISIKSAVRASSAPSLTVKASAKSRDPRLRFVNSDSNALDQN 484

Query: 2758 ARPL-LKDTPKNEHVAGVLNSRKNKNDGDIIGDGRTVKKQRNGVGNWEVSR--------- 2609
             R + + +T K E + G +N ++ K   D I DG ++K+Q+N + N  V R         
Sbjct: 485  HRAVPVVNTLKVEPIGGTMNKKRQKIVDDPIPDGHSLKRQKNALENSGVVRDVKTMVGSG 544

Query: 2608 ---ENCSSVGTPVIDRIQSTENRGDPRKGDPRKSVIGGIFSGQRQGSTTGIFNPVTGGPQ 2438
               E+   VG   +++ Q  +N     + DPR+   GG+ +     S+  I      G +
Sbjct: 545  GWLEDTDMVGPQTMNKNQLVDN----AESDPRRKDGGGVCTSSSCISSVNI-----SGTE 595

Query: 2437 QLPVTGSTPQSLPSIGTFNPITGGLQNLPVIGSTPHSLPSIGTFNPITGGPQQLPVIGST 2258
            Q+PVTG+                   ++P+                   G + +PV GST
Sbjct: 596  QIPVTGT-------------------SVPI-------------------GGELVPVKGST 617

Query: 2257 TQPLPSLLKDIAVDPALLMQLIM--EQQRLQAEAQKSSNLP-QSRMPAFSSSFTPGAAPL 2087
               +P LLK+IAV+P +L+ ++   +QQRL  EAQ+    P +S     +S+   G  P+
Sbjct: 618  A-AIPDLLKNIAVNPTMLINILKMGQQQRLALEAQQKPVDPAKSTTYPLNSNSMLGTVPV 676

Query: 2086 VTTAQSKSSGVEQKPLEKQQTLPSMNLQGELG-VRMKPRDPRRILHSSTFQTNESFGSTQ 1910
            V  A    SG+  +P    Q  P +    +LG +RMKPRDPRR+LH++  Q N S GS  
Sbjct: 677  VGAAH---SGILPRPAGTVQVSPQLGTADDLGKIRMKPRDPRRVLHNNALQRNGSMGSEH 733

Query: 1909 FKTNGSLTSNSQASKDNMSGRQQSQQGDATSLPTHSSPPPDITRQFTKNLRNLADIISSQ 1730
             KTN +    +Q +KDN + ++Q  Q +   +P  S   PDI+  FTKNL+N+ADI+S  
Sbjct: 734  LKTNLTSIPINQETKDNQNLQKQEGQVEKKPVPLQSLALPDISMPFTKNLKNIADIVSVS 793

Query: 1729 PTDT----VPTDPQSAPSSLSMPVKAEQADLPMTASTDQHIGPFLRP--AXXXXXXXXXX 1568
               T    VP +P S P   ++            +S+DQ +G    P  A          
Sbjct: 794  HASTSQPLVPQNPASQPMRTTI------------SSSDQFLGIGSAPGAAAAAAAGPRTQ 841

Query: 1567 XTWGDVEHLFEGYDXXXXXXXXXXXXXXXXXQNTLFAAKKXXXXXXXXXXXLNSAKFVEV 1388
              WGDVEHLFEGY+                 Q  LF+A+K           LNSAKFVEV
Sbjct: 842  NAWGDVEHLFEGYNDQQKAAIQRERARRIEEQKKLFSARKLCLVLDLDHTLLNSAKFVEV 901

Query: 1387 DPVHEEILRKKEEQDREKPHRHLFRFSHMGMWTKLRPGIWTFLEKASKLYELHLYTMGNK 1208
            DPVH+EILRKKEEQDREK HRHLFRF HMGMWTKLRPGIW FLEKASKLYELHLYTMGNK
Sbjct: 902  DPVHDEILRKKEEQDREKAHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 961

Query: 1207 LYATEMAKVLDPSGVLFSGRVISKGDDGDPFDGDEKIPKSKDLEGVLGMEXXXXXXXXXX 1028
            LYATEMAKVLDP+GVLF+GRVIS+GDDG+PFDGDE+IPKSKDLEGVLGME          
Sbjct: 962  LYATEMAKVLDPTGVLFNGRVISRGDDGEPFDGDERIPKSKDLEGVLGMESGVVIMDDSV 1021

Query: 1027 XVWPHNKLNLILVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLTVIERIHQN 848
             VWPHNKLNLI+VERY YFPCSRRQFGLPGPSLLEIDHDERPEDGTLA SL VIERIHQN
Sbjct: 1022 RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQN 1081

Query: 847  FFSNLSLKEVDVRNILASEQRKILAGCRIVFSRIFPVGETKPHQHPLWQTAEQFGAVCTT 668
            FF++ SL E DVRNILASEQRKILAGCRIVFSR+FPVGE  PH HPLWQTAEQFGAVCT 
Sbjct: 1082 FFTHPSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTN 1141

Query: 667  QIDNLVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRASENDFAVK 509
            QID  VTHVVANSLGTDKVNWALSTGRFVV+PGWVEASALLYRRA+E DFA+K
Sbjct: 1142 QIDEQVTHVVANSLGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAIK 1194


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Cucumis sativus]
          Length = 1249

 Score =  801 bits (2069), Expect = 0.0
 Identities = 511/1181 (43%), Positives = 656/1181 (55%), Gaps = 27/1181 (2%)
 Frame = -1

Query: 3970 EFEKRICLILEALDTVTVSDAEKCFGEVCSRLRTALDTLQLIVSESGLSVVGGITDQCFV 3791
            E ++ +  I + LD VT+  A+K F EVCS++ ++++T   ++    +     +  + + 
Sbjct: 193  ELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVELLQGKVVPRKDALIQRLYA 252

Query: 3790 GFEDVNSVFNSMNPKEKGQNKQVFTSLLAHMKNQVPSLFSAEQMEEVQAVL---HSLDPP 3620
                +NSVF SMN  EK ++K+  + LL+++KN  P LFS EQ++ V+  +    SLD  
Sbjct: 253  ALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPEQIKSVEVKMPSTDSLDHL 312

Query: 3619 PSISLGVKDMEVEREVPVNNDVKSELGILGEKPVKSVNELGILGQKPGKDLGILGEKPGQ 3440
            PS+    K++E+     + N VK                          D+         
Sbjct: 313  PSMRGSAKEVEIH----IPNGVK--------------------------DMDFYSAYTST 342

Query: 3439 MFNSLKVVPLEPSSTKLG--DQNNAYMGSQYLKQGLTSGIRGRGSFGPLLDLHRDHDVDS 3266
                     L   S   G   +NN  + S+ L+ G++S I+GRG   PLLDLH+DHD DS
Sbjct: 343  SSQLTPSNKLASDSIPFGVKGKNNLNILSEGLQSGVSS-IKGRGPLLPLLDLHKDHDADS 401

Query: 3265 LPSPTREAPPPLHFRKQ---------QVDGDRSIKAESKPKVANKKSEDASVHFYETDAL 3113
            LPSPTREAP     +K           VDG RS                   H YETDAL
Sbjct: 402  LPSPTREAPTIFSVQKSGNAPTKMAFPVDGSRS-------------------HPYETDAL 442

Query: 3112 KAVSTYQQKFGRNSFLLSNRLPSPTPXXXXXXXXXXXXXXXXXXXXXXNARAVNPLMPPQ 2933
            KAVSTYQQKFGR+SF +++RLPSPTP                        ++ N   P Q
Sbjct: 443  KAVSTYQQKFGRSSFSMADRLPSPTPSEEHDGGGDIGGEVSSSSIIRSL-KSSNVSKPGQ 501

Query: 2932 AVVSVTE-------HMDKSGGQGVMPVKTMGQIASRPNSHGRASSKSRDPRLRLANPEGG 2774
               S +        +MD S  + ++    +   +S  N   +  +KSRDPRLR+ N +  
Sbjct: 502  KSNSASNVSTGLFPNMDSSSTRVLISPLNVAPPSSVSNPTVKPLAKSRDPRLRIVNSDAS 561

Query: 2773 TLDPNARPLLK-DTPKNEHVAGVLNSRKNKNDGDIIGDGRTVKKQRNGVGNWEVSRENCS 2597
             +D N R +    +      A  L+ RK K DG+   DG  VK+ R G  N  V+  +  
Sbjct: 562  GMDLNPRTMASVQSSSILESAATLHLRKQKMDGEPNTDGPEVKRLRIGSQNLAVAASDVR 621

Query: 2596 SVGTPVIDRIQSTENRGDPRKGDPRKSVIGGIFSGQRQGSTTGIFNPVTGGPQQLPVTGS 2417
            +V       ++ T   G PR  +  +  I    + ++   T                +GS
Sbjct: 622  AVSGSG-GWLEDTMPAG-PRLFNRNQMEIAEANATEKSNVTNN--------------SGS 665

Query: 2416 TPQSLPSIGTFNPITGGLQNLPVIGSTPHSLPSIGTFNPITGGPQQLPVIGSTTQPLPSL 2237
              +  P++   N                 SLPS+                          
Sbjct: 666  GNECTPTVNNSNDA---------------SLPSL-------------------------- 684

Query: 2236 LKDIAVDPALLMQLI--MEQQRLQAEAQKSSNLPQSRMPAFSSSFTP--GAAPLVTTAQS 2069
            LKDI V+P +L+ L+   +QQ+L AE +  S+ P+ +     +S  P  G++PL+  A  
Sbjct: 685  LKDIVVNPTMLLNLLKMSQQQQLAAELKLKSSEPE-KNAICPTSLNPCQGSSPLI-NAPV 742

Query: 2068 KSSGVEQKPLEKQQTLPSMNLQGELG-VRMKPRDPRRILHSSTFQTNESFGSTQFKTNGS 1892
             +SG+ Q+        P +  Q +LG VRMKPRDPRR+LH ++ Q   S G+ Q K    
Sbjct: 743  ATSGILQQSAGTPSASPVVGRQDDLGKVRMKPRDPRRVLHGNSLQKVGSLGNDQLKGVVP 802

Query: 1891 LTSNSQASKDNMSGRQQSQQGDATSLPTHSSPPPDITRQFTKNLRNLADIISSQPTDTVP 1712
              SN++ S+D  +G +Q  QGD + L +  +  PDI RQFT NL+N+ADI+S      VP
Sbjct: 803  TASNTEGSRDIPNGHKQEGQGD-SKLASSQTILPDIGRQFTNNLKNIADIMS------VP 855

Query: 1711 TDPQSAPSSLSMPVKAEQADLPMTASTDQHIGPFLRPAXXXXXXXXXXXTWGDVEHLFEG 1532
            + P S+P+S S PV +   D     +  Q        A            WGD+EHLF+ 
Sbjct: 856  SPPTSSPNSSSKPVGSSSMDSKPVTTAFQ--------AVDMAASSRSQGAWGDLEHLFDS 907

Query: 1531 YDXXXXXXXXXXXXXXXXXQNTLFAAKKXXXXXXXXXXXLNSAKFVEVDPVHEEILRKKE 1352
            YD                 Q  +FAA+K           LNSAKFVEVDPVH+EILRKKE
Sbjct: 908  YDDKQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKE 967

Query: 1351 EQDREKPHRHLFRFSHMGMWTKLRPGIWTFLEKASKLYELHLYTMGNKLYATEMAKVLDP 1172
            EQDREK  RHLFRF HMGMWTKLRPG+W FLEKAS+LYELHLYTMGNKLYATEMAKVLDP
Sbjct: 968  EQDREKAQRHLFRFPHMGMWTKLRPGVWNFLEKASELYELHLYTMGNKLYATEMAKVLDP 1027

Query: 1171 SGVLFSGRVISKGDDGDPFDGDEKIPKSKDLEGVLGMEXXXXXXXXXXXVWPHNKLNLIL 992
             GVLF+GRVIS+GDDGDP DGD+++PKSKDLEGVLGME           VWPHNK+NLI+
Sbjct: 1028 KGVLFAGRVISRGDDGDPLDGDDRVPKSKDLEGVLGMESGVVIIDDSIRVWPHNKMNLIV 1087

Query: 991  VERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLTVIERIHQNFFSNLSLKEVDV 812
            VERYTYFPCSRRQFGL GPSLLEIDHDERPEDGTLASSL VI+RIHQ+FFSN  L +VDV
Sbjct: 1088 VERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLGVIQRIHQSFFSNPELDQVDV 1147

Query: 811  RNILASEQRKILAGCRIVFSRIFPVGETKPHQHPLWQTAEQFGAVCTTQIDNLVTHVVAN 632
            R IL++EQ+KILAGCRIVFSR+FPVGE  PH HPLWQTAEQFGA CT QID  VTHVVAN
Sbjct: 1148 RTILSAEQQKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAQCTNQIDEQVTHVVAN 1207

Query: 631  SLGTDKVNWALSTGRFVVHPGWVEASALLYRRASENDFAVK 509
            SLGTDKVNWALSTGRFVVHPGWVEASALLYRRA+E DFA+K
Sbjct: 1208 SLGTDKVNWALSTGRFVVHPGWVEASALLYRRATEQDFAIK 1248


>ref|XP_003530482.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1244

 Score =  801 bits (2069), Expect = 0.0
 Identities = 510/1153 (44%), Positives = 659/1153 (57%), Gaps = 11/1153 (0%)
 Frame = -1

Query: 3934 LDTVTVSDAEKCFGEVCSRLRTALDTLQLIVSESGLSVVGGITDQCFVGFEDVNSVFNSM 3755
            L+ VTV++  + F + CS+L+   +TL  ++S    S    +    F   E V SVF SM
Sbjct: 176  LEGVTVANVVESFAQTCSKLQ---NTLPEVLSRPAGSEKDDLVRLSFNATEVVYSVFCSM 232

Query: 3754 NPKEKGQNKQVFTSLLAHMKNQVPS-LFSAEQMEEVQAVLHSLDPPPSISLGVKDMEVER 3578
            +  EK QNK     LL+ +K+Q  + LFS E ++E+Q ++ ++D   S+   V    + +
Sbjct: 233  DSSEKEQNKDSILRLLSFVKDQQQAQLFSPEHVKEIQGMMTAID---SVGALVNSEAIGK 289

Query: 3577 EVPVNN-DVKSELGILGEKPVKSVNELGILGQKPGKDLGILGEKPGQMFNSLKVVPLEPS 3401
            E  +   ++K++          S  E+ I   K  ++  +   +  ++ +  K +  + +
Sbjct: 290  EKELQTTEIKTQ--------ENSAVEVQIHEIKTQENQAV---EAAELISYSKPLHRDIT 338

Query: 3400 STKLGDQNNAYMGSQYLKQGLTSGIRGRGSFGPLLDLHRDHDVDSLPSPTREAPPPLHFR 3221
             T           SQ LK G  S I+GRG   PLLDLH+DHD DSLPSPTREAP      
Sbjct: 339  GT-----------SQALKFGQNS-IKGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVN 386

Query: 3220 KQQVDGDRSIKAESKPKVANKKSEDASVHFYETDALKAVSTYQQKFGRNSFLLSNRLPSP 3041
            K    G+  +++ S        SE +  H YETDALKAVSTYQQKFGR+S   +++ PSP
Sbjct: 387  KLLSVGESMVRSGSASAKMELDSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKFPSP 446

Query: 3040 TPXXXXXXXXXXXXXXXXXXXXXXNARAVNPLMPPQAVVSVTEHMDKSGGQGVMPVKTMG 2861
            TP                         +  P +  Q  VS T  MD+S   G +  +   
Sbjct: 447  TPSGDCEDEVVDTNEEVSSASTGDFLTSTKPTLLDQPPVSATS-MDRSSMHGFISSRVD- 504

Query: 2860 QIASRPNSHG-RASSKSRDPRLRLANPEGGTLDPNARPLLKDTPKNEHVAGVLNSRKNKN 2684
              A+ P S   ++S+K+RDPRLR  N +   +D N   L+ +  K E+ +G   SRK K 
Sbjct: 505  --ATGPGSFPVKSSAKNRDPRLRFINSDASAVD-NLSTLINNMSKVEY-SGTTISRKQKA 560

Query: 2683 DGDIIGDGRTVKKQRNGVGNWEVSRENCSSVGTPVIDRIQSTENRGDPRKGDPRKSVIGG 2504
              +   D    K+ ++ + N E    N S V T     ++  EN G   +   R  ++  
Sbjct: 561  AEEPSLDVTVSKRLKSSLENTE---HNMSEVRTGSGGWLE--ENTGPGAQLIERNHLMDK 615

Query: 2503 IFSGQRQGSTTGIFNPVTGGPQQLPVTGSTPQSLPSIGTFNPITGGLQNLPVIGSTPHSL 2324
                                          P++  ++ T +    G  N           
Sbjct: 616  F----------------------------GPEAKKTLNTVSSSCTGSDN----------- 636

Query: 2323 PSIGTFNPITGGPQQLPVIGSTT-QPLPSLLKDIAVDPALLMQLIM--EQQRLQAEAQKS 2153
                 FN  +   +Q P+  S     LP+LLK+ +V+P +L+ ++   E Q+  A++   
Sbjct: 637  -----FNATSIRNEQAPITASNVLASLPALLKEASVNPIMLVNILRLAEAQKKSADSAAI 691

Query: 2152 SNL-PQSRMPAFSSSFTPGAAPLVTTAQSKSSGVEQKPLEKQQTLPSMNLQGELG-VRMK 1979
              L P S  PA  +  T      + T   +SS V   P+  Q T  +  LQ + G +RMK
Sbjct: 692  MLLHPTSSNPAMGTDSTASIGSSMATGLLQSS-VGMLPVSSQSTSTAQTLQDDSGKIRMK 750

Query: 1978 PRDPRRILHSS-TFQTNESFGSTQFKTNGSLTSNSQASKDNMSGRQQSQQGDATSLPTHS 1802
            PRDPRRILH++ T Q +   G+ QFK   S  SN+Q + DN++  +   + D   +PT S
Sbjct: 751  PRDPRRILHTNNTIQKSGDLGNEQFKAIVSPVSNNQRTGDNVNAPKLEGRVDNKLVPTQS 810

Query: 1801 SPPPDITRQFTKNLRNLADIISSQPTDTVPTDPQSAPSSLSMPVKAEQADLPMTASTDQH 1622
            S  PDI RQFT+NL+N+ADI+S     +  T      SS S+P+ +++ +     S+ Q+
Sbjct: 811  SAQPDIARQFTRNLKNIADIMSVSQESSTHTPVSQNFSSASVPLTSDRGEQKSVVSSSQN 870

Query: 1621 IGPFLRPAXXXXXXXXXXXT--WGDVEHLFEGYDXXXXXXXXXXXXXXXXXQNTLFAAKK 1448
            +   +  A              WGDVEHLFEGYD                 QN +FAA+K
Sbjct: 871  LQADMASAHETAASVTSRSQSTWGDVEHLFEGYDEQQKAAIQRERARRIEEQNKMFAARK 930

Query: 1447 XXXXXXXXXXXLNSAKFVEVDPVHEEILRKKEEQDREKPHRHLFRFSHMGMWTKLRPGIW 1268
                       LNSAKFVEVDP+H+EILRKKEEQDREKPHRHLFRF HMGMWTKLRPGIW
Sbjct: 931  LCLVLDLDHTLLNSAKFVEVDPLHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIW 990

Query: 1267 TFLEKASKLYELHLYTMGNKLYATEMAKVLDPSGVLFSGRVISKGDDGDPFDGDEKIPKS 1088
             FLEKASKLYELHLYTMGNKLYATEMAKVLDP GVLF+GRVIS+GDD D  DG+E++PKS
Sbjct: 991  NFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDTDSVDGEERVPKS 1050

Query: 1087 KDLEGVLGMEXXXXXXXXXXXVWPHNKLNLILVERYTYFPCSRRQFGLPGPSLLEIDHDE 908
            KDLEGVLGME           VWPHNKLNLI+VERYTYFPCSRRQFGLPGPSLLEIDHDE
Sbjct: 1051 KDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDE 1110

Query: 907  RPEDGTLASSLTVIERIHQNFFSNLSLKEVDVRNILASEQRKILAGCRIVFSRIFPVGET 728
            RPE GTLASSL VIE+IHQ FF++ SL+EVDVRNILASEQRKILAGCRIVFSR+FPVGE 
Sbjct: 1111 RPEAGTLASSLAVIEKIHQIFFASQSLEEVDVRNILASEQRKILAGCRIVFSRVFPVGEA 1170

Query: 727  KPHQHPLWQTAEQFGAVCTTQIDNLVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 548
             PH HPLWQTAEQFGAVCT QID  VTHVVANS GTDKVNWAL+ GRFVVHPGWVEASAL
Sbjct: 1171 NPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSPGTDKVNWALNNGRFVVHPGWVEASAL 1230

Query: 547  LYRRASENDFAVK 509
            LYRRA+E DFA+K
Sbjct: 1231 LYRRANEQDFAIK 1243