BLASTX nr result

ID: Coptis25_contig00004061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004061
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571259.1| PREDICTED: putative copper-transporting ATPa...    96   3e-19
ref|XP_002513473.1| copper-transporting atpase p-type, putative ...    95   3e-19
gb|AFW70752.1| hypothetical protein ZEAMMB73_147775 [Zea mays]         94   6e-19
gb|ADB28922.1| unknown [Zea mays subsp. mays]                          94   6e-19
ref|NP_001046193.1| Os02g0196600 [Oryza sativa Japonica Group] g...    94   7e-19

>ref|XP_003571259.1| PREDICTED: putative copper-transporting ATPase 3-like [Brachypodium
            distachyon]
          Length = 981

 Score = 95.5 bits (236), Expect(2) = 3e-19
 Identities = 51/75 (68%), Positives = 56/75 (74%)
 Frame = +1

Query: 922  GLAHFWEGGVYSKAIDGFELPLQFGISVLVVAYPCALGSATPTAVMIST*IGASQGVLIK 1101
            G  H +      KA+D FEL LQFGISVLVVA PCALG ATPTAVM++T  GASQGVLIK
Sbjct: 565  GQLHLYPQEWIPKAMDSFELALQFGISVLVVACPCALGLATPTAVMVATGKGASQGVLIK 624

Query: 1102 GRNALEKAHKARNCI 1146
            G NALEKAHK +  I
Sbjct: 625  GGNALEKAHKVKTII 639



 Score = 27.3 bits (59), Expect(2) = 3e-19
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 893 VVVAALMTWLDWLIFGK 943
           VVVAA +TWL W I G+
Sbjct: 550 VVVAAFLTWLGWFIPGQ 566


>ref|XP_002513473.1| copper-transporting atpase p-type, putative [Ricinus communis]
            gi|223547381|gb|EEF48876.1| copper-transporting atpase
            p-type, putative [Ricinus communis]
          Length = 968

 Score = 94.7 bits (234), Expect(2) = 3e-19
 Identities = 51/74 (68%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
 Frame = +1

Query: 940  EGGVYS-----KAIDGFELPLQFGISVLVVAYPCALGSATPTAVMIST*IGASQGVLIKG 1104
            E G+Y      KA+D FEL LQFGISVLVVA PCALG ATPTAVM++T  GASQGVLIKG
Sbjct: 567  EAGLYPRHWIPKAMDSFELALQFGISVLVVACPCALGLATPTAVMVATGKGASQGVLIKG 626

Query: 1105 RNALEKAHKARNCI 1146
             NALEKAHK +  +
Sbjct: 627  GNALEKAHKVKTVV 640



 Score = 28.1 bits (61), Expect(2) = 3e-19
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 893 VVVAALMTWLDWLIFGKA 946
           VV+AA +TWL W I G+A
Sbjct: 551 VVIAAFITWLGWFIPGEA 568


>gb|AFW70752.1| hypothetical protein ZEAMMB73_147775 [Zea mays]
          Length = 974

 Score = 94.4 bits (233), Expect(2) = 6e-19
 Identities = 51/75 (68%), Positives = 56/75 (74%)
 Frame = +1

Query: 922  GLAHFWEGGVYSKAIDGFELPLQFGISVLVVAYPCALGSATPTAVMIST*IGASQGVLIK 1101
            G  H +      KA+D FEL LQFGISVLVVA PCALG ATPTAVM++T  GASQGVLIK
Sbjct: 562  GQLHLYPQQWIPKAMDSFELALQFGISVLVVACPCALGLATPTAVMVATGKGASQGVLIK 621

Query: 1102 GRNALEKAHKARNCI 1146
            G NALEKAHK +  I
Sbjct: 622  GGNALEKAHKIKAII 636



 Score = 27.3 bits (59), Expect(2) = 6e-19
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 893 VVVAALMTWLDWLIFGK 943
           VVVAA +TWL W I G+
Sbjct: 547 VVVAAFLTWLGWFIPGQ 563


>gb|ADB28922.1| unknown [Zea mays subsp. mays]
          Length = 441

 Score = 94.4 bits (233), Expect(2) = 6e-19
 Identities = 51/75 (68%), Positives = 56/75 (74%)
 Frame = +1

Query: 922  GLAHFWEGGVYSKAIDGFELPLQFGISVLVVAYPCALGSATPTAVMIST*IGASQGVLIK 1101
            G  H +      KA+D FEL LQFGISVLVVA PCALG ATPTAVM++T  GASQGVLIK
Sbjct: 146  GQLHLYPQQWIPKAMDSFELALQFGISVLVVACPCALGLATPTAVMVATGKGASQGVLIK 205

Query: 1102 GRNALEKAHKARNCI 1146
            G NALEKAHK +  I
Sbjct: 206  GGNALEKAHKIKAII 220



 Score = 27.3 bits (59), Expect(2) = 6e-19
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 893 VVVAALMTWLDWLIFGK 943
           VVVAA +TWL W I G+
Sbjct: 131 VVVAAFLTWLGWFIPGQ 147


>ref|NP_001046193.1| Os02g0196600 [Oryza sativa Japonica Group]
            gi|49388132|dbj|BAD25263.1| putative copper-transporting
            P-type ATPase [Oryza sativa Japonica Group]
            gi|49388148|dbj|BAD25276.1| putative copper-transporting
            P-type ATPase [Oryza sativa Japonica Group]
            gi|113535724|dbj|BAF08107.1| Os02g0196600 [Oryza sativa
            Japonica Group] gi|125581160|gb|EAZ22091.1| hypothetical
            protein OsJ_05752 [Oryza sativa Japonica Group]
          Length = 978

 Score = 93.6 bits (231), Expect(2) = 7e-19
 Identities = 49/63 (77%), Positives = 53/63 (84%)
 Frame = +1

Query: 958  KAIDGFELPLQFGISVLVVAYPCALGSATPTAVMIST*IGASQGVLIKGRNALEKAHKAR 1137
            KA+D FEL LQFGISVLVVA PCALG ATPTAVM++T  GASQGVLIKG NALEKAHK +
Sbjct: 577  KAMDSFELALQFGISVLVVACPCALGLATPTAVMVATGKGASQGVLIKGGNALEKAHKVK 636

Query: 1138 NCI 1146
              I
Sbjct: 637  AII 639



 Score = 27.7 bits (60), Expect(2) = 7e-19
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 893 VVVAALMTWLDWLIFGK 943
           VVVAA +TWL W + G+
Sbjct: 550 VVVAAFLTWLGWFVAGQ 566


Top