BLASTX nr result

ID: Coptis25_contig00004014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004014
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30773.3| unnamed protein product [Vitis vinifera]              381   e-103
ref|XP_002267059.1| PREDICTED: uncharacterized protein LOC100267...   381   e-103
ref|XP_002531244.1| conserved hypothetical protein [Ricinus comm...   369   e-100
ref|XP_004146014.1| PREDICTED: uncharacterized protein LOC101204...   362   1e-97
gb|AEV43359.1| structural maintenance of chromosomes domain-cont...   350   3e-94

>emb|CBI30773.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  381 bits (979), Expect = e-103
 Identities = 199/307 (64%), Positives = 235/307 (76%), Gaps = 10/307 (3%)
 Frame = -3

Query: 1143 GQLKGPPM------HEPQF-GR---PMPHPALLEEMREAQFGRXXXXXXXXXXXXXXXXX 994
            G+ +GPPM      HEP F GR   PMPHPALL+E    QFGR                 
Sbjct: 79   GRNRGPPMPIKGGLHEPPFRGRGLGPMPHPALLDE---PQFGRGAGGPRPGTLIPHPAAI 135

Query: 993  FIEERLAGQHQEIQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMRAEKDVQLR 814
              E+RLA QHQ+IQ LL+DNQRLAATHVAL+QEVEAA  E+KRM+H+A S + E D+QLR
Sbjct: 136  -FEDRLALQHQDIQALLIDNQRLAATHVALKQEVEAAQHEIKRMAHVAASAQTEMDLQLR 194

Query: 813  EVYEKSMKMEADLHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELTRANADLQQ 634
            E +EK MK+EADL   +AM+AE+ +VR D+Q+L+A RQELT Q +GL+Q+L RAN DLQQ
Sbjct: 195  EAFEKVMKLEADLRASDAMRAEVMQVRADIQQLTAARQELTSQAEGLSQDLNRANLDLQQ 254

Query: 633  VPALKADVETMKQELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEKLRAEVANA 454
            VP LK ++E M+QEL+RARAAIEYE+KG+AENYE GQAMEKNLI MARE+EKLRAE+ANA
Sbjct: 255  VPLLKGEIEGMRQELQRARAAIEYEKKGYAENYEHGQAMEKNLIAMAREMEKLRAELANA 314

Query: 453  EKRVRATAAVGNQGYGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQYGPGPGAWSAY 274
            EKR RA AAVGNQ YGG+Y NP+TGY GNPY +GYGMNP QG AEG PQYGPGPG+W  Y
Sbjct: 315  EKRARAAAAVGNQIYGGSYGNPETGYGGNPYPAGYGMNPGQGSAEGVPQYGPGPGSWGTY 374

Query: 273  DMQRAPG 253
            DMQRA G
Sbjct: 375  DMQRAHG 381


>ref|XP_002267059.1| PREDICTED: uncharacterized protein LOC100267569 [Vitis vinifera]
            gi|147835469|emb|CAN63248.1| hypothetical protein
            VITISV_022231 [Vitis vinifera]
          Length = 307

 Score =  381 bits (979), Expect = e-103
 Identities = 199/307 (64%), Positives = 235/307 (76%), Gaps = 10/307 (3%)
 Frame = -3

Query: 1143 GQLKGPPM------HEPQF-GR---PMPHPALLEEMREAQFGRXXXXXXXXXXXXXXXXX 994
            G+ +GPPM      HEP F GR   PMPHPALL+E    QFGR                 
Sbjct: 3    GRNRGPPMPIKGGLHEPPFRGRGLGPMPHPALLDE---PQFGRGAGGPRPGTLIPHPAAI 59

Query: 993  FIEERLAGQHQEIQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMRAEKDVQLR 814
              E+RLA QHQ+IQ LL+DNQRLAATHVAL+QEVEAA  E+KRM+H+A S + E D+QLR
Sbjct: 60   -FEDRLALQHQDIQALLIDNQRLAATHVALKQEVEAAQHEIKRMAHVAASAQTEMDLQLR 118

Query: 813  EVYEKSMKMEADLHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELTRANADLQQ 634
            E +EK MK+EADL   +AM+AE+ +VR D+Q+L+A RQELT Q +GL+Q+L RAN DLQQ
Sbjct: 119  EAFEKVMKLEADLRASDAMRAEVMQVRADIQQLTAARQELTSQAEGLSQDLNRANLDLQQ 178

Query: 633  VPALKADVETMKQELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEKLRAEVANA 454
            VP LK ++E M+QEL+RARAAIEYE+KG+AENYE GQAMEKNLI MARE+EKLRAE+ANA
Sbjct: 179  VPLLKGEIEGMRQELQRARAAIEYEKKGYAENYEHGQAMEKNLIAMAREMEKLRAELANA 238

Query: 453  EKRVRATAAVGNQGYGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQYGPGPGAWSAY 274
            EKR RA AAVGNQ YGG+Y NP+TGY GNPY +GYGMNP QG AEG PQYGPGPG+W  Y
Sbjct: 239  EKRARAAAAVGNQIYGGSYGNPETGYGGNPYPAGYGMNPGQGSAEGVPQYGPGPGSWGTY 298

Query: 273  DMQRAPG 253
            DMQRA G
Sbjct: 299  DMQRAHG 305


>ref|XP_002531244.1| conserved hypothetical protein [Ricinus communis]
            gi|223529163|gb|EEF31141.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 315

 Score =  369 bits (948), Expect = e-100
 Identities = 198/317 (62%), Positives = 234/317 (73%), Gaps = 17/317 (5%)
 Frame = -3

Query: 1152 RNRGQ---LKG--------PPMHEPQFGR---PMP-HPALLEEMREAQFGRXXXXXXXXX 1018
            RNRG    +KG        P +HEP FGR   PMP HPALLEE+RE+QFG          
Sbjct: 4    RNRGPPLPMKGVTPHGGMPPVIHEPHFGRGLGPMPPHPALLEELRESQFG-------LDP 56

Query: 1017 XXXXXXXXFIEERLAGQHQEIQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMR 838
                     +EERLA QHQ+IQGLL DNQR +ATHVAL+QE+EAAH EL+RM+H   S+ 
Sbjct: 57   RRLPPHPAVMEERLAVQHQDIQGLLADNQRFSATHVALKQELEAAHHELERMAHYGNSLH 116

Query: 837  AEKDVQLREVYEKSMKMEADLHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELT 658
             EKDVQ+RE++EKSM++EADL  VEAM+AEL  VR D+++LS  RQELT +VQ +TQ+L 
Sbjct: 117  VEKDVQMRELHEKSMRLEADLREVEAMRAELHHVRADIKELSEVRQELTGRVQMMTQDLA 176

Query: 657  RANADLQQVPALKADVETMKQELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEK 478
            R NADLQQVPA+KAD+E+MKQ+L+ ARAAI+YE+KG+AENYE GQ MEK LI MARE+EK
Sbjct: 177  RYNADLQQVPAVKADIESMKQQLQHARAAIDYEKKGYAENYEHGQVMEKKLIAMARELEK 236

Query: 477  LRAEVANAEKRVRATAAVGNQG--YGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQY 304
            LRAE+ANAEKR RA  AVGN G  Y   Y N + GYAGNPY  GYGMNPVQ  AE  PQY
Sbjct: 237  LRAEIANAEKRARAAVAVGNPGATYNANYGNSEAGYAGNPYPIGYGMNPVQANAESYPQY 296

Query: 303  GPGPGAWSAYDMQRAPG 253
            G GPG+W AYDMQRA G
Sbjct: 297  GVGPGSWGAYDMQRAQG 313


>ref|XP_004146014.1| PREDICTED: uncharacterized protein LOC101204235 [Cucumis sativus]
            gi|449503648|ref|XP_004162107.1| PREDICTED:
            uncharacterized LOC101204235 [Cucumis sativus]
          Length = 313

 Score =  362 bits (929), Expect = 1e-97
 Identities = 183/298 (61%), Positives = 224/298 (75%), Gaps = 6/298 (2%)
 Frame = -3

Query: 1128 PPMHEPQFGR---PMPHPALLEEMREAQFGRXXXXXXXXXXXXXXXXXFIEERLAGQHQE 958
            PP+ EP F R   P+PHP LLEE+RE+Q+G                   IEERLA QHQ+
Sbjct: 21   PPVREPPFARGLGPLPHPVLLEEIRESQYGMHPVSLPPHPAI-------IEERLAAQHQD 73

Query: 957  IQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMRAEKDVQLREVYEKSMKMEAD 778
            IQGLL+DNQRLAATHVAL+QE+EAA  EL+RM+H+A S+ AE+D+Q+RE+YEKS+++E D
Sbjct: 74   IQGLLLDNQRLAATHVALKQELEAAQHELQRMAHVADSLHAERDIQMRELYEKSVRLEVD 133

Query: 777  LHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELTRANADLQQVPALKADVETMK 598
            + GVE M+AEL +V +DV++L+A RQEL  QVQ +TQ+LTR  ADLQQVPAL+ ++ET+K
Sbjct: 134  MRGVETMRAELLQVHSDVKELTAARQELNGQVQAMTQDLTRITADLQQVPALRGEIETVK 193

Query: 597  QELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEKLRAEVANAEKRVRATAAVGN 418
            QEL RAR AIEYE+KG+AENYE GQ MEK L+ MARE+EKLRAEVANAEKR  A+AAVG 
Sbjct: 194  QELHRARVAIEYEKKGYAENYEHGQVMEKKLVSMARELEKLRAEVANAEKRAHASAAVGG 253

Query: 417  Q---GYGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQYGPGPGAWSAYDMQRAPG 253
                GYG  Y N   GY GNPYS+ YG+N VQ G EG P YGPG   W AYD+QRA G
Sbjct: 254  NAAAGYGANYGNADAGYGGNPYSTNYGLNSVQSGTEGYPPYGPGSVPWGAYDIQRAQG 311


>gb|AEV43359.1| structural maintenance of chromosomes domain-containing protein
            [Citrus sinensis]
          Length = 302

 Score =  350 bits (899), Expect = 3e-94
 Identities = 191/314 (60%), Positives = 227/314 (72%), Gaps = 14/314 (4%)
 Frame = -3

Query: 1152 RNRGQ---LKGPP-------MHEPQFGR---PMP-HPALLEEMREAQFGRXXXXXXXXXX 1015
            RNRG    +KG P       +HEPQFGR   PMP HPALLEEMRE QFG           
Sbjct: 4    RNRGPPLPMKGAPPVGLPLPVHEPQFGRGLGPMPPHPALLEEMRETQFGMGPRPLPPTHP 63

Query: 1014 XXXXXXXFIEERLAGQHQEIQGLLVDNQRLAATHVALQQEVEAAHLELKRMSHIAGSMRA 835
                    IEERLA QHQ+IQGLL DNQRLAATHVAL+QE+E A  EL+RM H A S R 
Sbjct: 64   AI------IEERLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRM 117

Query: 834  EKDVQLREVYEKSMKMEADLHGVEAMKAELGKVRNDVQKLSAGRQELTVQVQGLTQELTR 655
            +KDVQ+RE+Y+KS+++E DL GVEAM++EL KV+ D+++L+A RQELT Q Q ++Q+L R
Sbjct: 118  DKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELTGQAQMMSQDLVR 177

Query: 654  ANADLQQVPALKADVETMKQELERARAAIEYERKGHAENYEQGQAMEKNLILMAREVEKL 475
              ADLQQVPALKA++E +KQEL+RARAAIE+++KG+AENYE GQ MEK LI MARE+EKL
Sbjct: 178  LTADLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKL 237

Query: 474  RAEVANAEKRVRATAAVGNQGYGGTYNNPQTGYAGNPYSSGYGMNPVQGGAEGAPQYGPG 295
            RAE+AN+EKR RA AAVGN           +GY  NPY   Y MNPVQ GAE  P YGPG
Sbjct: 238  RAEIANSEKRARAAAAVGN-----------SGYPSNPYPVSYSMNPVQAGAETYPHYGPG 286

Query: 294  PGAWSAYDMQRAPG 253
            PG+W AYDMQRA G
Sbjct: 287  PGSWGAYDMQRAQG 300


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