BLASTX nr result
ID: Coptis25_contig00004003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004003
(2074 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig... 838 0.0
emb|CBI38350.3| unnamed protein product [Vitis vinifera] 838 0.0
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera] 828 0.0
ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2... 825 0.0
ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|2... 825 0.0
>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
vinifera]
Length = 652
Score = 838 bits (2166), Expect = 0.0
Identities = 385/557 (69%), Positives = 452/557 (81%), Gaps = 1/557 (0%)
Frame = -1
Query: 2038 YIENNDVDFDDTIS-RKQKNYTVLSEEDIRHLQEEDITRICAVLSISRVSAAILLCNYNW 1862
+I+N+ D DD S R Q+NYT+L+E DIR QE+DITRI VLSI RVSA+ILL +Y W
Sbjct: 103 FIDNDSDDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYW 162
Query: 1861 SVSNVHDAWFADEENVRKTVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFC 1682
SVS VHD WFADEE VRK VGL+EKPVVQ+P ++++TCGICF+NY +SSAACGH FC
Sbjct: 163 SVSKVHDEWFADEEKVRKAVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFC 222
Query: 1681 TTCWKGYISTSINDGPGCLILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEA 1502
TCW GY ST+I DGPGCL+LRCPDP+CG AVGQ+MI++L SDE K+KYSRY LRSY+E
Sbjct: 223 GTCWAGYTSTAITDGPGCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIED 282
Query: 1501 NRKTKWCPAPGCEYAVDFIVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNS 1322
NRKTKWCPAPGC+YAVDFIVGSG+YDV C C+Y+FCWNC EE HRPVDC TV+KWILKNS
Sbjct: 283 NRKTKWCPAPGCDYAVDFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNS 342
Query: 1321 AESENVNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGY 1142
AESEN+NWILANSKPCPKCKRPIEKN GCMH+TCTPPCKF+FCWLCLG+W+DHG RTGG+
Sbjct: 343 AESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGF 402
Query: 1141 YSCNRYAAAKKDGEYEESEKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVH 962
Y+CNRY AK++G Y+E+EKRR+MAK SLERYTHYYERWATN SSR KA+ +LQ+MQTV+
Sbjct: 403 YACNRYETAKQEGVYDEAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVN 462
Query: 961 IEKLIDEQCQLKSQLKFITDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQA 782
IEKL D+QCQ +SQLKFIT+AWLQI+ECRRVLKWTYAYGYYLPE E KR FFEYLQG+A
Sbjct: 463 IEKLSDKQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEA 522
Query: 781 ESGLERLHKCAEKDLAVYLDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADV 602
ESGLERLH+CAEK+L YLD +GPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DV
Sbjct: 523 ESGLERLHQCAEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDV 582
Query: 601 DSHSACXXXXXXXXXXXXXXXXXXXXXXXXXXSNGDGQSQENHNQDNHSQENQGSWTCEH 422
DS AC G G S + + + + ++ G W+CEH
Sbjct: 583 DSRGAC--------SRTASSKSLGGGSSKARGGRGKGTSSRS-SSSSRNLDDSGHWSCEH 633
Query: 421 CTYLNDQPATICLMCNR 371
CT+ N + ATIC +C +
Sbjct: 634 CTFANVRSATICQICQQ 650
>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 838 bits (2166), Expect = 0.0
Identities = 385/557 (69%), Positives = 452/557 (81%), Gaps = 1/557 (0%)
Frame = -1
Query: 2038 YIENNDVDFDDTIS-RKQKNYTVLSEEDIRHLQEEDITRICAVLSISRVSAAILLCNYNW 1862
+I+N+ D DD S R Q+NYT+L+E DIR QE+DITRI VLSI RVSA+ILL +Y W
Sbjct: 32 FIDNDSDDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYW 91
Query: 1861 SVSNVHDAWFADEENVRKTVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFC 1682
SVS VHD WFADEE VRK VGL+EKPVVQ+P ++++TCGICF+NY +SSAACGH FC
Sbjct: 92 SVSKVHDEWFADEEKVRKAVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFC 151
Query: 1681 TTCWKGYISTSINDGPGCLILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEA 1502
TCW GY ST+I DGPGCL+LRCPDP+CG AVGQ+MI++L SDE K+KYSRY LRSY+E
Sbjct: 152 GTCWAGYTSTAITDGPGCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIED 211
Query: 1501 NRKTKWCPAPGCEYAVDFIVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNS 1322
NRKTKWCPAPGC+YAVDFIVGSG+YDV C C+Y+FCWNC EE HRPVDC TV+KWILKNS
Sbjct: 212 NRKTKWCPAPGCDYAVDFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNS 271
Query: 1321 AESENVNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGY 1142
AESEN+NWILANSKPCPKCKRPIEKN GCMH+TCTPPCKF+FCWLCLG+W+DHG RTGG+
Sbjct: 272 AESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGF 331
Query: 1141 YSCNRYAAAKKDGEYEESEKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVH 962
Y+CNRY AK++G Y+E+EKRR+MAK SLERYTHYYERWATN SSR KA+ +LQ+MQTV+
Sbjct: 332 YACNRYETAKQEGVYDEAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVN 391
Query: 961 IEKLIDEQCQLKSQLKFITDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQA 782
IEKL D+QCQ +SQLKFIT+AWLQI+ECRRVLKWTYAYGYYLPE E KR FFEYLQG+A
Sbjct: 392 IEKLSDKQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEA 451
Query: 781 ESGLERLHKCAEKDLAVYLDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADV 602
ESGLERLH+CAEK+L YLD +GPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DV
Sbjct: 452 ESGLERLHQCAEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDV 511
Query: 601 DSHSACXXXXXXXXXXXXXXXXXXXXXXXXXXSNGDGQSQENHNQDNHSQENQGSWTCEH 422
DS AC G G S + + + + ++ G W+CEH
Sbjct: 512 DSRGAC--------SRTASSKSLGGGSSKARGGRGKGTSSRS-SSSSRNLDDSGHWSCEH 562
Query: 421 CTYLNDQPATICLMCNR 371
CT+ N + ATIC +C +
Sbjct: 563 CTFANVRSATICQICQQ 579
>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
Length = 588
Score = 828 bits (2139), Expect = 0.0
Identities = 377/539 (69%), Positives = 441/539 (81%)
Frame = -1
Query: 1987 KNYTVLSEEDIRHLQEEDITRICAVLSISRVSAAILLCNYNWSVSNVHDAWFADEENVRK 1808
+NYT+L+E DIR QE+DITRI VLSI RVSA+ILL +Y WSVS VHD WFADEE VRK
Sbjct: 57 QNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRK 116
Query: 1807 TVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFCTTCWKGYISTSINDGPGC 1628
VGL+EKPVVQ+P ++++TCGICF+NY +SSAACGH FC TCW GY ST+I DGPGC
Sbjct: 117 AVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGC 176
Query: 1627 LILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEANRKTKWCPAPGCEYAVDF 1448
L+LRCPDP+CG AVGQ+MI++L SDE K+KYSRY LRSY+E NRKTKWCPAPGC+YAVDF
Sbjct: 177 LMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDF 236
Query: 1447 IVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNSAESENVNWILANSKPCPK 1268
IVGSG+YDV C C+Y+FCWNC EE HRPVDC TV+KWILKNSAESEN+NWILANSKPCPK
Sbjct: 237 IVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPK 296
Query: 1267 CKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGYYSCNRYAAAKKDGEYEES 1088
CKRPIEKN GCMH+TCTPPCKF+FCWLCLG+W+DHG RTGG+Y+CNRY AK++G Y+E+
Sbjct: 297 CKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEA 356
Query: 1087 EKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVHIEKLIDEQCQLKSQLKFI 908
EKRR+MAK SLERYTHYYERWATN SSR KA+ +LQ+MQTV+IEKL D+QCQ +SQLKFI
Sbjct: 357 EKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFI 416
Query: 907 TDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQAESGLERLHKCAEKDLAVY 728
T+AWLQI+ECRRVLKWTYAYGYYLPE E KR FFEYLQG+AESGLERLH+CAEK+L Y
Sbjct: 417 TEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTY 476
Query: 727 LDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADVDSHSACXXXXXXXXXXXX 548
LD +GPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DVDS AC
Sbjct: 477 LDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGAC--------SRTA 528
Query: 547 XXXXXXXXXXXXXXSNGDGQSQENHNQDNHSQENQGSWTCEHCTYLNDQPATICLMCNR 371
G G S + + + + ++ G W+CEHCT+ N + ATIC +C +
Sbjct: 529 SSKSLGGGSSKARGGRGKGTSSRS-SSSSRNLDDSGHWSCEHCTFANVRSATICQICQQ 586
>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
predicted protein [Populus trichocarpa]
Length = 591
Score = 825 bits (2132), Expect = 0.0
Identities = 378/557 (67%), Positives = 446/557 (80%), Gaps = 1/557 (0%)
Frame = -1
Query: 2038 YIENNDVDFDDTIS-RKQKNYTVLSEEDIRHLQEEDITRICAVLSISRVSAAILLCNYNW 1862
+I+N+ D DD IS R Q+NYTVLSEEDIR Q++D+ RI VLSIS+V+A+ILL YNW
Sbjct: 42 FIDNDSDDSDDLISHRHQQNYTVLSEEDIRQRQDDDVMRIATVLSISKVAASILLRYYNW 101
Query: 1861 SVSNVHDAWFADEENVRKTVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFC 1682
SVS VHD WFADEE VRK VGL+E+PVV +P +++TCGICF+ Y + +AACGH FC
Sbjct: 102 SVSKVHDEWFADEEKVRKAVGLLEEPVVPFPDGREMTCGICFETYPSDRLLAAACGHPFC 161
Query: 1681 TTCWKGYISTSINDGPGCLILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEA 1502
+CW GYIST+INDGPGCL+LRCPDPSC A+GQ+MI++L SDE +K+SRY +RSY+E
Sbjct: 162 NSCWAGYISTAINDGPGCLMLRCPDPSCNAAIGQDMINLLTSDEDSEKHSRYFIRSYIED 221
Query: 1501 NRKTKWCPAPGCEYAVDFIVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNS 1322
NRKTKWCPAPGC+YAVDFIVGSG+YDV C C Y+FCWNC EE HRPVDC TV+KWILKNS
Sbjct: 222 NRKTKWCPAPGCDYAVDFIVGSGSYDVTCRCAYSFCWNCTEEAHRPVDCGTVAKWILKNS 281
Query: 1321 AESENVNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGY 1142
AESEN+NWILANSKPCPKCKRPIEKN GCMH+TCTPPCKF+FC LCLG+W+DHG RTGG+
Sbjct: 282 AESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCRLCLGAWSDHGERTGGF 341
Query: 1141 YSCNRYAAAKKDGEYEESEKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVH 962
Y+CNRY AK++G Y+ESEKRREMAK SLERYTHYYERWATN SSR KA+ +LQ+MQ VH
Sbjct: 342 YACNRYETAKQEGVYDESEKRREMAKNSLERYTHYYERWATNQSSRQKALADLQQMQNVH 401
Query: 961 IEKLIDEQCQLKSQLKFITDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQA 782
+EKL D QCQ +SQLKFI +AWLQI+ECRRVLKWTYAYGYYLPE E KR FFEY+QG+A
Sbjct: 402 LEKLSDIQCQPESQLKFIIEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRMFFEYVQGEA 461
Query: 781 ESGLERLHKCAEKDLAVYLDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADV 602
ESGLERLH+CAEK+L +YL+ EGPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DV
Sbjct: 462 ESGLERLHQCAEKELQIYLNAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDV 521
Query: 601 DSHSACXXXXXXXXXXXXXXXXXXXXXXXXXXSNGDGQSQENHNQDNHSQENQGSWTCEH 422
DSH C G G S + + + ++ G W+CEH
Sbjct: 522 DSHGTC--------SRTASSKSLGGGSSRARAGRGKG-STSRSSGPSRNIDDPGHWSCEH 572
Query: 421 CTYLNDQPATICLMCNR 371
CT+ N +PATIC MC +
Sbjct: 573 CTFANIKPATICAMCQQ 589
>ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|222852021|gb|EEE89568.1|
predicted protein [Populus trichocarpa]
Length = 591
Score = 825 bits (2131), Expect = 0.0
Identities = 375/557 (67%), Positives = 443/557 (79%), Gaps = 1/557 (0%)
Frame = -1
Query: 2038 YIENNDVDFDDTIS-RKQKNYTVLSEEDIRHLQEEDITRICAVLSISRVSAAILLCNYNW 1862
+I+N+ D DD IS R Q+NYT+LSE DIR Q++DI RI VLSIS+V+A ILL YNW
Sbjct: 42 FIDNDSDDSDDLISHRYQQNYTILSEGDIRQRQDDDIMRIATVLSISKVAATILLRYYNW 101
Query: 1861 SVSNVHDAWFADEENVRKTVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFC 1682
SVS VHD WFADEE VR+ VGL+E+PVV +P +++TCGICF+ Y + + CGH FC
Sbjct: 102 SVSKVHDEWFADEEKVRRAVGLLEEPVVPFPDGREMTCGICFETYPSDRLRAVVCGHAFC 161
Query: 1681 TTCWKGYISTSINDGPGCLILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEA 1502
+CW GYIST+INDGPGCL+LRCPDPSC AVGQ+MI++L S+E DKYSRY +RSY+E
Sbjct: 162 NSCWAGYISTAINDGPGCLMLRCPDPSCNAAVGQDMINVLTSNEDSDKYSRYFIRSYIED 221
Query: 1501 NRKTKWCPAPGCEYAVDFIVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNS 1322
NRKTKWCPAPGC+YAVDFIVGSG+YDV+C C Y+FCWNC EE HRPVDC TV+KWILKNS
Sbjct: 222 NRKTKWCPAPGCDYAVDFIVGSGSYDVICRCAYSFCWNCTEEAHRPVDCGTVAKWILKNS 281
Query: 1321 AESENVNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGY 1142
AESEN+NWILANSKPCPKCKRPIEKN GCMH+TCTPPCKF+FCWLCLG+W+DHG RTGG+
Sbjct: 282 AESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGF 341
Query: 1141 YSCNRYAAAKKDGEYEESEKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVH 962
Y+CNRY AK++G Y+++EKRREMAK SLERYTHYYERWATN +SR KA+ +LQ+MQ VH
Sbjct: 342 YACNRYETAKQEGVYDDTEKRREMAKNSLERYTHYYERWATNQTSRQKALADLQQMQNVH 401
Query: 961 IEKLIDEQCQLKSQLKFITDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQA 782
+EKL D QCQ +SQLKFI +AWLQI+ECRRVLKWTYAYGYYLPE E KR FFEYLQG+A
Sbjct: 402 LEKLSDIQCQPESQLKFIIEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRLFFEYLQGEA 461
Query: 781 ESGLERLHKCAEKDLAVYLDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADV 602
ESGLERLH+CAEK+L +YL+ EGPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DV
Sbjct: 462 ESGLERLHQCAEKELQIYLNAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDV 521
Query: 601 DSHSACXXXXXXXXXXXXXXXXXXXXXXXXXXSNGDGQSQENHNQDNHSQENQGSWTCEH 422
DSH AC G G + + + E G W+CE+
Sbjct: 522 DSHGAC--------SRMASSKSLGGGSSRARAGRGKGSTSRSSGPSRNIDE-PGHWSCEY 572
Query: 421 CTYLNDQPATICLMCNR 371
CT+ N +PATIC MC +
Sbjct: 573 CTFANIKPATICAMCQQ 589