BLASTX nr result

ID: Coptis25_contig00004000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004000
         (1522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35824.3| unnamed protein product [Vitis vinifera]              171   5e-40
ref|XP_003632758.1| PREDICTED: uncharacterized protein LOC100241...   171   5e-40
ref|XP_004155903.1| PREDICTED: uncharacterized LOC101208469 [Cuc...   152   2e-34
ref|XP_003528651.1| PREDICTED: uncharacterized protein LOC100812...   152   2e-34
ref|XP_002529179.1| transcription factor, putative [Ricinus comm...   149   3e-33

>emb|CBI35824.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  171 bits (433), Expect = 5e-40
 Identities = 95/161 (59%), Positives = 108/161 (67%), Gaps = 11/161 (6%)
 Frame = -2

Query: 1230 VEEEKEIQQ-----------THENGRSVLTLQPVTVASIPSPQNTLTLALPIQHPRATAV 1084
            +E+++EIQ               NGR       VTVA+ P PQNTLTLALPIQ  R TA 
Sbjct: 1    MEDDEEIQSHPSPDTGSPASPRSNGRIT-----VTVAAAPPPQNTLTLALPIQQAR-TAG 54

Query: 1083 AXXXXXXGREDCWSEGATSILIDAWGERYLELSRGNLKQKHWREVADIVSSRQDYSKPAK 904
                   GREDCWSEGATS+LIDAWGERYLELSRGNLKQKHW++VADIVSSR+DY+K AK
Sbjct: 55   NGGGGGGGREDCWSEGATSVLIDAWGERYLELSRGNLKQKHWKDVADIVSSREDYTKTAK 114

Query: 903  TDVQCKNRIDTCXXXXXXXXXXXASGQGTSKWIFFHRLDRL 781
            TD+QCKNRIDT            A+G G SKW F+ RLD L
Sbjct: 115  TDIQCKNRIDTVKKKYKLEKAKIAAGGGPSKWPFYQRLDHL 155



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 35/72 (48%), Positives = 47/72 (65%)
 Frame = -2

Query: 555 ETVSNKRLRFEENVNSELPKTDSGTSKRNAGKGNSWANSLRELSQAISEFGEAYERAETT 376
           ET   KR R +  +NS  P+              +W+NS+REL+QAI +FGEAYE+AET+
Sbjct: 207 ETFERKRPRMQRELNSNTPRN------------KNWSNSVRELTQAILKFGEAYEQAETS 254

Query: 375 KLQQVVEMEKQR 340
           KLQQV +ME+QR
Sbjct: 255 KLQQVADMERQR 266


>ref|XP_003632758.1| PREDICTED: uncharacterized protein LOC100241240 [Vitis vinifera]
          Length = 364

 Score =  171 bits (433), Expect = 5e-40
 Identities = 95/161 (59%), Positives = 108/161 (67%), Gaps = 11/161 (6%)
 Frame = -2

Query: 1230 VEEEKEIQQ-----------THENGRSVLTLQPVTVASIPSPQNTLTLALPIQHPRATAV 1084
            +E+++EIQ               NGR       VTVA+ P PQNTLTLALPIQ  R TA 
Sbjct: 1    MEDDEEIQSHPSPDTGSPASPRSNGRIT-----VTVAAAPPPQNTLTLALPIQQAR-TAG 54

Query: 1083 AXXXXXXGREDCWSEGATSILIDAWGERYLELSRGNLKQKHWREVADIVSSRQDYSKPAK 904
                   GREDCWSEGATS+LIDAWGERYLELSRGNLKQKHW++VADIVSSR+DY+K AK
Sbjct: 55   NGGGGGGGREDCWSEGATSVLIDAWGERYLELSRGNLKQKHWKDVADIVSSREDYTKTAK 114

Query: 903  TDVQCKNRIDTCXXXXXXXXXXXASGQGTSKWIFFHRLDRL 781
            TD+QCKNRIDT            A+G G SKW F+ RLD L
Sbjct: 115  TDIQCKNRIDTVKKKYKLEKAKIAAGGGPSKWPFYQRLDHL 155



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
 Frame = -2

Query: 555 ETVSNKRLRFEENVNSELPKTDSGTSKRNAGKGN--------SWANSLRELSQAISEFGE 400
           ET   KR R +  +NS  P++    S+   G G         +W+NS+REL+QAI +FGE
Sbjct: 233 ETFERKRPRMQRELNSNTPRSAPVRSRGGGGGGGGGGSAADKNWSNSVRELTQAILKFGE 292

Query: 399 AYERAETTKLQQVVEMEKQR 340
           AYE+AET+KLQQV +ME+QR
Sbjct: 293 AYEQAETSKLQQVADMERQR 312


>ref|XP_004155903.1| PREDICTED: uncharacterized LOC101208469 [Cucumis sativus]
          Length = 373

 Score =  152 bits (385), Expect = 2e-34
 Identities = 81/139 (58%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
 Frame = -2

Query: 1194 NGRSVLTLQPVTVASIP-SPQNTLTLALPIQHPRATAVAXXXXXXGREDCWSEGATSILI 1018
            NGR  +T+  V     P S QN +TLALP Q  +           GREDCWSEGATS+LI
Sbjct: 24   NGRITVTVAAVAPPPPPPSSQNMITLALPNQQSKGGG--GGSGGGGREDCWSEGATSVLI 81

Query: 1017 DAWGERYLELSRGNLKQKHWREVADIVSSRQDYSKPAKTDVQCKNRIDTCXXXXXXXXXX 838
            DAWGERYLELSRGNLKQKHW+EVADIVSSR+DY+K  +TD+QCKNRIDT           
Sbjct: 82   DAWGERYLELSRGNLKQKHWKEVADIVSSREDYTKIPRTDIQCKNRIDTVKKKYKTEKAK 141

Query: 837  XASGQGTSKWIFFHRLDRL 781
              +G G SKW F+ RLD+L
Sbjct: 142  ITAGGGPSKWPFYDRLDQL 160



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = -2

Query: 525 EENVNSELPKTDSGTSKRNAGKGNSWANSLRELSQAISEFGEAYERAETTKLQQVVEMEK 346
           +E VN  L KT+ G   +N  +   W N++ EL+QAI +FGEAYE+AE++KLQQVVEMEK
Sbjct: 264 KEAVNPNLGKTEKG---KNGSREKGWGNAVSELAQAILKFGEAYEQAESSKLQQVVEMEK 320

Query: 345 QR 340
           QR
Sbjct: 321 QR 322


>ref|XP_003528651.1| PREDICTED: uncharacterized protein LOC100812599 [Glycine max]
          Length = 368

 Score =  152 bits (385), Expect = 2e-34
 Identities = 81/138 (58%), Positives = 94/138 (68%)
 Frame = -2

Query: 1194 NGRSVLTLQPVTVASIPSPQNTLTLALPIQHPRATAVAXXXXXXGREDCWSEGATSILID 1015
            NGR  +T   V   + P P N+L LALPIQ P            GREDCWSEGAT++LID
Sbjct: 25   NGRITVT---VAAPAPPPPPNSLALALPIQQPAKGNGGGGGGGGGREDCWSEGATAVLID 81

Query: 1014 AWGERYLELSRGNLKQKHWREVADIVSSRQDYSKPAKTDVQCKNRIDTCXXXXXXXXXXX 835
            AWGERYLELSRGNLKQKHW+EVADIVS R+DY+K  KTD+QCKNRIDT            
Sbjct: 82   AWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKI 141

Query: 834  ASGQGTSKWIFFHRLDRL 781
            A+G  TSKW F+ RL++L
Sbjct: 142  AAG-ATSKWPFYDRLEQL 158



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = -2

Query: 495 TDSGTSKRNAGKGNSWANSLRELSQAISEFGEAYERAETTKLQQVVEMEKQR 340
           T  G+ +R   KG  W +++REL+QAI +FGEAYE+AE++KLQQVVEMEKQR
Sbjct: 263 TTKGSGERRKAKG--WGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQR 312


>ref|XP_002529179.1| transcription factor, putative [Ricinus communis]
            gi|223531357|gb|EEF33193.1| transcription factor,
            putative [Ricinus communis]
          Length = 422

 Score =  149 bits (375), Expect = 3e-33
 Identities = 87/180 (48%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
 Frame = -2

Query: 1302 NSTHLSVSLPLIRSQASFIHTMDEVEEEKEIQQTHENGRSVLTLQPVTVASIPSPQ---- 1135
            NS H S S+PL             ++ + +   +  NGR  +T+    VA     Q    
Sbjct: 86   NSNH-SQSIPL------------HIQSQSQTSPSPSNGRITVTVAAAAVAEPQQQQQQKN 132

Query: 1134 NTLTLALPIQH--PRATAVAXXXXXXGREDCWSEGATSILIDAWGERYLELSRGNLKQKH 961
            N   +   IQ   P++          GREDCWSEGAT +LIDAWGERYLELSRGNLKQKH
Sbjct: 133  NLAVIPFQIQQQPPKSNG-------GGREDCWSEGATGVLIDAWGERYLELSRGNLKQKH 185

Query: 960  WREVADIVSSRQDYSKPAKTDVQCKNRIDTCXXXXXXXXXXXASGQGTSKWIFFHRLDRL 781
            W+EVADIVSSR+DY+K AKTD+QCKNRIDT            A+G G SKW FF RLD+L
Sbjct: 186  WKEVADIVSSREDYTKSAKTDIQCKNRIDTVKKKYKLEKAKIAAGAGPSKWPFFQRLDQL 245


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