BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003992
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002536345.1| conserved hypothetical protein [Ricinus comm...   141   9e-42
ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|...    81   7e-34
emb|CBI39408.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002489092.1| hypothetical protein SORBIDRAFT_0088s002240 ...    66   3e-09
emb|CAN79212.1| hypothetical protein VITISV_025938 [Vitis vinifera]    52   8e-06

>ref|XP_002536345.1| conserved hypothetical protein [Ricinus communis]
           gi|223520024|gb|EEF26037.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  141 bits (355), Expect(2) = 9e-42
 Identities = 65/72 (90%), Positives = 67/72 (93%)
 Frame = +1

Query: 133 KWPCCTSLPSSMGSALSFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPLRPKT 312
           KWPCCTSL SSMGSAL FLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKP R KT
Sbjct: 28  KWPCCTSLSSSMGSALFFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPFRLKT 87

Query: 313 TGKWSCGAFGEG 348
           +G+WS GAFGEG
Sbjct: 88  SGRWSRGAFGEG 99



 Score = 54.3 bits (129), Expect(2) = 9e-42
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 57  RKANCLLAGSCMSGNVHVRLREKGG 131
           RKANCLLAGSCMSGNVHVR REKGG
Sbjct: 1   RKANCLLAGSCMSGNVHVRFREKGG 25


>ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|gb|AES58602.1| Maturase
           [Medicago truncatula]
          Length = 996

 Score = 81.3 bits (199), Expect(3) = 7e-34
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = +1

Query: 133 KWPCCTSLPSSMGSALSFLGEYANMILMRCGALHLTFVG 249
           KWPCCTSL SSMGSAL FLGEYANMILMRCGALHLTFVG
Sbjct: 51  KWPCCTSLSSSMGSALFFLGEYANMILMRCGALHLTFVG 89



 Score = 58.5 bits (140), Expect(3) = 7e-34
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +2

Query: 359 VSTAMNHGESSDDLSKIRGEILSSGDPFTLP 451
           V TAMN GE SDDLSKIRGEILSSGDPFTLP
Sbjct: 88  VGTAMNRGEPSDDLSKIRGEILSSGDPFTLP 118



 Score = 49.7 bits (117), Expect(3) = 7e-34
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +3

Query: 57  RKANCLLAGSCMSGNVHVRLREKGG 131
           R+A+CL AGSCMSGNVHVRLREKGG
Sbjct: 24  READCLPAGSCMSGNVHVRLREKGG 48


>emb|CBI39408.3| unnamed protein product [Vitis vinifera]
          Length = 147

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/57 (66%), Positives = 44/57 (77%)
 Frame = +1

Query: 148 TSLPSSMGSALSFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPLRPKTTG 318
           T + + + S   F  EYANMILMRCGALHLTF+GLPS GACV AFLCNKPL+ +T G
Sbjct: 23  TPIFNGVCSIFIFFWEYANMILMRCGALHLTFIGLPSLGACVLAFLCNKPLQSETNG 79



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/33 (81%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
 Frame = +3

Query: 90  MSGNVHVRLREKG-GEMALLYLTPVFNGVCSFF 185
           MSGNVHVRLREKG G   LLYLTP+FNGVCS F
Sbjct: 1   MSGNVHVRLREKGDGIKTLLYLTPIFNGVCSIF 33


>ref|XP_002489092.1| hypothetical protein SORBIDRAFT_0088s002240 [Sorghum bicolor]
           gi|241947412|gb|EES20557.1| hypothetical protein
           SORBIDRAFT_0088s002240 [Sorghum bicolor]
          Length = 58

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 125 LLAEPYVDVTAHTAPSQQAVSLPLQGMEVWMNRHQ 21
           LL EPYVDVTAHTAPSQQAVS PL+ MEVW+NRHQ
Sbjct: 10  LLTEPYVDVTAHTAPSQQAVSFPLEVMEVWINRHQ 44


>emb|CAN79212.1| hypothetical protein VITISV_025938 [Vitis vinifera]
          Length = 338

 Score = 52.4 bits (124), Expect(2) = 8e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +2

Query: 272 SRRFCAINPSGRRLLVSGPAELSEKGS 352
           SRRFCAINP GRRL+V GPAELSEKGS
Sbjct: 2   SRRFCAINPPGRRLVVGGPAELSEKGS 28



 Score = 21.9 bits (45), Expect(2) = 8e-06
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 343 EG*LVCKHSNE 375
           +G LVCKH+NE
Sbjct: 26  KGSLVCKHNNE 36