BLASTX nr result
ID: Coptis25_contig00003992
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003992 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002536345.1| conserved hypothetical protein [Ricinus comm... 141 9e-42 ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|... 81 7e-34 emb|CBI39408.3| unnamed protein product [Vitis vinifera] 80 2e-13 ref|XP_002489092.1| hypothetical protein SORBIDRAFT_0088s002240 ... 66 3e-09 emb|CAN79212.1| hypothetical protein VITISV_025938 [Vitis vinifera] 52 8e-06 >ref|XP_002536345.1| conserved hypothetical protein [Ricinus communis] gi|223520024|gb|EEF26037.1| conserved hypothetical protein [Ricinus communis] Length = 99 Score = 141 bits (355), Expect(2) = 9e-42 Identities = 65/72 (90%), Positives = 67/72 (93%) Frame = +1 Query: 133 KWPCCTSLPSSMGSALSFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPLRPKT 312 KWPCCTSL SSMGSAL FLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKP R KT Sbjct: 28 KWPCCTSLSSSMGSALFFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPFRLKT 87 Query: 313 TGKWSCGAFGEG 348 +G+WS GAFGEG Sbjct: 88 SGRWSRGAFGEG 99 Score = 54.3 bits (129), Expect(2) = 9e-42 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = +3 Query: 57 RKANCLLAGSCMSGNVHVRLREKGG 131 RKANCLLAGSCMSGNVHVR REKGG Sbjct: 1 RKANCLLAGSCMSGNVHVRFREKGG 25 >ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|gb|AES58602.1| Maturase [Medicago truncatula] Length = 996 Score = 81.3 bits (199), Expect(3) = 7e-34 Identities = 37/39 (94%), Positives = 37/39 (94%) Frame = +1 Query: 133 KWPCCTSLPSSMGSALSFLGEYANMILMRCGALHLTFVG 249 KWPCCTSL SSMGSAL FLGEYANMILMRCGALHLTFVG Sbjct: 51 KWPCCTSLSSSMGSALFFLGEYANMILMRCGALHLTFVG 89 Score = 58.5 bits (140), Expect(3) = 7e-34 Identities = 28/31 (90%), Positives = 28/31 (90%) Frame = +2 Query: 359 VSTAMNHGESSDDLSKIRGEILSSGDPFTLP 451 V TAMN GE SDDLSKIRGEILSSGDPFTLP Sbjct: 88 VGTAMNRGEPSDDLSKIRGEILSSGDPFTLP 118 Score = 49.7 bits (117), Expect(3) = 7e-34 Identities = 22/25 (88%), Positives = 24/25 (96%) Frame = +3 Query: 57 RKANCLLAGSCMSGNVHVRLREKGG 131 R+A+CL AGSCMSGNVHVRLREKGG Sbjct: 24 READCLPAGSCMSGNVHVRLREKGG 48 >emb|CBI39408.3| unnamed protein product [Vitis vinifera] Length = 147 Score = 80.1 bits (196), Expect = 2e-13 Identities = 38/57 (66%), Positives = 44/57 (77%) Frame = +1 Query: 148 TSLPSSMGSALSFLGEYANMILMRCGALHLTFVGLPSSGACVPAFLCNKPLRPKTTG 318 T + + + S F EYANMILMRCGALHLTF+GLPS GACV AFLCNKPL+ +T G Sbjct: 23 TPIFNGVCSIFIFFWEYANMILMRCGALHLTFIGLPSLGACVLAFLCNKPLQSETNG 79 Score = 55.5 bits (132), Expect = 5e-06 Identities = 27/33 (81%), Positives = 28/33 (84%), Gaps = 1/33 (3%) Frame = +3 Query: 90 MSGNVHVRLREKG-GEMALLYLTPVFNGVCSFF 185 MSGNVHVRLREKG G LLYLTP+FNGVCS F Sbjct: 1 MSGNVHVRLREKGDGIKTLLYLTPIFNGVCSIF 33 >ref|XP_002489092.1| hypothetical protein SORBIDRAFT_0088s002240 [Sorghum bicolor] gi|241947412|gb|EES20557.1| hypothetical protein SORBIDRAFT_0088s002240 [Sorghum bicolor] Length = 58 Score = 66.2 bits (160), Expect = 3e-09 Identities = 30/35 (85%), Positives = 32/35 (91%) Frame = -3 Query: 125 LLAEPYVDVTAHTAPSQQAVSLPLQGMEVWMNRHQ 21 LL EPYVDVTAHTAPSQQAVS PL+ MEVW+NRHQ Sbjct: 10 LLTEPYVDVTAHTAPSQQAVSFPLEVMEVWINRHQ 44 >emb|CAN79212.1| hypothetical protein VITISV_025938 [Vitis vinifera] Length = 338 Score = 52.4 bits (124), Expect(2) = 8e-06 Identities = 24/27 (88%), Positives = 25/27 (92%) Frame = +2 Query: 272 SRRFCAINPSGRRLLVSGPAELSEKGS 352 SRRFCAINP GRRL+V GPAELSEKGS Sbjct: 2 SRRFCAINPPGRRLVVGGPAELSEKGS 28 Score = 21.9 bits (45), Expect(2) = 8e-06 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +1 Query: 343 EG*LVCKHSNE 375 +G LVCKH+NE Sbjct: 26 KGSLVCKHNNE 36