BLASTX nr result

ID: Coptis25_contig00003990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003990
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276750.2| PREDICTED: uncharacterized protein LOC100245...    72   3e-10
emb|CBI21990.3| unnamed protein product [Vitis vinifera]               72   3e-10
emb|CAN81695.1| hypothetical protein VITISV_042576 [Vitis vinifera]    72   3e-10
ref|XP_002305742.1| predicted protein [Populus trichocarpa] gi|2...    71   5e-10
ref|XP_002320413.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09

>ref|XP_002276750.2| PREDICTED: uncharacterized protein LOC100245463 [Vitis vinifera]
          Length = 678

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 38/62 (61%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
 Frame = -3

Query: 384 SQFPLAPPLPKSPSESWLWRTLPSVSSKNSAAFHS-----RKQCSKPPSVGQTWETIVKT 220
           S+ PL PPLPKSPSESWL RTLPS SS+NS +  +     R Q SK  S    WETIVKT
Sbjct: 598 SELPLPPPLPKSPSESWLSRTLPSASSRNSQSHFATWTSPRNQASKTSSPDPKWETIVKT 657

Query: 219 SN 214
           SN
Sbjct: 658 SN 659


>emb|CBI21990.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 38/62 (61%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
 Frame = -3

Query: 384 SQFPLAPPLPKSPSESWLWRTLPSVSSKNSAAFHS-----RKQCSKPPSVGQTWETIVKT 220
           S+ PL PPLPKSPSESWL RTLPS SS+NS +  +     R Q SK  S    WETIVKT
Sbjct: 561 SELPLPPPLPKSPSESWLSRTLPSASSRNSQSHFATWTSPRNQASKTSSPDPKWETIVKT 620

Query: 219 SN 214
           SN
Sbjct: 621 SN 622


>emb|CAN81695.1| hypothetical protein VITISV_042576 [Vitis vinifera]
          Length = 1185

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 38/62 (61%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
 Frame = -3

Query: 384 SQFPLAPPLPKSPSESWLWRTLPSVSSKNSAAFHS-----RKQCSKPPSVGQTWETIVKT 220
           S+ PL PPLPKSPSESWL RTLPS SS+NS +  +     R Q SK  S    WETIVKT
Sbjct: 598 SELPLPPPLPKSPSESWLSRTLPSASSRNSQSHFATWTSPRNQASKTSSPDPKWETIVKT 657

Query: 219 SN 214
           SN
Sbjct: 658 SN 659


>ref|XP_002305742.1| predicted protein [Populus trichocarpa] gi|222848706|gb|EEE86253.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 37/62 (59%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
 Frame = -3

Query: 381 QFPLAPPLPKSPSESWLWRTLPSVSSKNS-------AAFHSRKQCSKPPSVGQTWETIVK 223
           Q PLAP LPKSPSESWLWRTLPS SS+NS        +F S+ Q +  PS    WETIVK
Sbjct: 651 QSPLAPILPKSPSESWLWRTLPSFSSQNSLSHLHRGTSFQSKWQDTNTPSTNTKWETIVK 710

Query: 222 TS 217
           +S
Sbjct: 711 SS 712


>ref|XP_002320413.1| predicted protein [Populus trichocarpa] gi|222861186|gb|EEE98728.1|
           predicted protein [Populus trichocarpa]
          Length = 692

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 7/65 (10%)
 Frame = -3

Query: 384 SQFPLAPPLPKSPSESWLWRTLPSVSSKNSAA-------FHSRKQCSKPPSVGQTWETIV 226
           +Q  L PPLPKSPSESWL RTLP VSS+NS++        HSR Q SK  S    WETIV
Sbjct: 610 TQLLLPPPLPKSPSESWLKRTLPIVSSRNSSSRSPLGMHLHSRVQASKTLSDDPKWETIV 669

Query: 225 KTSNV 211
           +T+N+
Sbjct: 670 RTANI 674


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