BLASTX nr result
ID: Coptis25_contig00003990
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003990 (1157 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276750.2| PREDICTED: uncharacterized protein LOC100245... 72 3e-10 emb|CBI21990.3| unnamed protein product [Vitis vinifera] 72 3e-10 emb|CAN81695.1| hypothetical protein VITISV_042576 [Vitis vinifera] 72 3e-10 ref|XP_002305742.1| predicted protein [Populus trichocarpa] gi|2... 71 5e-10 ref|XP_002320413.1| predicted protein [Populus trichocarpa] gi|2... 69 2e-09 >ref|XP_002276750.2| PREDICTED: uncharacterized protein LOC100245463 [Vitis vinifera] Length = 678 Score = 72.0 bits (175), Expect = 3e-10 Identities = 38/62 (61%), Positives = 42/62 (67%), Gaps = 5/62 (8%) Frame = -3 Query: 384 SQFPLAPPLPKSPSESWLWRTLPSVSSKNSAAFHS-----RKQCSKPPSVGQTWETIVKT 220 S+ PL PPLPKSPSESWL RTLPS SS+NS + + R Q SK S WETIVKT Sbjct: 598 SELPLPPPLPKSPSESWLSRTLPSASSRNSQSHFATWTSPRNQASKTSSPDPKWETIVKT 657 Query: 219 SN 214 SN Sbjct: 658 SN 659 >emb|CBI21990.3| unnamed protein product [Vitis vinifera] Length = 641 Score = 72.0 bits (175), Expect = 3e-10 Identities = 38/62 (61%), Positives = 42/62 (67%), Gaps = 5/62 (8%) Frame = -3 Query: 384 SQFPLAPPLPKSPSESWLWRTLPSVSSKNSAAFHS-----RKQCSKPPSVGQTWETIVKT 220 S+ PL PPLPKSPSESWL RTLPS SS+NS + + R Q SK S WETIVKT Sbjct: 561 SELPLPPPLPKSPSESWLSRTLPSASSRNSQSHFATWTSPRNQASKTSSPDPKWETIVKT 620 Query: 219 SN 214 SN Sbjct: 621 SN 622 >emb|CAN81695.1| hypothetical protein VITISV_042576 [Vitis vinifera] Length = 1185 Score = 72.0 bits (175), Expect = 3e-10 Identities = 38/62 (61%), Positives = 42/62 (67%), Gaps = 5/62 (8%) Frame = -3 Query: 384 SQFPLAPPLPKSPSESWLWRTLPSVSSKNSAAFHS-----RKQCSKPPSVGQTWETIVKT 220 S+ PL PPLPKSPSESWL RTLPS SS+NS + + R Q SK S WETIVKT Sbjct: 598 SELPLPPPLPKSPSESWLSRTLPSASSRNSQSHFATWTSPRNQASKTSSPDPKWETIVKT 657 Query: 219 SN 214 SN Sbjct: 658 SN 659 >ref|XP_002305742.1| predicted protein [Populus trichocarpa] gi|222848706|gb|EEE86253.1| predicted protein [Populus trichocarpa] Length = 735 Score = 71.2 bits (173), Expect = 5e-10 Identities = 37/62 (59%), Positives = 42/62 (67%), Gaps = 7/62 (11%) Frame = -3 Query: 381 QFPLAPPLPKSPSESWLWRTLPSVSSKNS-------AAFHSRKQCSKPPSVGQTWETIVK 223 Q PLAP LPKSPSESWLWRTLPS SS+NS +F S+ Q + PS WETIVK Sbjct: 651 QSPLAPILPKSPSESWLWRTLPSFSSQNSLSHLHRGTSFQSKWQDTNTPSTNTKWETIVK 710 Query: 222 TS 217 +S Sbjct: 711 SS 712 >ref|XP_002320413.1| predicted protein [Populus trichocarpa] gi|222861186|gb|EEE98728.1| predicted protein [Populus trichocarpa] Length = 692 Score = 69.3 bits (168), Expect = 2e-09 Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 7/65 (10%) Frame = -3 Query: 384 SQFPLAPPLPKSPSESWLWRTLPSVSSKNSAA-------FHSRKQCSKPPSVGQTWETIV 226 +Q L PPLPKSPSESWL RTLP VSS+NS++ HSR Q SK S WETIV Sbjct: 610 TQLLLPPPLPKSPSESWLKRTLPIVSSRNSSSRSPLGMHLHSRVQASKTLSDDPKWETIV 669 Query: 225 KTSNV 211 +T+N+ Sbjct: 670 RTANI 674